Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_19305 and IAI46_19310 are separated by 1 nucleotides IAI46_19310 and IAI46_19315 are separated by 57 nucleotides IAI46_19315 and IAI46_19320 are separated by 91 nucleotides
IAI46_19305: IAI46_19305 - Na+/H+ antiporter NhaC, at 4,075,071 to 4,076,510
_19305
IAI46_19310: IAI46_19310 - pyridoxal phosphate-dependent aminotransferase, at 4,076,512 to 4,077,696
_19310
IAI46_19315: IAI46_19315 - enhanced serine sensitivity protein SseB, at 4,077,754 to 4,078,584
_19315
IAI46_19320: IAI46_19320 - aminopeptidase PepB, at 4,078,676 to 4,079,971
_19320
Position (kb)
4076
4077
4078 Strain fitness (log2 ratio)
-1
0
1
2 at 4075.624 kb on - strand, within IAI46_19305 at 4075.631 kb on + strand, within IAI46_19305 at 4075.647 kb on + strand, within IAI46_19305 at 4075.647 kb on + strand, within IAI46_19305 at 4075.647 kb on + strand, within IAI46_19305 at 4075.647 kb on + strand, within IAI46_19305 at 4075.648 kb on - strand, within IAI46_19305 at 4075.648 kb on - strand, within IAI46_19305 at 4075.648 kb on - strand, within IAI46_19305 at 4075.686 kb on + strand, within IAI46_19305 at 4075.686 kb on + strand, within IAI46_19305 at 4075.686 kb on + strand, within IAI46_19305 at 4075.728 kb on - strand, within IAI46_19305 at 4075.774 kb on - strand, within IAI46_19305 at 4075.891 kb on + strand, within IAI46_19305 at 4075.892 kb on - strand, within IAI46_19305 at 4075.946 kb on + strand, within IAI46_19305 at 4076.147 kb on + strand, within IAI46_19305 at 4076.279 kb on + strand, within IAI46_19305 at 4076.355 kb on + strand, within IAI46_19305 at 4076.355 kb on + strand, within IAI46_19305 at 4076.356 kb on - strand, within IAI46_19305 at 4076.356 kb on - strand, within IAI46_19305 at 4076.357 kb on + strand, within IAI46_19305 at 4076.357 kb on + strand, within IAI46_19305 at 4076.357 kb on + strand, within IAI46_19305 at 4076.415 kb on + strand at 4076.416 kb on - strand at 4076.443 kb on - strand at 4076.498 kb on + strand at 4076.530 kb on - strand at 4076.696 kb on + strand, within IAI46_19310 at 4076.725 kb on + strand, within IAI46_19310 at 4076.729 kb on - strand, within IAI46_19310 at 4076.729 kb on - strand, within IAI46_19310 at 4076.881 kb on + strand, within IAI46_19310 at 4076.882 kb on - strand, within IAI46_19310 at 4077.100 kb on + strand, within IAI46_19310 at 4077.115 kb on - strand, within IAI46_19310 at 4077.368 kb on - strand, within IAI46_19310 at 4077.406 kb on + strand, within IAI46_19310 at 4077.406 kb on + strand, within IAI46_19310 at 4077.407 kb on - strand, within IAI46_19310 at 4077.407 kb on - strand, within IAI46_19310 at 4077.448 kb on + strand, within IAI46_19310 at 4077.448 kb on + strand, within IAI46_19310 at 4077.449 kb on - strand, within IAI46_19310 at 4077.449 kb on - strand, within IAI46_19310 at 4077.490 kb on + strand, within IAI46_19310 at 4077.490 kb on + strand, within IAI46_19310 at 4077.490 kb on + strand, within IAI46_19310 at 4077.491 kb on - strand, within IAI46_19310 at 4077.491 kb on - strand, within IAI46_19310 at 4077.491 kb on - strand, within IAI46_19310 at 4077.491 kb on - strand, within IAI46_19310 at 4077.681 kb on - strand at 4077.783 kb on + strand at 4077.784 kb on - strand at 4077.786 kb on + strand at 4077.787 kb on - strand at 4077.816 kb on - strand at 4077.842 kb on + strand, within IAI46_19315 at 4077.843 kb on - strand, within IAI46_19315 at 4078.100 kb on + strand, within IAI46_19315 at 4078.132 kb on - strand, within IAI46_19315 at 4078.144 kb on - strand, within IAI46_19315 at 4078.144 kb on - strand, within IAI46_19315 at 4078.145 kb on + strand, within IAI46_19315 at 4078.145 kb on + strand, within IAI46_19315 at 4078.231 kb on - strand, within IAI46_19315 at 4078.273 kb on + strand, within IAI46_19315 at 4078.334 kb on - strand, within IAI46_19315 at 4078.390 kb on - strand, within IAI46_19315 at 4078.435 kb on + strand, within IAI46_19315 at 4078.436 kb on - strand, within IAI46_19315
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 4,075,624 - IAI46_19305 0.38 -0.1 4,075,631 + IAI46_19305 0.39 +1.8 4,075,647 + IAI46_19305 0.40 -0.2 4,075,647 + IAI46_19305 0.40 +0.5 4,075,647 + IAI46_19305 0.40 +0.4 4,075,647 + IAI46_19305 0.40 -0.5 4,075,648 - IAI46_19305 0.40 -1.1 4,075,648 - IAI46_19305 0.40 +1.1 4,075,648 - IAI46_19305 0.40 -0.7 4,075,686 + IAI46_19305 0.43 -0.5 4,075,686 + IAI46_19305 0.43 +0.1 4,075,686 + IAI46_19305 0.43 -0.3 4,075,728 - IAI46_19305 0.46 +0.4 4,075,774 - IAI46_19305 0.49 -0.5 4,075,891 + IAI46_19305 0.57 -0.7 4,075,892 - IAI46_19305 0.57 -0.2 4,075,946 + IAI46_19305 0.61 +0.6 4,076,147 + IAI46_19305 0.75 +0.4 4,076,279 + IAI46_19305 0.84 +1.5 4,076,355 + IAI46_19305 0.89 -0.1 4,076,355 + IAI46_19305 0.89 +1.1 4,076,356 - IAI46_19305 0.89 +1.9 4,076,356 - IAI46_19305 0.89 -0.3 4,076,357 + IAI46_19305 0.89 +0.1 4,076,357 + IAI46_19305 0.89 +0.3 4,076,357 + IAI46_19305 0.89 -0.3 4,076,415 + -0.0 4,076,416 - +0.6 4,076,443 - +0.8 4,076,498 + -0.6 4,076,530 - -1.5 4,076,696 + IAI46_19310 0.16 +0.3 4,076,725 + IAI46_19310 0.18 +0.3 4,076,729 - IAI46_19310 0.18 +1.2 4,076,729 - IAI46_19310 0.18 +0.9 4,076,881 + IAI46_19310 0.31 -0.3 4,076,882 - IAI46_19310 0.31 +0.3 4,077,100 + IAI46_19310 0.50 -0.2 4,077,115 - IAI46_19310 0.51 +1.1 4,077,368 - IAI46_19310 0.72 +0.9 4,077,406 + IAI46_19310 0.75 -0.0 4,077,406 + IAI46_19310 0.75 -0.4 4,077,407 - IAI46_19310 0.76 +0.2 4,077,407 - IAI46_19310 0.76 +0.7 4,077,448 + IAI46_19310 0.79 +0.2 4,077,448 + IAI46_19310 0.79 +1.2 4,077,449 - IAI46_19310 0.79 -0.7 4,077,449 - IAI46_19310 0.79 +0.7 4,077,490 + IAI46_19310 0.83 +0.6 4,077,490 + IAI46_19310 0.83 -0.7 4,077,490 + IAI46_19310 0.83 +0.5 4,077,491 - IAI46_19310 0.83 +0.2 4,077,491 - IAI46_19310 0.83 +0.7 4,077,491 - IAI46_19310 0.83 -0.3 4,077,491 - IAI46_19310 0.83 -0.4 4,077,681 - +0.4 4,077,783 + +1.6 4,077,784 - -0.2 4,077,786 + +0.3 4,077,787 - +0.5 4,077,816 - -0.3 4,077,842 + IAI46_19315 0.11 -0.3 4,077,843 - IAI46_19315 0.11 -0.3 4,078,100 + IAI46_19315 0.42 +1.2 4,078,132 - IAI46_19315 0.45 -0.1 4,078,144 - IAI46_19315 0.47 +1.4 4,078,144 - IAI46_19315 0.47 -0.1 4,078,145 + IAI46_19315 0.47 +0.6 4,078,145 + IAI46_19315 0.47 +0.4 4,078,231 - IAI46_19315 0.57 -0.0 4,078,273 + IAI46_19315 0.62 -0.7 4,078,334 - IAI46_19315 0.70 +0.3 4,078,390 - IAI46_19315 0.77 -0.9 4,078,435 + IAI46_19315 0.82 -1.2 4,078,436 - IAI46_19315 0.82 +0.3
Or see this region's nucleotide sequence