Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_24700 and IAI46_24705 are separated by 28 nucleotides IAI46_24705 and IAI46_24710 are separated by 298 nucleotides IAI46_24710 and IAI46_24715 are separated by 9 nucleotides
IAI46_24700: IAI46_24700 - glutaredoxin 3, at 5,272,307 to 5,272,555
_24700
IAI46_24705: IAI46_24705 - rhodanese-like domain-containing protein, at 5,272,584 to 5,273,018
_24705
IAI46_24710: IAI46_24710 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, at 5,273,317 to 5,274,861
_24710
IAI46_24715: IAI46_24715 - murein hydrolase activator EnvC, at 5,274,871 to 5,276,205
_24715
Position (kb) 5273
5274
5275 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5272.348 kb on - strand, within IAI46_24700 at 5272.349 kb on + strand, within IAI46_24700 at 5272.369 kb on + strand, within IAI46_24700 at 5272.536 kb on + strand at 5272.536 kb on + strand at 5272.536 kb on + strand at 5272.536 kb on + strand at 5272.537 kb on - strand at 5272.537 kb on - strand at 5272.537 kb on - strand at 5272.537 kb on - strand at 5272.537 kb on - strand at 5272.537 kb on - strand at 5272.540 kb on + strand at 5272.540 kb on + strand at 5272.540 kb on + strand at 5272.549 kb on + strand at 5272.549 kb on + strand at 5272.560 kb on + strand at 5272.561 kb on - strand at 5272.561 kb on - strand at 5272.561 kb on - strand at 5272.572 kb on + strand at 5272.572 kb on + strand at 5272.573 kb on - strand at 5272.578 kb on - strand at 5272.585 kb on + strand at 5272.585 kb on + strand at 5272.585 kb on + strand at 5272.586 kb on - strand at 5272.586 kb on - strand at 5272.646 kb on + strand, within IAI46_24705 at 5272.646 kb on + strand, within IAI46_24705 at 5272.646 kb on + strand, within IAI46_24705 at 5272.646 kb on + strand, within IAI46_24705 at 5272.869 kb on - strand, within IAI46_24705 at 5272.977 kb on + strand at 5272.978 kb on - strand at 5272.978 kb on - strand at 5272.992 kb on - strand at 5273.025 kb on + strand at 5273.025 kb on + strand at 5273.025 kb on + strand at 5273.025 kb on + strand at 5273.026 kb on - strand at 5273.026 kb on - strand at 5273.072 kb on + strand at 5273.073 kb on - strand at 5273.073 kb on - strand at 5273.073 kb on - strand at 5273.074 kb on + strand at 5273.074 kb on + strand at 5273.075 kb on - strand at 5273.075 kb on - strand at 5273.075 kb on - strand at 5273.075 kb on - strand at 5273.094 kb on + strand at 5273.095 kb on - strand at 5273.095 kb on - strand at 5273.103 kb on + strand at 5273.103 kb on + strand at 5273.104 kb on - strand at 5273.114 kb on + strand at 5273.115 kb on - strand at 5273.134 kb on - strand at 5273.162 kb on + strand at 5273.163 kb on - strand at 5273.251 kb on + strand at 5273.281 kb on + strand at 5273.282 kb on - strand at 5273.293 kb on - strand at 5273.310 kb on + strand at 5273.311 kb on - strand at 5273.343 kb on - strand at 5273.343 kb on - strand at 5273.448 kb on + strand at 5273.448 kb on + strand at 5273.449 kb on - strand at 5273.454 kb on + strand at 5273.658 kb on + strand, within IAI46_24710 at 5273.658 kb on + strand, within IAI46_24710 at 5273.658 kb on + strand, within IAI46_24710 at 5273.659 kb on - strand, within IAI46_24710 at 5273.659 kb on - strand, within IAI46_24710 at 5273.659 kb on - strand, within IAI46_24710 at 5273.659 kb on - strand, within IAI46_24710 at 5273.659 kb on - strand, within IAI46_24710 at 5273.659 kb on - strand, within IAI46_24710 at 5273.659 kb on - strand, within IAI46_24710 at 5273.659 kb on - strand, within IAI46_24710 at 5273.706 kb on + strand, within IAI46_24710 at 5273.706 kb on + strand, within IAI46_24710 at 5273.756 kb on - strand, within IAI46_24710 at 5273.824 kb on - strand, within IAI46_24710 at 5273.878 kb on + strand, within IAI46_24710 at 5273.878 kb on + strand, within IAI46_24710 at 5273.881 kb on + strand, within IAI46_24710 at 5273.881 kb on + strand, within IAI46_24710 at 5273.881 kb on + strand, within IAI46_24710 at 5273.881 kb on + strand, within IAI46_24710 at 5273.882 kb on - strand, within IAI46_24710 at 5273.882 kb on - strand, within IAI46_24710 at 5273.882 kb on - strand, within IAI46_24710 at 5273.887 kb on - strand, within IAI46_24710 at 5273.927 kb on - strand, within IAI46_24710 at 5273.933 kb on + strand, within IAI46_24710 at 5273.933 kb on + strand, within IAI46_24710 at 5274.141 kb on - strand, within IAI46_24710 at 5274.211 kb on + strand, within IAI46_24710 at 5274.349 kb on + strand, within IAI46_24710 at 5274.349 kb on + strand, within IAI46_24710 at 5274.349 kb on + strand, within IAI46_24710 at 5274.349 kb on + strand, within IAI46_24710 at 5274.350 kb on - strand, within IAI46_24710 at 5274.350 kb on - strand, within IAI46_24710 at 5274.350 kb on - strand, within IAI46_24710 at 5274.350 kb on - strand, within IAI46_24710 at 5274.421 kb on + strand, within IAI46_24710 at 5274.480 kb on + strand, within IAI46_24710 at 5274.493 kb on + strand, within IAI46_24710 at 5274.494 kb on - strand, within IAI46_24710 at 5274.515 kb on - strand, within IAI46_24710 at 5274.528 kb on + strand, within IAI46_24710 at 5274.529 kb on - strand, within IAI46_24710 at 5274.733 kb on + strand at 5274.734 kb on - strand at 5274.837 kb on + strand at 5274.837 kb on + strand at 5274.870 kb on + strand at 5274.871 kb on - strand at 5274.897 kb on - strand at 5274.897 kb on - strand at 5274.965 kb on + strand at 5274.966 kb on - strand at 5274.987 kb on - strand at 5275.042 kb on - strand, within IAI46_24715 at 5275.042 kb on - strand, within IAI46_24715 at 5275.138 kb on - strand, within IAI46_24715 at 5275.218 kb on + strand, within IAI46_24715 at 5275.218 kb on + strand, within IAI46_24715 at 5275.219 kb on + strand, within IAI46_24715 at 5275.219 kb on - strand, within IAI46_24715 at 5275.219 kb on - strand, within IAI46_24715 at 5275.366 kb on - strand, within IAI46_24715 at 5275.374 kb on + strand, within IAI46_24715 at 5275.375 kb on - strand, within IAI46_24715 at 5275.384 kb on + strand, within IAI46_24715 at 5275.506 kb on - strand, within IAI46_24715 at 5275.506 kb on - strand, within IAI46_24715 at 5275.557 kb on + strand, within IAI46_24715 at 5275.764 kb on + strand, within IAI46_24715 at 5275.765 kb on - strand, within IAI46_24715 at 5275.768 kb on + strand, within IAI46_24715 at 5275.768 kb on + strand, within IAI46_24715 at 5275.768 kb on + strand, within IAI46_24715 at 5275.768 kb on + strand, within IAI46_24715 at 5275.768 kb on + strand, within IAI46_24715 at 5275.769 kb on - strand, within IAI46_24715 at 5275.769 kb on - strand, within IAI46_24715 at 5275.769 kb on - strand, within IAI46_24715 at 5275.769 kb on - strand, within IAI46_24715 at 5275.771 kb on - strand, within IAI46_24715 at 5275.771 kb on - strand, within IAI46_24715 at 5275.841 kb on + strand, within IAI46_24715 at 5275.841 kb on + strand, within IAI46_24715
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 5,272,348 - IAI46_24700 0.16 -0.1 5,272,349 + IAI46_24700 0.17 +1.4 5,272,369 + IAI46_24700 0.25 -0.6 5,272,536 + +2.1 5,272,536 + -1.1 5,272,536 + -0.6 5,272,536 + +0.2 5,272,537 - +0.3 5,272,537 - -0.1 5,272,537 - +0.4 5,272,537 - +0.7 5,272,537 - +0.1 5,272,537 - -0.2 5,272,540 + -2.0 5,272,540 + +0.6 5,272,540 + +1.4 5,272,549 + -0.3 5,272,549 + -0.6 5,272,560 + -2.1 5,272,561 - +0.5 5,272,561 - -0.5 5,272,561 - +0.8 5,272,572 + +1.6 5,272,572 + -1.6 5,272,573 - +0.7 5,272,578 - +0.7 5,272,585 + -0.9 5,272,585 + -1.2 5,272,585 + +0.8 5,272,586 - -0.0 5,272,586 - -0.2 5,272,646 + IAI46_24705 0.14 -0.7 5,272,646 + IAI46_24705 0.14 +0.0 5,272,646 + IAI46_24705 0.14 +0.9 5,272,646 + IAI46_24705 0.14 -0.9 5,272,869 - IAI46_24705 0.66 +0.2 5,272,977 + +0.1 5,272,978 - -0.2 5,272,978 - -0.1 5,272,992 - +0.5 5,273,025 + -0.6 5,273,025 + -0.7 5,273,025 + -1.2 5,273,025 + +0.4 5,273,026 - +0.3 5,273,026 - -0.4 5,273,072 + -2.0 5,273,073 - +0.7 5,273,073 - +1.3 5,273,073 - +0.1 5,273,074 + -0.4 5,273,074 + +1.6 5,273,075 - -0.5 5,273,075 - +0.5 5,273,075 - +0.2 5,273,075 - -0.2 5,273,094 + +0.1 5,273,095 - +0.3 5,273,095 - +1.6 5,273,103 + -2.0 5,273,103 + +0.7 5,273,104 - +0.3 5,273,114 + -0.7 5,273,115 - +0.9 5,273,134 - -0.1 5,273,162 + +0.1 5,273,163 - -1.9 5,273,251 + +0.4 5,273,281 + -0.0 5,273,282 - +0.1 5,273,293 - -0.1 5,273,310 + +0.8 5,273,311 - +0.5 5,273,343 - +0.7 5,273,343 - -0.1 5,273,448 + -0.0 5,273,448 + -0.6 5,273,449 - +0.4 5,273,454 + +0.5 5,273,658 + IAI46_24710 0.22 +0.4 5,273,658 + IAI46_24710 0.22 -0.3 5,273,658 + IAI46_24710 0.22 -0.5 5,273,659 - IAI46_24710 0.22 +0.1 5,273,659 - IAI46_24710 0.22 +0.7 5,273,659 - IAI46_24710 0.22 +0.7 5,273,659 - IAI46_24710 0.22 +1.1 5,273,659 - IAI46_24710 0.22 +0.7 5,273,659 - IAI46_24710 0.22 -0.5 5,273,659 - IAI46_24710 0.22 -0.6 5,273,659 - IAI46_24710 0.22 -0.1 5,273,706 + IAI46_24710 0.25 +0.8 5,273,706 + IAI46_24710 0.25 -0.2 5,273,756 - IAI46_24710 0.28 -0.5 5,273,824 - IAI46_24710 0.33 -0.5 5,273,878 + IAI46_24710 0.36 -0.0 5,273,878 + IAI46_24710 0.36 -0.8 5,273,881 + IAI46_24710 0.37 -0.1 5,273,881 + IAI46_24710 0.37 +1.3 5,273,881 + IAI46_24710 0.37 +0.0 5,273,881 + IAI46_24710 0.37 -0.4 5,273,882 - IAI46_24710 0.37 -1.2 5,273,882 - IAI46_24710 0.37 +0.0 5,273,882 - IAI46_24710 0.37 +0.5 5,273,887 - IAI46_24710 0.37 -0.1 5,273,927 - IAI46_24710 0.39 -0.3 5,273,933 + IAI46_24710 0.40 +0.1 5,273,933 + IAI46_24710 0.40 +0.6 5,274,141 - IAI46_24710 0.53 -0.2 5,274,211 + IAI46_24710 0.58 -1.4 5,274,349 + IAI46_24710 0.67 +0.4 5,274,349 + IAI46_24710 0.67 -1.4 5,274,349 + IAI46_24710 0.67 +0.3 5,274,349 + IAI46_24710 0.67 -0.7 5,274,350 - IAI46_24710 0.67 +0.4 5,274,350 - IAI46_24710 0.67 +0.2 5,274,350 - IAI46_24710 0.67 +0.5 5,274,350 - IAI46_24710 0.67 +0.1 5,274,421 + IAI46_24710 0.71 -0.2 5,274,480 + IAI46_24710 0.75 -1.5 5,274,493 + IAI46_24710 0.76 +0.2 5,274,494 - IAI46_24710 0.76 +0.3 5,274,515 - IAI46_24710 0.78 -1.2 5,274,528 + IAI46_24710 0.78 -0.1 5,274,529 - IAI46_24710 0.78 +0.1 5,274,733 + +0.8 5,274,734 - +0.8 5,274,837 + +1.0 5,274,837 + +0.0 5,274,870 + +0.2 5,274,871 - -0.4 5,274,897 - +0.5 5,274,897 - +0.5 5,274,965 + -0.1 5,274,966 - -0.1 5,274,987 - +0.3 5,275,042 - IAI46_24715 0.13 -0.0 5,275,042 - IAI46_24715 0.13 +0.0 5,275,138 - IAI46_24715 0.20 -0.7 5,275,218 + IAI46_24715 0.26 +0.0 5,275,218 + IAI46_24715 0.26 -0.3 5,275,219 + IAI46_24715 0.26 +0.2 5,275,219 - IAI46_24715 0.26 -0.2 5,275,219 - IAI46_24715 0.26 +0.3 5,275,366 - IAI46_24715 0.37 -0.1 5,275,374 + IAI46_24715 0.38 +1.1 5,275,375 - IAI46_24715 0.38 +1.0 5,275,384 + IAI46_24715 0.38 -0.6 5,275,506 - IAI46_24715 0.48 +0.3 5,275,506 - IAI46_24715 0.48 +0.2 5,275,557 + IAI46_24715 0.51 -0.1 5,275,764 + IAI46_24715 0.67 -0.3 5,275,765 - IAI46_24715 0.67 -0.3 5,275,768 + IAI46_24715 0.67 -0.1 5,275,768 + IAI46_24715 0.67 -0.3 5,275,768 + IAI46_24715 0.67 +0.1 5,275,768 + IAI46_24715 0.67 +0.4 5,275,768 + IAI46_24715 0.67 +0.8 5,275,769 - IAI46_24715 0.67 +1.4 5,275,769 - IAI46_24715 0.67 +0.9 5,275,769 - IAI46_24715 0.67 -0.7 5,275,769 - IAI46_24715 0.67 +0.6 5,275,771 - IAI46_24715 0.67 +0.9 5,275,771 - IAI46_24715 0.67 -0.9 5,275,841 + IAI46_24715 0.73 -0.4 5,275,841 + IAI46_24715 0.73 +0.1
Or see this region's nucleotide sequence