Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_19450 and IAI46_19455 are separated by 10 nucleotides IAI46_19455 and IAI46_19460 are separated by 128 nucleotides
IAI46_19450: IAI46_19450 - nitrogen regulatory protein P-II, at 4,107,558 to 4,107,896
_19450
IAI46_19455: IAI46_19455 - NAD+ synthase, at 4,107,907 to 4,109,529
_19455
IAI46_19460: IAI46_19460 - two-component system response regulator GlrR, at 4,109,658 to 4,110,995
_19460
Position (kb)
4107
4108
4109
4110 Strain fitness (log2 ratio)
-1
0
1
2 at 4106.945 kb on + strand at 4106.945 kb on + strand at 4106.945 kb on + strand at 4106.946 kb on - strand at 4106.946 kb on - strand at 4106.946 kb on - strand at 4106.953 kb on + strand at 4106.954 kb on - strand at 4106.954 kb on - strand at 4106.954 kb on - strand at 4107.018 kb on - strand at 4107.054 kb on + strand at 4107.072 kb on + strand at 4107.072 kb on + strand at 4107.102 kb on - strand at 4107.109 kb on + strand at 4107.110 kb on - strand at 4107.110 kb on - strand at 4107.110 kb on - strand at 4107.135 kb on + strand at 4107.136 kb on - strand at 4107.350 kb on + strand at 4107.350 kb on + strand at 4107.359 kb on + strand at 4107.359 kb on + strand at 4107.408 kb on - strand at 4107.559 kb on + strand at 4107.560 kb on - strand at 4107.560 kb on - strand at 4107.594 kb on - strand, within IAI46_19450 at 4107.594 kb on - strand, within IAI46_19450 at 4107.745 kb on + strand, within IAI46_19450 at 4107.745 kb on + strand, within IAI46_19450 at 4107.746 kb on - strand, within IAI46_19450 at 4107.761 kb on - strand, within IAI46_19450 at 4107.875 kb on + strand at 4107.879 kb on - strand at 4109.547 kb on - strand at 4109.547 kb on - strand at 4109.550 kb on - strand at 4109.550 kb on - strand at 4109.602 kb on - strand at 4109.757 kb on - strand at 4109.788 kb on + strand at 4109.788 kb on + strand at 4109.788 kb on + strand at 4109.788 kb on + strand at 4109.807 kb on + strand, within IAI46_19460 at 4109.807 kb on + strand, within IAI46_19460 at 4109.808 kb on - strand, within IAI46_19460 at 4109.880 kb on - strand, within IAI46_19460 at 4110.054 kb on - strand, within IAI46_19460 at 4110.112 kb on + strand, within IAI46_19460 at 4110.113 kb on - strand, within IAI46_19460 at 4110.176 kb on + strand, within IAI46_19460 at 4110.183 kb on + strand, within IAI46_19460 at 4110.183 kb on + strand, within IAI46_19460 at 4110.184 kb on - strand, within IAI46_19460 at 4110.184 kb on - strand, within IAI46_19460 at 4110.275 kb on + strand, within IAI46_19460 at 4110.420 kb on - strand, within IAI46_19460 at 4110.420 kb on - strand, within IAI46_19460 at 4110.497 kb on + strand, within IAI46_19460
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 4,106,945 + +0.7 4,106,945 + +1.7 4,106,945 + -0.3 4,106,946 - +0.6 4,106,946 - +0.1 4,106,946 - -0.8 4,106,953 + -0.7 4,106,954 - +0.6 4,106,954 - +1.4 4,106,954 - +0.2 4,107,018 - +0.2 4,107,054 + +0.1 4,107,072 + +0.9 4,107,072 + -0.4 4,107,102 - -0.1 4,107,109 + +0.4 4,107,110 - +0.4 4,107,110 - -0.8 4,107,110 - +1.0 4,107,135 + -0.5 4,107,136 - +0.2 4,107,350 + -0.9 4,107,350 + +0.9 4,107,359 + +0.2 4,107,359 + +0.6 4,107,408 - +0.6 4,107,559 + +0.9 4,107,560 - +1.1 4,107,560 - +0.7 4,107,594 - IAI46_19450 0.11 -1.2 4,107,594 - IAI46_19450 0.11 -0.5 4,107,745 + IAI46_19450 0.55 -1.4 4,107,745 + IAI46_19450 0.55 +0.5 4,107,746 - IAI46_19450 0.55 +0.2 4,107,761 - IAI46_19450 0.60 -0.0 4,107,875 + -1.3 4,107,879 - -0.4 4,109,547 - +0.9 4,109,547 - +0.3 4,109,550 - -0.8 4,109,550 - +2.3 4,109,602 - +0.1 4,109,757 - +0.4 4,109,788 + -0.1 4,109,788 + +0.4 4,109,788 + +0.8 4,109,788 + +0.4 4,109,807 + IAI46_19460 0.11 -0.1 4,109,807 + IAI46_19460 0.11 +0.7 4,109,808 - IAI46_19460 0.11 +0.4 4,109,880 - IAI46_19460 0.17 +0.2 4,110,054 - IAI46_19460 0.30 +1.2 4,110,112 + IAI46_19460 0.34 -0.6 4,110,113 - IAI46_19460 0.34 -0.6 4,110,176 + IAI46_19460 0.39 +0.5 4,110,183 + IAI46_19460 0.39 -0.2 4,110,183 + IAI46_19460 0.39 +0.3 4,110,184 - IAI46_19460 0.39 -1.5 4,110,184 - IAI46_19460 0.39 +1.3 4,110,275 + IAI46_19460 0.46 -0.6 4,110,420 - IAI46_19460 0.57 -1.3 4,110,420 - IAI46_19460 0.57 +0.2 4,110,497 + IAI46_19460 0.63 +0.1
Or see this region's nucleotide sequence