Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_22380 and IAI46_22385 are separated by 231 nucleotides IAI46_22385 and IAI46_22390 are separated by 195 nucleotides
IAI46_22380: IAI46_22380 - cell division protein ZapE, at 4,769,254 to 4,770,381
_22380
IAI46_22385: IAI46_22385 - DUF1043 family protein, at 4,770,613 to 4,771,014
_22385
IAI46_22390: IAI46_22390 - serine endoprotease DegQ, at 4,771,210 to 4,772,580
_22390
Position (kb) 4770
4771
4772 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4769.709 kb on - strand, within IAI46_22380 at 4769.709 kb on - strand, within IAI46_22380 at 4769.777 kb on + strand, within IAI46_22380 at 4769.778 kb on - strand, within IAI46_22380 at 4769.778 kb on - strand, within IAI46_22380 at 4769.853 kb on + strand, within IAI46_22380 at 4769.853 kb on + strand, within IAI46_22380 at 4769.853 kb on + strand, within IAI46_22380 at 4769.875 kb on - strand, within IAI46_22380 at 4769.875 kb on - strand, within IAI46_22380 at 4770.076 kb on + strand, within IAI46_22380 at 4770.076 kb on + strand, within IAI46_22380 at 4770.077 kb on - strand, within IAI46_22380 at 4770.077 kb on - strand, within IAI46_22380 at 4770.111 kb on + strand, within IAI46_22380 at 4770.153 kb on + strand, within IAI46_22380 at 4770.153 kb on + strand, within IAI46_22380 at 4770.153 kb on + strand, within IAI46_22380 at 4770.154 kb on - strand, within IAI46_22380 at 4770.154 kb on - strand, within IAI46_22380 at 4770.154 kb on - strand, within IAI46_22380 at 4770.154 kb on - strand, within IAI46_22380 at 4770.154 kb on - strand, within IAI46_22380 at 4770.154 kb on - strand, within IAI46_22380 at 4770.154 kb on - strand, within IAI46_22380 at 4770.154 kb on - strand, within IAI46_22380 at 4770.155 kb on + strand, within IAI46_22380 at 4770.155 kb on + strand, within IAI46_22380 at 4770.155 kb on + strand, within IAI46_22380 at 4770.155 kb on + strand, within IAI46_22380 at 4770.155 kb on + strand, within IAI46_22380 at 4770.156 kb on - strand, within IAI46_22380 at 4770.156 kb on - strand, within IAI46_22380 at 4770.156 kb on - strand, within IAI46_22380 at 4770.156 kb on - strand, within IAI46_22380 at 4770.156 kb on - strand, within IAI46_22380 at 4770.156 kb on - strand, within IAI46_22380 at 4770.156 kb on - strand, within IAI46_22380 at 4770.156 kb on - strand, within IAI46_22380 at 4770.156 kb on - strand, within IAI46_22380 at 4770.156 kb on - strand, within IAI46_22380 at 4770.156 kb on - strand, within IAI46_22380 at 4770.156 kb on - strand, within IAI46_22380 at 4770.157 kb on + strand, within IAI46_22380 at 4770.157 kb on + strand, within IAI46_22380 at 4770.157 kb on + strand, within IAI46_22380 at 4770.157 kb on + strand, within IAI46_22380 at 4770.157 kb on + strand, within IAI46_22380 at 4770.157 kb on + strand, within IAI46_22380 at 4770.158 kb on - strand, within IAI46_22380 at 4770.158 kb on - strand, within IAI46_22380 at 4770.158 kb on - strand, within IAI46_22380 at 4770.158 kb on - strand, within IAI46_22380 at 4770.158 kb on - strand, within IAI46_22380 at 4770.158 kb on - strand, within IAI46_22380 at 4770.256 kb on + strand, within IAI46_22380 at 4770.275 kb on + strand at 4770.275 kb on + strand at 4770.275 kb on + strand at 4770.276 kb on - strand at 4770.276 kb on - strand at 4770.276 kb on - strand at 4770.276 kb on - strand at 4770.276 kb on - strand at 4770.279 kb on + strand at 4770.279 kb on + strand at 4770.279 kb on + strand at 4770.279 kb on + strand at 4770.279 kb on + strand at 4770.280 kb on - strand at 4770.280 kb on - strand at 4770.327 kb on - strand at 4770.327 kb on - strand at 4770.397 kb on + strand at 4770.415 kb on - strand at 4770.437 kb on - strand at 4770.439 kb on + strand at 4770.458 kb on + strand at 4770.458 kb on + strand at 4770.552 kb on - strand at 4770.553 kb on + strand at 4770.563 kb on + strand at 4770.567 kb on - strand at 4770.602 kb on + strand at 4770.603 kb on - strand at 4770.729 kb on + strand, within IAI46_22385 at 4770.832 kb on + strand, within IAI46_22385 at 4770.832 kb on + strand, within IAI46_22385 at 4770.833 kb on - strand, within IAI46_22385 at 4770.840 kb on + strand, within IAI46_22385 at 4771.066 kb on - strand at 4771.066 kb on - strand at 4771.066 kb on - strand at 4771.087 kb on + strand at 4771.087 kb on + strand at 4771.137 kb on + strand at 4771.147 kb on + strand at 4771.147 kb on + strand at 4771.148 kb on - strand at 4771.152 kb on + strand at 4771.166 kb on + strand at 4771.166 kb on + strand at 4771.166 kb on + strand at 4771.167 kb on - strand at 4771.175 kb on + strand at 4771.175 kb on + strand at 4771.176 kb on - strand at 4771.202 kb on + strand at 4771.202 kb on + strand at 4771.202 kb on + strand at 4771.202 kb on + strand at 4771.203 kb on - strand at 4771.234 kb on - strand at 4771.251 kb on + strand at 4771.394 kb on + strand, within IAI46_22390 at 4771.395 kb on - strand, within IAI46_22390 at 4771.519 kb on + strand, within IAI46_22390 at 4771.519 kb on + strand, within IAI46_22390 at 4771.520 kb on - strand, within IAI46_22390 at 4771.520 kb on - strand, within IAI46_22390 at 4771.520 kb on - strand, within IAI46_22390 at 4771.557 kb on + strand, within IAI46_22390 at 4771.568 kb on + strand, within IAI46_22390 at 4771.569 kb on - strand, within IAI46_22390 at 4771.693 kb on - strand, within IAI46_22390
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 4,769,709 - IAI46_22380 0.40 -0.4 4,769,709 - IAI46_22380 0.40 -0.2 4,769,777 + IAI46_22380 0.46 -0.6 4,769,778 - IAI46_22380 0.46 -0.3 4,769,778 - IAI46_22380 0.46 +0.3 4,769,853 + IAI46_22380 0.53 +1.1 4,769,853 + IAI46_22380 0.53 +0.8 4,769,853 + IAI46_22380 0.53 +0.6 4,769,875 - IAI46_22380 0.55 -0.4 4,769,875 - IAI46_22380 0.55 +0.3 4,770,076 + IAI46_22380 0.73 +1.1 4,770,076 + IAI46_22380 0.73 +0.0 4,770,077 - IAI46_22380 0.73 -0.2 4,770,077 - IAI46_22380 0.73 +1.3 4,770,111 + IAI46_22380 0.76 -0.3 4,770,153 + IAI46_22380 0.80 +0.2 4,770,153 + IAI46_22380 0.80 -0.4 4,770,153 + IAI46_22380 0.80 -0.2 4,770,154 - IAI46_22380 0.80 -0.1 4,770,154 - IAI46_22380 0.80 -0.1 4,770,154 - IAI46_22380 0.80 -0.2 4,770,154 - IAI46_22380 0.80 +0.3 4,770,154 - IAI46_22380 0.80 +1.6 4,770,154 - IAI46_22380 0.80 -0.8 4,770,154 - IAI46_22380 0.80 -0.7 4,770,154 - IAI46_22380 0.80 -0.1 4,770,155 + IAI46_22380 0.80 +0.2 4,770,155 + IAI46_22380 0.80 -0.5 4,770,155 + IAI46_22380 0.80 +1.0 4,770,155 + IAI46_22380 0.80 +0.7 4,770,155 + IAI46_22380 0.80 +0.2 4,770,156 - IAI46_22380 0.80 +1.2 4,770,156 - IAI46_22380 0.80 -0.1 4,770,156 - IAI46_22380 0.80 -0.9 4,770,156 - IAI46_22380 0.80 -1.4 4,770,156 - IAI46_22380 0.80 -0.6 4,770,156 - IAI46_22380 0.80 +0.9 4,770,156 - IAI46_22380 0.80 +1.1 4,770,156 - IAI46_22380 0.80 +0.9 4,770,156 - IAI46_22380 0.80 +0.2 4,770,156 - IAI46_22380 0.80 -0.3 4,770,156 - IAI46_22380 0.80 -1.7 4,770,156 - IAI46_22380 0.80 +0.4 4,770,157 + IAI46_22380 0.80 -0.0 4,770,157 + IAI46_22380 0.80 -0.4 4,770,157 + IAI46_22380 0.80 -1.4 4,770,157 + IAI46_22380 0.80 +0.4 4,770,157 + IAI46_22380 0.80 +0.4 4,770,157 + IAI46_22380 0.80 +0.8 4,770,158 - IAI46_22380 0.80 +0.6 4,770,158 - IAI46_22380 0.80 +1.4 4,770,158 - IAI46_22380 0.80 +0.4 4,770,158 - IAI46_22380 0.80 +1.7 4,770,158 - IAI46_22380 0.80 +0.7 4,770,158 - IAI46_22380 0.80 -0.4 4,770,256 + IAI46_22380 0.89 +1.1 4,770,275 + +0.1 4,770,275 + +0.2 4,770,275 + -0.1 4,770,276 - +0.2 4,770,276 - +0.5 4,770,276 - +0.6 4,770,276 - +0.1 4,770,276 - -0.5 4,770,279 + -0.1 4,770,279 + +0.7 4,770,279 + +1.5 4,770,279 + -0.4 4,770,279 + +1.0 4,770,280 - +0.5 4,770,280 - +0.2 4,770,327 - +0.2 4,770,327 - +2.0 4,770,397 + +0.2 4,770,415 - +0.3 4,770,437 - -0.9 4,770,439 + -0.8 4,770,458 + -0.7 4,770,458 + -1.3 4,770,552 - +0.0 4,770,553 + -0.3 4,770,563 + -0.4 4,770,567 - +1.1 4,770,602 + -0.3 4,770,603 - -0.8 4,770,729 + IAI46_22385 0.29 -0.4 4,770,832 + IAI46_22385 0.54 +0.5 4,770,832 + IAI46_22385 0.54 +0.4 4,770,833 - IAI46_22385 0.55 -0.5 4,770,840 + IAI46_22385 0.56 +0.5 4,771,066 - -0.3 4,771,066 - +0.3 4,771,066 - +0.1 4,771,087 + +0.2 4,771,087 + -0.1 4,771,137 + -0.1 4,771,147 + -0.7 4,771,147 + +0.1 4,771,148 - +0.4 4,771,152 + +0.1 4,771,166 + +0.3 4,771,166 + -0.1 4,771,166 + -0.6 4,771,167 - -1.8 4,771,175 + -0.0 4,771,175 + +1.1 4,771,176 - -2.3 4,771,202 + +1.2 4,771,202 + -0.0 4,771,202 + -0.1 4,771,202 + +0.4 4,771,203 - +1.1 4,771,234 - +0.8 4,771,251 + -1.0 4,771,394 + IAI46_22390 0.13 -0.3 4,771,395 - IAI46_22390 0.13 -0.6 4,771,519 + IAI46_22390 0.23 +0.2 4,771,519 + IAI46_22390 0.23 +1.0 4,771,520 - IAI46_22390 0.23 +1.1 4,771,520 - IAI46_22390 0.23 +0.4 4,771,520 - IAI46_22390 0.23 +0.7 4,771,557 + IAI46_22390 0.25 -0.8 4,771,568 + IAI46_22390 0.26 +1.2 4,771,569 - IAI46_22390 0.26 -1.4 4,771,693 - IAI46_22390 0.35 -0.2
Or see this region's nucleotide sequence