Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_24575 and IAI46_24580 are separated by 91 nucleotides IAI46_24580 and IAI46_24585 are separated by 80 nucleotides IAI46_24585 and IAI46_24590 are separated by 56 nucleotides
IAI46_24575: IAI46_24575 - HslU--HslV peptidase ATPase subunit, at 5,248,761 to 5,250,095
_24575
IAI46_24580: IAI46_24580 - 1,4-dihydroxy-2-naphthoate polyprenyltransferase, at 5,250,187 to 5,251,104
_24580
IAI46_24585: IAI46_24585 - ribonuclease E activity regulator RraA, at 5,251,185 to 5,251,670
_24585
IAI46_24590: IAI46_24590 - septal ring assembly protein ZapB, at 5,251,727 to 5,251,966
_24590
Position (kb) 5250
5251
5252 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5249.270 kb on + strand, within IAI46_24575 at 5249.523 kb on - strand, within IAI46_24575 at 5249.826 kb on + strand, within IAI46_24575 at 5249.827 kb on - strand, within IAI46_24575 at 5249.978 kb on + strand at 5249.979 kb on - strand at 5249.986 kb on - strand at 5250.003 kb on - strand at 5250.003 kb on - strand at 5250.034 kb on - strand at 5250.034 kb on - strand at 5250.034 kb on - strand at 5250.041 kb on + strand at 5250.041 kb on + strand at 5250.041 kb on + strand at 5250.042 kb on - strand at 5250.042 kb on - strand at 5250.042 kb on - strand at 5250.087 kb on - strand at 5250.091 kb on + strand at 5250.091 kb on + strand at 5250.093 kb on + strand at 5250.148 kb on + strand at 5250.148 kb on + strand at 5250.154 kb on + strand at 5250.170 kb on + strand at 5250.201 kb on + strand at 5250.201 kb on + strand at 5250.201 kb on + strand at 5250.202 kb on - strand at 5250.202 kb on - strand at 5250.398 kb on + strand, within IAI46_24580 at 5250.399 kb on - strand, within IAI46_24580 at 5250.497 kb on + strand, within IAI46_24580 at 5250.497 kb on + strand, within IAI46_24580 at 5250.498 kb on - strand, within IAI46_24580 at 5250.591 kb on + strand, within IAI46_24580 at 5250.592 kb on - strand, within IAI46_24580 at 5250.592 kb on - strand, within IAI46_24580 at 5250.606 kb on + strand, within IAI46_24580 at 5250.606 kb on + strand, within IAI46_24580 at 5250.606 kb on + strand, within IAI46_24580 at 5250.607 kb on - strand, within IAI46_24580 at 5250.610 kb on + strand, within IAI46_24580 at 5250.610 kb on + strand, within IAI46_24580 at 5250.611 kb on - strand, within IAI46_24580 at 5250.611 kb on - strand, within IAI46_24580 at 5250.612 kb on + strand, within IAI46_24580 at 5250.612 kb on + strand, within IAI46_24580 at 5250.637 kb on + strand, within IAI46_24580 at 5250.638 kb on - strand, within IAI46_24580 at 5250.638 kb on - strand, within IAI46_24580 at 5250.648 kb on - strand, within IAI46_24580 at 5250.700 kb on + strand, within IAI46_24580 at 5250.700 kb on + strand, within IAI46_24580 at 5250.700 kb on + strand, within IAI46_24580 at 5250.701 kb on - strand, within IAI46_24580 at 5250.701 kb on - strand, within IAI46_24580 at 5250.701 kb on - strand, within IAI46_24580 at 5250.703 kb on + strand, within IAI46_24580 at 5250.704 kb on - strand, within IAI46_24580 at 5250.729 kb on + strand, within IAI46_24580 at 5250.789 kb on + strand, within IAI46_24580 at 5250.790 kb on - strand, within IAI46_24580 at 5250.832 kb on - strand, within IAI46_24580 at 5250.868 kb on + strand, within IAI46_24580 at 5250.869 kb on - strand, within IAI46_24580 at 5250.869 kb on - strand, within IAI46_24580 at 5250.869 kb on - strand, within IAI46_24580 at 5250.871 kb on + strand, within IAI46_24580 at 5250.871 kb on + strand, within IAI46_24580 at 5250.872 kb on - strand, within IAI46_24580 at 5250.872 kb on - strand, within IAI46_24580 at 5250.872 kb on - strand, within IAI46_24580 at 5250.936 kb on + strand, within IAI46_24580 at 5250.937 kb on - strand, within IAI46_24580 at 5251.044 kb on + strand at 5251.044 kb on + strand at 5251.044 kb on + strand at 5251.044 kb on + strand at 5251.044 kb on + strand at 5251.044 kb on + strand at 5251.045 kb on - strand at 5251.045 kb on - strand at 5251.045 kb on - strand at 5251.071 kb on + strand at 5251.071 kb on + strand at 5251.071 kb on + strand at 5251.072 kb on - strand at 5251.149 kb on - strand at 5251.177 kb on - strand at 5251.191 kb on + strand at 5251.191 kb on + strand at 5251.192 kb on - strand at 5251.196 kb on + strand at 5251.197 kb on - strand at 5251.218 kb on + strand at 5251.218 kb on + strand at 5251.218 kb on + strand at 5251.218 kb on + strand at 5251.218 kb on + strand at 5251.218 kb on + strand at 5251.218 kb on + strand at 5251.219 kb on - strand at 5251.219 kb on - strand at 5251.219 kb on - strand at 5251.219 kb on - strand at 5251.219 kb on - strand at 5251.219 kb on - strand at 5251.219 kb on - strand at 5251.219 kb on - strand at 5251.232 kb on - strand at 5251.249 kb on + strand, within IAI46_24585 at 5251.249 kb on + strand, within IAI46_24585 at 5251.250 kb on - strand, within IAI46_24585 at 5251.271 kb on + strand, within IAI46_24585 at 5251.271 kb on + strand, within IAI46_24585 at 5251.462 kb on - strand, within IAI46_24585 at 5251.617 kb on + strand, within IAI46_24585 at 5251.617 kb on + strand, within IAI46_24585 at 5251.618 kb on - strand, within IAI46_24585 at 5251.618 kb on - strand, within IAI46_24585 at 5251.637 kb on + strand at 5251.637 kb on + strand at 5251.637 kb on + strand at 5251.638 kb on - strand at 5251.669 kb on - strand at 5251.720 kb on + strand at 5251.775 kb on + strand, within IAI46_24590 at 5251.861 kb on + strand, within IAI46_24590 at 5251.912 kb on + strand, within IAI46_24590 at 5251.952 kb on + strand at 5251.952 kb on + strand at 5251.985 kb on + strand at 5251.985 kb on + strand at 5251.985 kb on + strand at 5251.986 kb on - strand at 5251.986 kb on - strand at 5251.995 kb on + strand at 5251.995 kb on + strand at 5251.995 kb on + strand at 5251.995 kb on + strand at 5251.995 kb on + strand at 5251.995 kb on + strand at 5251.996 kb on - strand at 5251.996 kb on - strand at 5251.996 kb on - strand at 5251.996 kb on - strand at 5251.996 kb on - strand at 5251.996 kb on - strand at 5252.001 kb on + strand at 5252.001 kb on + strand at 5252.001 kb on + strand at 5252.001 kb on + strand at 5252.001 kb on + strand at 5252.001 kb on + strand at 5252.002 kb on - strand at 5252.002 kb on - strand at 5252.002 kb on - strand at 5252.002 kb on - strand at 5252.002 kb on - strand at 5252.002 kb on - strand at 5252.002 kb on - strand at 5252.002 kb on - strand at 5252.003 kb on + strand at 5252.003 kb on + strand at 5252.003 kb on + strand at 5252.003 kb on + strand at 5252.004 kb on - strand at 5252.004 kb on - strand at 5252.004 kb on - strand at 5252.004 kb on - strand at 5252.008 kb on - strand at 5252.042 kb on - strand at 5252.042 kb on - strand at 5252.096 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 5,249,270 + IAI46_24575 0.38 +0.3 5,249,523 - IAI46_24575 0.57 -0.7 5,249,826 + IAI46_24575 0.80 -1.3 5,249,827 - IAI46_24575 0.80 +0.9 5,249,978 + -0.6 5,249,979 - -1.1 5,249,986 - -0.2 5,250,003 - +0.8 5,250,003 - +0.4 5,250,034 - -0.9 5,250,034 - +0.1 5,250,034 - +0.5 5,250,041 + -0.0 5,250,041 + +0.5 5,250,041 + +0.8 5,250,042 - +1.0 5,250,042 - -0.0 5,250,042 - -1.0 5,250,087 - -1.7 5,250,091 + -1.3 5,250,091 + -1.3 5,250,093 + -0.1 5,250,148 + +0.1 5,250,148 + -1.2 5,250,154 + -0.4 5,250,170 + -0.0 5,250,201 + -0.5 5,250,201 + -0.3 5,250,201 + +0.1 5,250,202 - -0.3 5,250,202 - -2.0 5,250,398 + IAI46_24580 0.23 -0.7 5,250,399 - IAI46_24580 0.23 +0.7 5,250,497 + IAI46_24580 0.34 +1.2 5,250,497 + IAI46_24580 0.34 -1.2 5,250,498 - IAI46_24580 0.34 -0.4 5,250,591 + IAI46_24580 0.44 +0.2 5,250,592 - IAI46_24580 0.44 +0.1 5,250,592 - IAI46_24580 0.44 -0.1 5,250,606 + IAI46_24580 0.46 -0.7 5,250,606 + IAI46_24580 0.46 -1.5 5,250,606 + IAI46_24580 0.46 -0.3 5,250,607 - IAI46_24580 0.46 +0.3 5,250,610 + IAI46_24580 0.46 -0.2 5,250,610 + IAI46_24580 0.46 -1.0 5,250,611 - IAI46_24580 0.46 -0.9 5,250,611 - IAI46_24580 0.46 -1.0 5,250,612 + IAI46_24580 0.46 +0.4 5,250,612 + IAI46_24580 0.46 -0.3 5,250,637 + IAI46_24580 0.49 -0.9 5,250,638 - IAI46_24580 0.49 -2.5 5,250,638 - IAI46_24580 0.49 -0.7 5,250,648 - IAI46_24580 0.50 -1.5 5,250,700 + IAI46_24580 0.56 -0.5 5,250,700 + IAI46_24580 0.56 -0.1 5,250,700 + IAI46_24580 0.56 -0.6 5,250,701 - IAI46_24580 0.56 +0.0 5,250,701 - IAI46_24580 0.56 -0.0 5,250,701 - IAI46_24580 0.56 -0.0 5,250,703 + IAI46_24580 0.56 +0.2 5,250,704 - IAI46_24580 0.56 -0.4 5,250,729 + IAI46_24580 0.59 +0.1 5,250,789 + IAI46_24580 0.66 +3.0 5,250,790 - IAI46_24580 0.66 +0.3 5,250,832 - IAI46_24580 0.70 +0.2 5,250,868 + IAI46_24580 0.74 -1.3 5,250,869 - IAI46_24580 0.74 -0.2 5,250,869 - IAI46_24580 0.74 -1.6 5,250,869 - IAI46_24580 0.74 +0.7 5,250,871 + IAI46_24580 0.75 -0.9 5,250,871 + IAI46_24580 0.75 -0.2 5,250,872 - IAI46_24580 0.75 -2.1 5,250,872 - IAI46_24580 0.75 -1.0 5,250,872 - IAI46_24580 0.75 +0.8 5,250,936 + IAI46_24580 0.82 -1.0 5,250,937 - IAI46_24580 0.82 -0.7 5,251,044 + +0.3 5,251,044 + -1.7 5,251,044 + -1.5 5,251,044 + -1.3 5,251,044 + -0.3 5,251,044 + -0.1 5,251,045 - -0.1 5,251,045 - -0.4 5,251,045 - -1.3 5,251,071 + -1.2 5,251,071 + -0.1 5,251,071 + -0.5 5,251,072 - -0.4 5,251,149 - -0.6 5,251,177 - +0.0 5,251,191 + +0.2 5,251,191 + -0.7 5,251,192 - -0.2 5,251,196 + -0.4 5,251,197 - +0.1 5,251,218 + +1.1 5,251,218 + -0.2 5,251,218 + +0.3 5,251,218 + -0.3 5,251,218 + +1.5 5,251,218 + -0.2 5,251,218 + +0.6 5,251,219 - -0.2 5,251,219 - -1.2 5,251,219 - +0.2 5,251,219 - +0.3 5,251,219 - +0.2 5,251,219 - -0.1 5,251,219 - -0.3 5,251,219 - -0.6 5,251,232 - +0.2 5,251,249 + IAI46_24585 0.13 +0.3 5,251,249 + IAI46_24585 0.13 +0.2 5,251,250 - IAI46_24585 0.13 +1.2 5,251,271 + IAI46_24585 0.18 -0.4 5,251,271 + IAI46_24585 0.18 +0.4 5,251,462 - IAI46_24585 0.57 +0.4 5,251,617 + IAI46_24585 0.89 +0.6 5,251,617 + IAI46_24585 0.89 -0.4 5,251,618 - IAI46_24585 0.89 -0.6 5,251,618 - IAI46_24585 0.89 +0.2 5,251,637 + +0.2 5,251,637 + +0.3 5,251,637 + -0.3 5,251,638 - -0.1 5,251,669 - +0.5 5,251,720 + +0.2 5,251,775 + IAI46_24590 0.20 +0.5 5,251,861 + IAI46_24590 0.56 -0.3 5,251,912 + IAI46_24590 0.77 -0.4 5,251,952 + -2.4 5,251,952 + -0.1 5,251,985 + -0.0 5,251,985 + +0.5 5,251,985 + +1.2 5,251,986 - +0.1 5,251,986 - +0.1 5,251,995 + -0.1 5,251,995 + +0.6 5,251,995 + -0.4 5,251,995 + +1.1 5,251,995 + -0.0 5,251,995 + -0.4 5,251,996 - -0.3 5,251,996 - -0.7 5,251,996 - +0.2 5,251,996 - -0.2 5,251,996 - +0.3 5,251,996 - +0.5 5,252,001 + +1.8 5,252,001 + +0.6 5,252,001 + -0.5 5,252,001 + +0.9 5,252,001 + -0.0 5,252,001 + +0.2 5,252,002 - -0.5 5,252,002 - -0.5 5,252,002 - +0.2 5,252,002 - -0.4 5,252,002 - -0.5 5,252,002 - -0.0 5,252,002 - -0.1 5,252,002 - -0.5 5,252,003 + +0.2 5,252,003 + +0.6 5,252,003 + +0.8 5,252,003 + -0.3 5,252,004 - -0.1 5,252,004 - -0.1 5,252,004 - +0.2 5,252,004 - +0.5 5,252,008 - +0.5 5,252,042 - +0.3 5,252,042 - -0.6 5,252,096 + -0.1
Or see this region's nucleotide sequence