Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_18180 and IAI46_18185 are separated by 121 nucleotides IAI46_18185 and IAI46_18190 are separated by 169 nucleotides IAI46_18190 and IAI46_18195 are separated by 90 nucleotides
IAI46_18180: IAI46_18180 - alanine transaminase, at 3,827,026 to 3,828,264
_18180
IAI46_18185: IAI46_18185 - GNAT family N-acetyltransferase, at 3,828,386 to 3,828,925
_18185
IAI46_18190: IAI46_18190 - DUF1479 domain-containing protein, at 3,829,095 to 3,830,339
_18190
IAI46_18195: IAI46_18195 - sensor histidine kinase, at 3,830,430 to 3,832,139
_18195
Position (kb)
3829
3830
3831 Strain fitness (log2 ratio)
-2
-1
0
1 at 3828.154 kb on - strand at 3828.205 kb on + strand at 3828.209 kb on + strand at 3828.209 kb on + strand at 3828.228 kb on + strand at 3828.229 kb on - strand at 3828.256 kb on - strand at 3828.343 kb on + strand at 3828.343 kb on + strand at 3828.343 kb on + strand at 3828.343 kb on + strand at 3828.344 kb on - strand at 3828.344 kb on - strand at 3828.344 kb on - strand at 3828.391 kb on + strand at 3828.459 kb on + strand, within IAI46_18185 at 3828.463 kb on + strand, within IAI46_18185 at 3828.464 kb on - strand, within IAI46_18185 at 3828.523 kb on + strand, within IAI46_18185 at 3828.524 kb on - strand, within IAI46_18185 at 3828.526 kb on + strand, within IAI46_18185 at 3828.527 kb on - strand, within IAI46_18185 at 3828.527 kb on - strand, within IAI46_18185 at 3828.646 kb on - strand, within IAI46_18185 at 3828.666 kb on + strand, within IAI46_18185 at 3828.666 kb on + strand, within IAI46_18185 at 3828.671 kb on + strand, within IAI46_18185 at 3828.702 kb on - strand, within IAI46_18185 at 3828.731 kb on + strand, within IAI46_18185 at 3828.756 kb on + strand, within IAI46_18185 at 3828.826 kb on + strand, within IAI46_18185 at 3828.826 kb on + strand, within IAI46_18185 at 3828.828 kb on + strand, within IAI46_18185 at 3828.829 kb on - strand, within IAI46_18185 at 3828.829 kb on - strand, within IAI46_18185 at 3828.829 kb on - strand, within IAI46_18185 at 3828.852 kb on + strand, within IAI46_18185 at 3828.853 kb on - strand, within IAI46_18185 at 3828.853 kb on - strand, within IAI46_18185 at 3829.051 kb on + strand at 3829.118 kb on + strand at 3829.142 kb on + strand at 3829.404 kb on + strand, within IAI46_18190 at 3829.405 kb on - strand, within IAI46_18190 at 3829.405 kb on - strand, within IAI46_18190 at 3829.405 kb on - strand, within IAI46_18190 at 3829.458 kb on + strand, within IAI46_18190 at 3829.458 kb on + strand, within IAI46_18190 at 3829.458 kb on + strand, within IAI46_18190 at 3829.459 kb on - strand, within IAI46_18190 at 3829.459 kb on - strand, within IAI46_18190 at 3829.459 kb on - strand, within IAI46_18190 at 3829.459 kb on - strand, within IAI46_18190 at 3829.459 kb on - strand, within IAI46_18190 at 3829.459 kb on - strand, within IAI46_18190 at 3829.500 kb on - strand, within IAI46_18190 at 3829.632 kb on + strand, within IAI46_18190 at 3829.744 kb on - strand, within IAI46_18190 at 3829.776 kb on + strand, within IAI46_18190 at 3829.777 kb on - strand, within IAI46_18190 at 3829.935 kb on + strand, within IAI46_18190 at 3829.936 kb on - strand, within IAI46_18190 at 3830.038 kb on + strand, within IAI46_18190 at 3830.039 kb on - strand, within IAI46_18190 at 3830.041 kb on + strand, within IAI46_18190 at 3830.129 kb on + strand, within IAI46_18190 at 3830.157 kb on + strand, within IAI46_18190 at 3830.196 kb on + strand, within IAI46_18190 at 3830.196 kb on + strand, within IAI46_18190 at 3830.337 kb on + strand at 3830.390 kb on + strand at 3830.390 kb on + strand at 3830.390 kb on + strand at 3830.390 kb on + strand at 3830.391 kb on - strand at 3830.391 kb on - strand at 3830.392 kb on + strand at 3830.549 kb on + strand at 3830.549 kb on + strand at 3830.550 kb on - strand at 3830.733 kb on + strand, within IAI46_18195 at 3830.745 kb on - strand, within IAI46_18195 at 3830.747 kb on - strand, within IAI46_18195 at 3830.810 kb on + strand, within IAI46_18195 at 3830.811 kb on - strand, within IAI46_18195 at 3830.811 kb on - strand, within IAI46_18195 at 3830.811 kb on - strand, within IAI46_18195 at 3830.933 kb on + strand, within IAI46_18195 at 3830.933 kb on + strand, within IAI46_18195 at 3831.095 kb on + strand, within IAI46_18195 at 3831.095 kb on + strand, within IAI46_18195 at 3831.096 kb on - strand, within IAI46_18195 at 3831.192 kb on + strand, within IAI46_18195 at 3831.193 kb on - strand, within IAI46_18195
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 3,828,154 - +0.9 3,828,205 + +0.3 3,828,209 + +0.1 3,828,209 + -0.7 3,828,228 + -0.5 3,828,229 - -0.5 3,828,256 - -0.1 3,828,343 + -0.7 3,828,343 + +0.8 3,828,343 + +0.8 3,828,343 + -0.1 3,828,344 - +0.8 3,828,344 - -0.2 3,828,344 - +0.3 3,828,391 + -1.1 3,828,459 + IAI46_18185 0.14 +0.4 3,828,463 + IAI46_18185 0.14 +0.6 3,828,464 - IAI46_18185 0.14 +0.8 3,828,523 + IAI46_18185 0.25 +0.1 3,828,524 - IAI46_18185 0.26 +0.5 3,828,526 + IAI46_18185 0.26 -1.3 3,828,527 - IAI46_18185 0.26 -0.2 3,828,527 - IAI46_18185 0.26 +0.9 3,828,646 - IAI46_18185 0.48 -0.9 3,828,666 + IAI46_18185 0.52 -1.6 3,828,666 + IAI46_18185 0.52 +0.0 3,828,671 + IAI46_18185 0.53 -0.2 3,828,702 - IAI46_18185 0.59 +1.2 3,828,731 + IAI46_18185 0.64 -0.2 3,828,756 + IAI46_18185 0.69 -2.0 3,828,826 + IAI46_18185 0.81 -0.5 3,828,826 + IAI46_18185 0.81 +0.3 3,828,828 + IAI46_18185 0.82 +0.2 3,828,829 - IAI46_18185 0.82 +1.3 3,828,829 - IAI46_18185 0.82 +1.0 3,828,829 - IAI46_18185 0.82 +1.5 3,828,852 + IAI46_18185 0.86 +1.4 3,828,853 - IAI46_18185 0.86 +0.3 3,828,853 - IAI46_18185 0.86 +0.1 3,829,051 + +0.7 3,829,118 + -0.3 3,829,142 + -0.4 3,829,404 + IAI46_18190 0.25 -1.0 3,829,405 - IAI46_18190 0.25 -0.5 3,829,405 - IAI46_18190 0.25 +0.5 3,829,405 - IAI46_18190 0.25 -0.2 3,829,458 + IAI46_18190 0.29 -0.6 3,829,458 + IAI46_18190 0.29 -1.9 3,829,458 + IAI46_18190 0.29 +0.1 3,829,459 - IAI46_18190 0.29 +0.9 3,829,459 - IAI46_18190 0.29 +0.5 3,829,459 - IAI46_18190 0.29 -0.1 3,829,459 - IAI46_18190 0.29 +0.7 3,829,459 - IAI46_18190 0.29 -0.1 3,829,459 - IAI46_18190 0.29 -0.4 3,829,500 - IAI46_18190 0.33 -0.4 3,829,632 + IAI46_18190 0.43 +0.6 3,829,744 - IAI46_18190 0.52 +0.7 3,829,776 + IAI46_18190 0.55 -1.4 3,829,777 - IAI46_18190 0.55 -0.1 3,829,935 + IAI46_18190 0.67 -1.6 3,829,936 - IAI46_18190 0.68 +0.6 3,830,038 + IAI46_18190 0.76 -0.3 3,830,039 - IAI46_18190 0.76 -0.3 3,830,041 + IAI46_18190 0.76 +1.0 3,830,129 + IAI46_18190 0.83 +0.6 3,830,157 + IAI46_18190 0.85 +0.2 3,830,196 + IAI46_18190 0.88 +0.0 3,830,196 + IAI46_18190 0.88 +0.1 3,830,337 + +0.2 3,830,390 + -2.3 3,830,390 + +0.9 3,830,390 + +0.7 3,830,390 + -1.1 3,830,391 - -0.6 3,830,391 - -0.5 3,830,392 + +0.1 3,830,549 + +0.2 3,830,549 + -0.0 3,830,550 - +0.1 3,830,733 + IAI46_18195 0.18 -0.5 3,830,745 - IAI46_18195 0.18 -0.2 3,830,747 - IAI46_18195 0.19 +0.1 3,830,810 + IAI46_18195 0.22 +0.7 3,830,811 - IAI46_18195 0.22 -0.1 3,830,811 - IAI46_18195 0.22 +0.4 3,830,811 - IAI46_18195 0.22 -0.2 3,830,933 + IAI46_18195 0.29 -0.5 3,830,933 + IAI46_18195 0.29 -1.4 3,831,095 + IAI46_18195 0.39 -0.0 3,831,095 + IAI46_18195 0.39 -0.5 3,831,096 - IAI46_18195 0.39 +0.3 3,831,192 + IAI46_18195 0.45 -0.9 3,831,193 - IAI46_18195 0.45 +0.4
Or see this region's nucleotide sequence