Experiment: Gly-Glu (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS21775 and ABID97_RS21780 are separated by 25 nucleotides ABID97_RS21780 and ABID97_RS21785 are separated by 393 nucleotides ABID97_RS21785 and ABID97_RS21790 are separated by 1 nucleotides ABID97_RS21790 and ABID97_RS21795 overlap by 8 nucleotides
ABID97_RS21775: ABID97_RS21775 - class 1 fructose-bisphosphatase, at 4,502,578 to 4,503,594
_RS21775
ABID97_RS21780: ABID97_RS21780 - tRNA-Thr, at 4,503,620 to 4,503,695
_RS21780
ABID97_RS21785: ABID97_RS21785 - ATP-binding protein, at 4,504,089 to 4,505,714
_RS21785
ABID97_RS21790: ABID97_RS21790 - hypothetical protein, at 4,505,716 to 4,506,540
_RS21790
ABID97_RS21795: ABID97_RS21795 - DEAD/DEAH box helicase, at 4,506,533 to 4,508,356
_RS21795
Position (kb) 4504
4505
4506 Strain fitness (log2 ratio) -1
0
1 at 4503.785 kb on + strand at 4503.785 kb on + strand at 4503.786 kb on - strand at 4503.796 kb on + strand at 4503.799 kb on + strand at 4503.917 kb on + strand at 4503.917 kb on + strand at 4503.918 kb on - strand at 4503.918 kb on - strand at 4503.922 kb on + strand at 4504.152 kb on + strand at 4504.152 kb on + strand at 4504.159 kb on + strand at 4504.159 kb on + strand at 4504.160 kb on - strand at 4504.160 kb on - strand at 4504.261 kb on - strand, within ABID97_RS21785 at 4504.283 kb on + strand, within ABID97_RS21785 at 4504.302 kb on + strand, within ABID97_RS21785 at 4504.393 kb on + strand, within ABID97_RS21785 at 4504.393 kb on + strand, within ABID97_RS21785 at 4504.393 kb on + strand, within ABID97_RS21785 at 4504.413 kb on - strand, within ABID97_RS21785 at 4504.564 kb on + strand, within ABID97_RS21785 at 4504.564 kb on + strand, within ABID97_RS21785 at 4504.684 kb on - strand, within ABID97_RS21785 at 4504.748 kb on + strand, within ABID97_RS21785 at 4504.750 kb on + strand, within ABID97_RS21785 at 4504.754 kb on + strand, within ABID97_RS21785 at 4504.755 kb on - strand, within ABID97_RS21785 at 4504.950 kb on + strand, within ABID97_RS21785 at 4504.950 kb on + strand, within ABID97_RS21785 at 4504.951 kb on - strand, within ABID97_RS21785 at 4504.951 kb on - strand, within ABID97_RS21785 at 4504.956 kb on + strand, within ABID97_RS21785 at 4504.956 kb on + strand, within ABID97_RS21785 at 4505.062 kb on + strand, within ABID97_RS21785 at 4505.201 kb on + strand, within ABID97_RS21785 at 4505.201 kb on + strand, within ABID97_RS21785 at 4505.201 kb on + strand, within ABID97_RS21785 at 4505.377 kb on + strand, within ABID97_RS21785 at 4505.378 kb on - strand, within ABID97_RS21785 at 4505.378 kb on - strand, within ABID97_RS21785 at 4505.378 kb on - strand, within ABID97_RS21785 at 4505.396 kb on + strand, within ABID97_RS21785 at 4505.396 kb on + strand, within ABID97_RS21785 at 4505.397 kb on - strand, within ABID97_RS21785 at 4505.551 kb on + strand, within ABID97_RS21785 at 4505.588 kb on + strand at 4505.666 kb on + strand at 4506.081 kb on + strand, within ABID97_RS21790 at 4506.119 kb on + strand, within ABID97_RS21790 at 4506.119 kb on + strand, within ABID97_RS21790 at 4506.191 kb on + strand, within ABID97_RS21790 at 4506.191 kb on + strand, within ABID97_RS21790 at 4506.191 kb on + strand, within ABID97_RS21790 at 4506.192 kb on - strand, within ABID97_RS21790 at 4506.192 kb on - strand, within ABID97_RS21790 at 4506.192 kb on - strand, within ABID97_RS21790 at 4506.192 kb on - strand, within ABID97_RS21790 at 4506.252 kb on - strand, within ABID97_RS21790 at 4506.284 kb on + strand, within ABID97_RS21790 at 4506.285 kb on - strand, within ABID97_RS21790 at 4506.285 kb on - strand, within ABID97_RS21790 at 4506.285 kb on - strand, within ABID97_RS21790 at 4506.346 kb on + strand, within ABID97_RS21790 at 4506.419 kb on - strand, within ABID97_RS21790 at 4506.510 kb on - strand at 4506.510 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (C) remove 4,503,785 + -0.0 4,503,785 + +0.4 4,503,786 - +0.3 4,503,796 + +0.8 4,503,799 + -0.4 4,503,917 + +0.3 4,503,917 + +0.2 4,503,918 - +0.1 4,503,918 - -0.1 4,503,922 + -0.1 4,504,152 + +0.1 4,504,152 + -0.4 4,504,159 + -0.3 4,504,159 + +0.2 4,504,160 - -0.7 4,504,160 - +0.3 4,504,261 - ABID97_RS21785 0.11 -0.5 4,504,283 + ABID97_RS21785 0.12 +0.3 4,504,302 + ABID97_RS21785 0.13 +1.6 4,504,393 + ABID97_RS21785 0.19 -0.0 4,504,393 + ABID97_RS21785 0.19 +0.2 4,504,393 + ABID97_RS21785 0.19 +0.5 4,504,413 - ABID97_RS21785 0.20 +0.5 4,504,564 + ABID97_RS21785 0.29 +0.4 4,504,564 + ABID97_RS21785 0.29 -0.1 4,504,684 - ABID97_RS21785 0.37 +0.5 4,504,748 + ABID97_RS21785 0.41 +0.2 4,504,750 + ABID97_RS21785 0.41 -1.1 4,504,754 + ABID97_RS21785 0.41 -0.2 4,504,755 - ABID97_RS21785 0.41 +0.6 4,504,950 + ABID97_RS21785 0.53 +1.0 4,504,950 + ABID97_RS21785 0.53 +0.1 4,504,951 - ABID97_RS21785 0.53 +0.3 4,504,951 - ABID97_RS21785 0.53 +0.6 4,504,956 + ABID97_RS21785 0.53 +1.1 4,504,956 + ABID97_RS21785 0.53 +0.7 4,505,062 + ABID97_RS21785 0.60 -0.0 4,505,201 + ABID97_RS21785 0.68 -1.1 4,505,201 + ABID97_RS21785 0.68 +0.6 4,505,201 + ABID97_RS21785 0.68 +0.1 4,505,377 + ABID97_RS21785 0.79 +0.1 4,505,378 - ABID97_RS21785 0.79 +0.4 4,505,378 - ABID97_RS21785 0.79 -0.1 4,505,378 - ABID97_RS21785 0.79 +0.9 4,505,396 + ABID97_RS21785 0.80 +0.3 4,505,396 + ABID97_RS21785 0.80 +0.4 4,505,397 - ABID97_RS21785 0.80 -0.8 4,505,551 + ABID97_RS21785 0.90 +1.6 4,505,588 + -0.4 4,505,666 + +0.1 4,506,081 + ABID97_RS21790 0.44 -0.1 4,506,119 + ABID97_RS21790 0.49 -0.1 4,506,119 + ABID97_RS21790 0.49 +0.3 4,506,191 + ABID97_RS21790 0.58 -0.1 4,506,191 + ABID97_RS21790 0.58 +0.3 4,506,191 + ABID97_RS21790 0.58 -0.1 4,506,192 - ABID97_RS21790 0.58 +0.4 4,506,192 - ABID97_RS21790 0.58 +0.4 4,506,192 - ABID97_RS21790 0.58 +0.8 4,506,192 - ABID97_RS21790 0.58 +0.3 4,506,252 - ABID97_RS21790 0.65 +0.6 4,506,284 + ABID97_RS21790 0.69 +0.1 4,506,285 - ABID97_RS21790 0.69 +1.0 4,506,285 - ABID97_RS21790 0.69 -0.2 4,506,285 - ABID97_RS21790 0.69 +0.3 4,506,346 + ABID97_RS21790 0.76 +0.3 4,506,419 - ABID97_RS21790 0.85 +0.9 4,506,510 - +1.0 4,506,510 - -0.4
Or see this region's nucleotide sequence