Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_23670 and IAI46_23675 are separated by 50 nucleotides IAI46_23675 and IAI46_23680 are separated by 2 nucleotides IAI46_23680 and IAI46_23685 overlap by 8 nucleotides
IAI46_23670: IAI46_23670 - uroporphyrinogen-III C-methyltransferase, at 5,034,753 to 5,036,156
_23670
IAI46_23675: IAI46_23675 - tryptophan--tRNA ligase, at 5,036,207 to 5,037,211
_23675
IAI46_23680: IAI46_23680 - phosphoglycolate phosphatase, at 5,037,214 to 5,037,912
_23680
IAI46_23685: IAI46_23685 - ribulose-phosphate 3-epimerase, at 5,037,905 to 5,038,582
_23685
Position (kb)
5036
5037
5038 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5035.631 kb on + strand, within IAI46_23670 at 5035.632 kb on - strand, within IAI46_23670 at 5035.643 kb on - strand, within IAI46_23670 at 5035.716 kb on - strand, within IAI46_23670 at 5035.767 kb on + strand, within IAI46_23670 at 5035.893 kb on + strand, within IAI46_23670 at 5035.893 kb on + strand, within IAI46_23670 at 5035.894 kb on - strand, within IAI46_23670 at 5035.894 kb on - strand, within IAI46_23670 at 5036.065 kb on + strand at 5036.066 kb on - strand at 5036.239 kb on - strand at 5036.403 kb on + strand, within IAI46_23675 at 5036.403 kb on + strand, within IAI46_23675 at 5036.403 kb on + strand, within IAI46_23675 at 5036.403 kb on + strand, within IAI46_23675 at 5036.709 kb on + strand, within IAI46_23675 at 5036.709 kb on + strand, within IAI46_23675 at 5036.710 kb on - strand, within IAI46_23675 at 5036.796 kb on + strand, within IAI46_23675 at 5036.797 kb on - strand, within IAI46_23675 at 5036.797 kb on - strand, within IAI46_23675 at 5036.913 kb on + strand, within IAI46_23675 at 5036.913 kb on + strand, within IAI46_23675 at 5036.914 kb on - strand, within IAI46_23675 at 5036.917 kb on + strand, within IAI46_23675 at 5036.917 kb on + strand, within IAI46_23675 at 5036.917 kb on + strand, within IAI46_23675 at 5036.918 kb on - strand, within IAI46_23675 at 5036.918 kb on - strand, within IAI46_23675 at 5036.918 kb on - strand, within IAI46_23675 at 5036.919 kb on + strand, within IAI46_23675 at 5036.919 kb on + strand, within IAI46_23675 at 5036.919 kb on + strand, within IAI46_23675 at 5036.919 kb on + strand, within IAI46_23675 at 5036.919 kb on + strand, within IAI46_23675 at 5036.920 kb on - strand, within IAI46_23675 at 5036.920 kb on - strand, within IAI46_23675 at 5036.920 kb on - strand, within IAI46_23675 at 5036.920 kb on - strand, within IAI46_23675 at 5036.947 kb on + strand, within IAI46_23675 at 5036.948 kb on - strand, within IAI46_23675 at 5036.948 kb on - strand, within IAI46_23675 at 5036.970 kb on - strand, within IAI46_23675 at 5036.970 kb on - strand, within IAI46_23675 at 5036.970 kb on - strand, within IAI46_23675 at 5037.035 kb on - strand, within IAI46_23675 at 5037.035 kb on - strand, within IAI46_23675 at 5037.096 kb on + strand, within IAI46_23675 at 5037.096 kb on + strand, within IAI46_23675 at 5037.150 kb on + strand at 5037.150 kb on + strand at 5037.150 kb on + strand at 5037.150 kb on + strand at 5037.150 kb on + strand at 5037.150 kb on + strand at 5037.151 kb on - strand at 5037.151 kb on - strand at 5037.151 kb on - strand at 5037.151 kb on - strand at 5037.151 kb on - strand at 5037.190 kb on + strand at 5037.191 kb on - strand at 5037.194 kb on + strand at 5037.195 kb on - strand at 5037.195 kb on - strand at 5037.195 kb on - strand at 5037.205 kb on + strand at 5037.205 kb on + strand at 5037.205 kb on + strand at 5037.205 kb on + strand at 5037.206 kb on - strand at 5037.216 kb on - strand at 5037.232 kb on + strand at 5037.232 kb on + strand at 5037.318 kb on - strand, within IAI46_23680 at 5037.321 kb on + strand, within IAI46_23680 at 5037.321 kb on + strand, within IAI46_23680 at 5037.324 kb on - strand, within IAI46_23680 at 5037.324 kb on - strand, within IAI46_23680 at 5037.329 kb on + strand, within IAI46_23680 at 5037.330 kb on - strand, within IAI46_23680 at 5037.330 kb on - strand, within IAI46_23680 at 5037.375 kb on + strand, within IAI46_23680 at 5037.375 kb on + strand, within IAI46_23680 at 5037.376 kb on - strand, within IAI46_23680 at 5037.492 kb on + strand, within IAI46_23680 at 5037.596 kb on - strand, within IAI46_23680 at 5037.659 kb on + strand, within IAI46_23680 at 5037.660 kb on - strand, within IAI46_23680 at 5037.660 kb on - strand, within IAI46_23680 at 5037.739 kb on + strand, within IAI46_23680 at 5037.739 kb on + strand, within IAI46_23680 at 5037.740 kb on - strand, within IAI46_23680 at 5037.823 kb on - strand, within IAI46_23680 at 5037.829 kb on - strand, within IAI46_23680 at 5038.209 kb on + strand, within IAI46_23685 at 5038.210 kb on - strand, within IAI46_23685
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 5,035,631 + IAI46_23670 0.63 +1.3 5,035,632 - IAI46_23670 0.63 -0.7 5,035,643 - IAI46_23670 0.63 -0.3 5,035,716 - IAI46_23670 0.69 -1.9 5,035,767 + IAI46_23670 0.72 +0.9 5,035,893 + IAI46_23670 0.81 +0.8 5,035,893 + IAI46_23670 0.81 +0.7 5,035,894 - IAI46_23670 0.81 -0.9 5,035,894 - IAI46_23670 0.81 -0.2 5,036,065 + -0.1 5,036,066 - +0.3 5,036,239 - +0.2 5,036,403 + IAI46_23675 0.20 +0.2 5,036,403 + IAI46_23675 0.20 -0.1 5,036,403 + IAI46_23675 0.20 -0.3 5,036,403 + IAI46_23675 0.20 +0.5 5,036,709 + IAI46_23675 0.50 +2.2 5,036,709 + IAI46_23675 0.50 +1.6 5,036,710 - IAI46_23675 0.50 +0.7 5,036,796 + IAI46_23675 0.59 +0.1 5,036,797 - IAI46_23675 0.59 -0.7 5,036,797 - IAI46_23675 0.59 -0.2 5,036,913 + IAI46_23675 0.70 +0.9 5,036,913 + IAI46_23675 0.70 -0.6 5,036,914 - IAI46_23675 0.70 +1.1 5,036,917 + IAI46_23675 0.71 +1.2 5,036,917 + IAI46_23675 0.71 -0.1 5,036,917 + IAI46_23675 0.71 +1.2 5,036,918 - IAI46_23675 0.71 -0.0 5,036,918 - IAI46_23675 0.71 +0.7 5,036,918 - IAI46_23675 0.71 +0.0 5,036,919 + IAI46_23675 0.71 -0.0 5,036,919 + IAI46_23675 0.71 -1.4 5,036,919 + IAI46_23675 0.71 -0.5 5,036,919 + IAI46_23675 0.71 -1.0 5,036,919 + IAI46_23675 0.71 +0.2 5,036,920 - IAI46_23675 0.71 -1.2 5,036,920 - IAI46_23675 0.71 +0.3 5,036,920 - IAI46_23675 0.71 +1.0 5,036,920 - IAI46_23675 0.71 -0.1 5,036,947 + IAI46_23675 0.74 +0.7 5,036,948 - IAI46_23675 0.74 -0.2 5,036,948 - IAI46_23675 0.74 +0.3 5,036,970 - IAI46_23675 0.76 -0.1 5,036,970 - IAI46_23675 0.76 -0.1 5,036,970 - IAI46_23675 0.76 -0.0 5,037,035 - IAI46_23675 0.82 +0.1 5,037,035 - IAI46_23675 0.82 +0.9 5,037,096 + IAI46_23675 0.88 -0.1 5,037,096 + IAI46_23675 0.88 -0.4 5,037,150 + -0.3 5,037,150 + +0.6 5,037,150 + +0.5 5,037,150 + +0.6 5,037,150 + -0.0 5,037,150 + +0.0 5,037,151 - -0.0 5,037,151 - +1.2 5,037,151 - +0.1 5,037,151 - -0.0 5,037,151 - -0.3 5,037,190 + -0.1 5,037,191 - -0.3 5,037,194 + +1.3 5,037,195 - -0.7 5,037,195 - -0.1 5,037,195 - +0.2 5,037,205 + +0.0 5,037,205 + +0.3 5,037,205 + -1.2 5,037,205 + -0.9 5,037,206 - -0.2 5,037,216 - -0.9 5,037,232 + +1.4 5,037,232 + +0.4 5,037,318 - IAI46_23680 0.15 -0.4 5,037,321 + IAI46_23680 0.15 +1.4 5,037,321 + IAI46_23680 0.15 -0.5 5,037,324 - IAI46_23680 0.16 +0.0 5,037,324 - IAI46_23680 0.16 -0.7 5,037,329 + IAI46_23680 0.16 -0.1 5,037,330 - IAI46_23680 0.17 +0.4 5,037,330 - IAI46_23680 0.17 +0.2 5,037,375 + IAI46_23680 0.23 +0.5 5,037,375 + IAI46_23680 0.23 -0.4 5,037,376 - IAI46_23680 0.23 +0.8 5,037,492 + IAI46_23680 0.40 -0.4 5,037,596 - IAI46_23680 0.55 +1.3 5,037,659 + IAI46_23680 0.64 +0.1 5,037,660 - IAI46_23680 0.64 -1.2 5,037,660 - IAI46_23680 0.64 -0.3 5,037,739 + IAI46_23680 0.75 +0.5 5,037,739 + IAI46_23680 0.75 -0.2 5,037,740 - IAI46_23680 0.75 -0.3 5,037,823 - IAI46_23680 0.87 +0.1 5,037,829 - IAI46_23680 0.88 +0.1 5,038,209 + IAI46_23685 0.45 -0.3 5,038,210 - IAI46_23685 0.45 -0.2
Or see this region's nucleotide sequence