Experiment: Gly-Glu (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS03460 and ABID97_RS03465 are separated by 104 nucleotides ABID97_RS03465 and ABID97_RS03470 are separated by 215 nucleotides ABID97_RS03470 and ABID97_RS03475 are separated by 52 nucleotides
ABID97_RS03460: ABID97_RS03460 - LysR family transcriptional regulator, at 703,840 to 704,757
_RS03460
ABID97_RS03465: ABID97_RS03465 - PACE efflux transporter, at 704,862 to 705,317
_RS03465
ABID97_RS03470: ABID97_RS03470 - methionine synthase, at 705,533 to 708,247
_RS03470
ABID97_RS03475: ABID97_RS03475 - hypothetical protein, at 708,300 to 710,099
_RS03475
Position (kb) 705
706
707
708
709 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 704.644 kb on + strand, within ABID97_RS03460 at 704.645 kb on - strand, within ABID97_RS03460 at 704.804 kb on - strand at 704.889 kb on + strand at 704.889 kb on + strand at 704.889 kb on + strand at 704.889 kb on + strand at 704.889 kb on + strand at 704.889 kb on + strand at 704.889 kb on + strand at 704.889 kb on + strand at 704.890 kb on - strand at 704.890 kb on - strand at 704.890 kb on - strand at 704.890 kb on - strand at 704.890 kb on - strand at 704.890 kb on - strand at 704.890 kb on - strand at 705.219 kb on + strand, within ABID97_RS03465 at 705.219 kb on + strand, within ABID97_RS03465 at 705.995 kb on + strand, within ABID97_RS03470 at 705.996 kb on - strand, within ABID97_RS03470 at 705.996 kb on - strand, within ABID97_RS03470 at 705.996 kb on - strand, within ABID97_RS03470 at 705.996 kb on - strand, within ABID97_RS03470 at 705.996 kb on - strand, within ABID97_RS03470 at 705.996 kb on - strand, within ABID97_RS03470 at 705.996 kb on - strand, within ABID97_RS03470 at 706.028 kb on + strand, within ABID97_RS03470 at 706.127 kb on + strand, within ABID97_RS03470 at 706.127 kb on + strand, within ABID97_RS03470 at 706.127 kb on + strand, within ABID97_RS03470 at 706.128 kb on - strand, within ABID97_RS03470 at 706.128 kb on - strand, within ABID97_RS03470 at 706.128 kb on - strand, within ABID97_RS03470 at 706.128 kb on - strand, within ABID97_RS03470 at 706.269 kb on - strand, within ABID97_RS03470 at 706.328 kb on + strand, within ABID97_RS03470 at 706.328 kb on + strand, within ABID97_RS03470 at 706.328 kb on + strand, within ABID97_RS03470 at 706.328 kb on + strand, within ABID97_RS03470 at 706.568 kb on + strand, within ABID97_RS03470 at 706.569 kb on - strand, within ABID97_RS03470 at 706.736 kb on + strand, within ABID97_RS03470 at 707.000 kb on + strand, within ABID97_RS03470 at 707.000 kb on + strand, within ABID97_RS03470 at 707.000 kb on + strand, within ABID97_RS03470 at 707.000 kb on + strand, within ABID97_RS03470 at 707.000 kb on + strand, within ABID97_RS03470 at 707.000 kb on + strand, within ABID97_RS03470 at 707.001 kb on - strand, within ABID97_RS03470 at 707.001 kb on - strand, within ABID97_RS03470 at 707.001 kb on - strand, within ABID97_RS03470 at 707.001 kb on - strand, within ABID97_RS03470 at 707.115 kb on - strand, within ABID97_RS03470 at 707.115 kb on - strand, within ABID97_RS03470 at 707.132 kb on + strand, within ABID97_RS03470 at 707.132 kb on + strand, within ABID97_RS03470 at 707.132 kb on + strand, within ABID97_RS03470 at 707.132 kb on + strand, within ABID97_RS03470 at 707.132 kb on + strand, within ABID97_RS03470 at 707.132 kb on + strand, within ABID97_RS03470 at 707.132 kb on + strand, within ABID97_RS03470 at 707.133 kb on - strand, within ABID97_RS03470 at 707.133 kb on - strand, within ABID97_RS03470 at 707.133 kb on - strand, within ABID97_RS03470 at 707.133 kb on - strand, within ABID97_RS03470 at 707.198 kb on + strand, within ABID97_RS03470 at 707.199 kb on - strand, within ABID97_RS03470 at 707.199 kb on - strand, within ABID97_RS03470 at 707.321 kb on + strand, within ABID97_RS03470 at 707.322 kb on - strand, within ABID97_RS03470 at 707.322 kb on - strand, within ABID97_RS03470 at 707.393 kb on + strand, within ABID97_RS03470 at 707.393 kb on + strand, within ABID97_RS03470 at 707.393 kb on + strand, within ABID97_RS03470 at 707.393 kb on + strand, within ABID97_RS03470 at 707.393 kb on + strand, within ABID97_RS03470 at 707.393 kb on + strand, within ABID97_RS03470 at 707.394 kb on - strand, within ABID97_RS03470 at 707.394 kb on - strand, within ABID97_RS03470 at 707.394 kb on - strand, within ABID97_RS03470 at 707.492 kb on + strand, within ABID97_RS03470 at 707.493 kb on - strand, within ABID97_RS03470 at 707.493 kb on - strand, within ABID97_RS03470 at 707.493 kb on - strand, within ABID97_RS03470 at 707.607 kb on - strand, within ABID97_RS03470 at 707.607 kb on - strand, within ABID97_RS03470 at 707.607 kb on - strand, within ABID97_RS03470 at 707.607 kb on - strand, within ABID97_RS03470 at 707.645 kb on + strand, within ABID97_RS03470 at 707.750 kb on + strand, within ABID97_RS03470 at 707.750 kb on + strand, within ABID97_RS03470 at 707.750 kb on + strand, within ABID97_RS03470 at 707.750 kb on + strand, within ABID97_RS03470 at 707.751 kb on - strand, within ABID97_RS03470 at 707.751 kb on - strand, within ABID97_RS03470 at 707.751 kb on - strand, within ABID97_RS03470 at 707.751 kb on - strand, within ABID97_RS03470 at 707.751 kb on - strand, within ABID97_RS03470 at 707.751 kb on - strand, within ABID97_RS03470 at 707.804 kb on + strand, within ABID97_RS03470 at 707.804 kb on + strand, within ABID97_RS03470 at 707.804 kb on + strand, within ABID97_RS03470 at 707.805 kb on - strand, within ABID97_RS03470 at 707.805 kb on - strand, within ABID97_RS03470 at 707.805 kb on - strand, within ABID97_RS03470 at 707.805 kb on - strand, within ABID97_RS03470 at 707.805 kb on - strand, within ABID97_RS03470 at 707.805 kb on - strand, within ABID97_RS03470 at 707.828 kb on + strand, within ABID97_RS03470 at 707.828 kb on + strand, within ABID97_RS03470 at 707.828 kb on + strand, within ABID97_RS03470 at 707.921 kb on + strand, within ABID97_RS03470 at 707.921 kb on + strand, within ABID97_RS03470 at 707.921 kb on + strand, within ABID97_RS03470 at 707.922 kb on - strand, within ABID97_RS03470 at 708.088 kb on + strand at 708.088 kb on + strand at 708.088 kb on + strand at 708.088 kb on + strand at 708.089 kb on - strand at 708.120 kb on - strand at 708.143 kb on + strand at 708.144 kb on - strand at 708.287 kb on + strand at 708.287 kb on + strand at 708.288 kb on - strand at 708.288 kb on - strand at 708.702 kb on + strand, within ABID97_RS03475 at 708.702 kb on + strand, within ABID97_RS03475 at 708.702 kb on + strand, within ABID97_RS03475 at 708.702 kb on + strand, within ABID97_RS03475 at 708.702 kb on + strand, within ABID97_RS03475 at 708.703 kb on - strand, within ABID97_RS03475 at 708.715 kb on - strand, within ABID97_RS03475 at 708.784 kb on - strand, within ABID97_RS03475 at 708.789 kb on + strand, within ABID97_RS03475 at 708.789 kb on + strand, within ABID97_RS03475 at 708.789 kb on + strand, within ABID97_RS03475 at 708.789 kb on + strand, within ABID97_RS03475 at 708.790 kb on - strand, within ABID97_RS03475 at 708.790 kb on - strand, within ABID97_RS03475 at 708.790 kb on - strand, within ABID97_RS03475 at 708.790 kb on - strand, within ABID97_RS03475 at 708.790 kb on - strand, within ABID97_RS03475 at 708.790 kb on - strand, within ABID97_RS03475 at 708.801 kb on + strand, within ABID97_RS03475 at 708.802 kb on - strand, within ABID97_RS03475 at 708.802 kb on - strand, within ABID97_RS03475 at 708.960 kb on + strand, within ABID97_RS03475 at 708.976 kb on + strand, within ABID97_RS03475 at 708.976 kb on + strand, within ABID97_RS03475 at 708.976 kb on + strand, within ABID97_RS03475 at 708.976 kb on + strand, within ABID97_RS03475 at 708.977 kb on - strand, within ABID97_RS03475 at 709.222 kb on - strand, within ABID97_RS03475 at 709.228 kb on - strand, within ABID97_RS03475 at 709.228 kb on - strand, within ABID97_RS03475
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (C) remove 704,644 + ABID97_RS03460 0.88 +0.1 704,645 - ABID97_RS03460 0.88 -2.0 704,804 - -0.5 704,889 + -0.4 704,889 + +0.8 704,889 + -0.4 704,889 + -0.6 704,889 + +0.9 704,889 + +0.0 704,889 + -0.8 704,889 + -1.0 704,890 - -1.2 704,890 - -0.4 704,890 - -0.4 704,890 - +0.2 704,890 - -0.7 704,890 - -0.0 704,890 - -1.3 705,219 + ABID97_RS03465 0.78 -0.5 705,219 + ABID97_RS03465 0.78 -0.4 705,995 + ABID97_RS03470 0.17 +0.2 705,996 - ABID97_RS03470 0.17 -3.1 705,996 - ABID97_RS03470 0.17 -1.3 705,996 - ABID97_RS03470 0.17 -1.0 705,996 - ABID97_RS03470 0.17 -1.5 705,996 - ABID97_RS03470 0.17 -1.4 705,996 - ABID97_RS03470 0.17 -1.6 705,996 - ABID97_RS03470 0.17 -0.6 706,028 + ABID97_RS03470 0.18 -1.2 706,127 + ABID97_RS03470 0.22 -1.2 706,127 + ABID97_RS03470 0.22 -1.3 706,127 + ABID97_RS03470 0.22 -0.6 706,128 - ABID97_RS03470 0.22 -1.2 706,128 - ABID97_RS03470 0.22 -1.2 706,128 - ABID97_RS03470 0.22 -1.3 706,128 - ABID97_RS03470 0.22 +0.2 706,269 - ABID97_RS03470 0.27 -2.2 706,328 + ABID97_RS03470 0.29 -1.2 706,328 + ABID97_RS03470 0.29 -1.7 706,328 + ABID97_RS03470 0.29 -0.8 706,328 + ABID97_RS03470 0.29 -1.2 706,568 + ABID97_RS03470 0.38 -0.9 706,569 - ABID97_RS03470 0.38 -1.0 706,736 + ABID97_RS03470 0.44 -1.3 707,000 + ABID97_RS03470 0.54 -0.8 707,000 + ABID97_RS03470 0.54 -1.1 707,000 + ABID97_RS03470 0.54 -1.5 707,000 + ABID97_RS03470 0.54 -2.2 707,000 + ABID97_RS03470 0.54 -0.7 707,000 + ABID97_RS03470 0.54 -1.3 707,001 - ABID97_RS03470 0.54 -0.8 707,001 - ABID97_RS03470 0.54 -1.0 707,001 - ABID97_RS03470 0.54 -2.6 707,001 - ABID97_RS03470 0.54 -1.2 707,115 - ABID97_RS03470 0.58 -1.2 707,115 - ABID97_RS03470 0.58 -1.9 707,132 + ABID97_RS03470 0.59 -1.2 707,132 + ABID97_RS03470 0.59 -1.4 707,132 + ABID97_RS03470 0.59 -1.1 707,132 + ABID97_RS03470 0.59 -0.9 707,132 + ABID97_RS03470 0.59 -0.2 707,132 + ABID97_RS03470 0.59 -0.3 707,132 + ABID97_RS03470 0.59 -0.6 707,133 - ABID97_RS03470 0.59 -1.6 707,133 - ABID97_RS03470 0.59 -1.2 707,133 - ABID97_RS03470 0.59 -0.7 707,133 - ABID97_RS03470 0.59 -0.5 707,198 + ABID97_RS03470 0.61 -1.8 707,199 - ABID97_RS03470 0.61 -1.4 707,199 - ABID97_RS03470 0.61 -1.2 707,321 + ABID97_RS03470 0.66 -1.0 707,322 - ABID97_RS03470 0.66 -2.4 707,322 - ABID97_RS03470 0.66 -0.1 707,393 + ABID97_RS03470 0.69 -1.2 707,393 + ABID97_RS03470 0.69 -0.5 707,393 + ABID97_RS03470 0.69 -0.7 707,393 + ABID97_RS03470 0.69 +1.0 707,393 + ABID97_RS03470 0.69 -0.7 707,393 + ABID97_RS03470 0.69 -1.3 707,394 - ABID97_RS03470 0.69 +0.2 707,394 - ABID97_RS03470 0.69 -1.0 707,394 - ABID97_RS03470 0.69 -1.0 707,492 + ABID97_RS03470 0.72 -1.0 707,493 - ABID97_RS03470 0.72 -0.5 707,493 - ABID97_RS03470 0.72 -0.5 707,493 - ABID97_RS03470 0.72 -1.5 707,607 - ABID97_RS03470 0.76 -1.1 707,607 - ABID97_RS03470 0.76 -1.9 707,607 - ABID97_RS03470 0.76 -1.4 707,607 - ABID97_RS03470 0.76 +0.8 707,645 + ABID97_RS03470 0.78 +2.8 707,750 + ABID97_RS03470 0.82 -1.3 707,750 + ABID97_RS03470 0.82 -1.3 707,750 + ABID97_RS03470 0.82 +0.5 707,750 + ABID97_RS03470 0.82 -1.8 707,751 - ABID97_RS03470 0.82 -0.4 707,751 - ABID97_RS03470 0.82 -1.1 707,751 - ABID97_RS03470 0.82 -1.4 707,751 - ABID97_RS03470 0.82 -0.9 707,751 - ABID97_RS03470 0.82 -1.6 707,751 - ABID97_RS03470 0.82 -0.8 707,804 + ABID97_RS03470 0.84 -1.0 707,804 + ABID97_RS03470 0.84 -0.8 707,804 + ABID97_RS03470 0.84 +0.8 707,805 - ABID97_RS03470 0.84 -1.6 707,805 - ABID97_RS03470 0.84 -1.0 707,805 - ABID97_RS03470 0.84 +0.2 707,805 - ABID97_RS03470 0.84 -0.4 707,805 - ABID97_RS03470 0.84 +0.1 707,805 - ABID97_RS03470 0.84 -0.7 707,828 + ABID97_RS03470 0.85 -1.2 707,828 + ABID97_RS03470 0.85 -1.1 707,828 + ABID97_RS03470 0.85 -1.1 707,921 + ABID97_RS03470 0.88 -1.1 707,921 + ABID97_RS03470 0.88 -0.6 707,921 + ABID97_RS03470 0.88 -2.2 707,922 - ABID97_RS03470 0.88 -1.1 708,088 + -0.9 708,088 + -0.9 708,088 + -0.6 708,088 + -1.0 708,089 - -0.9 708,120 - -1.3 708,143 + -1.4 708,144 - -1.1 708,287 + -0.3 708,287 + +0.0 708,288 - -0.6 708,288 - -0.2 708,702 + ABID97_RS03475 0.22 +0.7 708,702 + ABID97_RS03475 0.22 +1.0 708,702 + ABID97_RS03475 0.22 +3.4 708,702 + ABID97_RS03475 0.22 +0.9 708,702 + ABID97_RS03475 0.22 +0.3 708,703 - ABID97_RS03475 0.22 +0.7 708,715 - ABID97_RS03475 0.23 +0.3 708,784 - ABID97_RS03475 0.27 +1.2 708,789 + ABID97_RS03475 0.27 +0.4 708,789 + ABID97_RS03475 0.27 +0.5 708,789 + ABID97_RS03475 0.27 +1.1 708,789 + ABID97_RS03475 0.27 +0.2 708,790 - ABID97_RS03475 0.27 +0.6 708,790 - ABID97_RS03475 0.27 +1.4 708,790 - ABID97_RS03475 0.27 +0.7 708,790 - ABID97_RS03475 0.27 +0.5 708,790 - ABID97_RS03475 0.27 +0.7 708,790 - ABID97_RS03475 0.27 +0.6 708,801 + ABID97_RS03475 0.28 +1.3 708,802 - ABID97_RS03475 0.28 -0.1 708,802 - ABID97_RS03475 0.28 +0.4 708,960 + ABID97_RS03475 0.37 +1.4 708,976 + ABID97_RS03475 0.38 +1.2 708,976 + ABID97_RS03475 0.38 +1.0 708,976 + ABID97_RS03475 0.38 +1.2 708,976 + ABID97_RS03475 0.38 +1.0 708,977 - ABID97_RS03475 0.38 +0.9 709,222 - ABID97_RS03475 0.51 +0.6 709,228 - ABID97_RS03475 0.52 +0.9 709,228 - ABID97_RS03475 0.52 +0.6
Or see this region's nucleotide sequence