Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_17040 and IAI46_17045 are separated by 161 nucleotides IAI46_17045 and IAI46_17050 are separated by 23 nucleotides
IAI46_17040: IAI46_17040 - sugar transporter, at 3,574,126 to 3,575,316
_17040
IAI46_17045: IAI46_17045 - sugar phosphate isomerase/epimerase, at 3,575,478 to 3,576,419
_17045
IAI46_17050: IAI46_17050 - Gfo/Idh/MocA family oxidoreductase, at 3,576,443 to 3,577,621
_17050
Position (kb)
3575
3576
3577 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3574.611 kb on + strand, within IAI46_17040 at 3574.612 kb on - strand, within IAI46_17040 at 3574.623 kb on + strand, within IAI46_17040 at 3574.626 kb on - strand, within IAI46_17040 at 3574.631 kb on + strand, within IAI46_17040 at 3574.631 kb on + strand, within IAI46_17040 at 3574.631 kb on + strand, within IAI46_17040 at 3574.632 kb on - strand, within IAI46_17040 at 3574.671 kb on + strand, within IAI46_17040 at 3574.672 kb on - strand, within IAI46_17040 at 3574.673 kb on + strand, within IAI46_17040 at 3574.674 kb on - strand, within IAI46_17040 at 3574.674 kb on - strand, within IAI46_17040 at 3575.038 kb on + strand, within IAI46_17040 at 3575.039 kb on - strand, within IAI46_17040 at 3575.039 kb on - strand, within IAI46_17040 at 3575.053 kb on - strand, within IAI46_17040 at 3575.059 kb on + strand, within IAI46_17040 at 3575.112 kb on + strand, within IAI46_17040 at 3575.113 kb on - strand, within IAI46_17040 at 3575.113 kb on - strand, within IAI46_17040 at 3575.147 kb on + strand, within IAI46_17040 at 3575.248 kb on - strand at 3575.300 kb on - strand at 3575.385 kb on + strand at 3575.385 kb on + strand at 3575.499 kb on + strand at 3575.516 kb on + strand at 3575.516 kb on + strand at 3575.517 kb on - strand at 3575.517 kb on - strand at 3575.520 kb on - strand at 3575.520 kb on - strand at 3575.578 kb on + strand, within IAI46_17045 at 3575.579 kb on - strand, within IAI46_17045 at 3575.593 kb on - strand, within IAI46_17045 at 3575.650 kb on + strand, within IAI46_17045 at 3575.651 kb on - strand, within IAI46_17045 at 3575.651 kb on - strand, within IAI46_17045 at 3575.651 kb on - strand, within IAI46_17045 at 3575.928 kb on + strand, within IAI46_17045 at 3576.037 kb on + strand, within IAI46_17045 at 3576.037 kb on + strand, within IAI46_17045 at 3576.038 kb on - strand, within IAI46_17045 at 3576.038 kb on - strand, within IAI46_17045 at 3576.038 kb on - strand, within IAI46_17045 at 3576.038 kb on - strand, within IAI46_17045 at 3576.038 kb on - strand, within IAI46_17045 at 3576.050 kb on + strand, within IAI46_17045 at 3576.438 kb on + strand at 3576.438 kb on + strand at 3576.439 kb on - strand at 3576.439 kb on - strand at 3576.538 kb on - strand at 3576.687 kb on + strand, within IAI46_17050 at 3576.984 kb on + strand, within IAI46_17050 at 3576.984 kb on + strand, within IAI46_17050 at 3577.000 kb on + strand, within IAI46_17050 at 3577.102 kb on + strand, within IAI46_17050 at 3577.103 kb on - strand, within IAI46_17050 at 3577.105 kb on - strand, within IAI46_17050 at 3577.105 kb on - strand, within IAI46_17050 at 3577.105 kb on - strand, within IAI46_17050 at 3577.124 kb on + strand, within IAI46_17050 at 3577.124 kb on + strand, within IAI46_17050 at 3577.194 kb on + strand, within IAI46_17050 at 3577.402 kb on + strand, within IAI46_17050 at 3577.402 kb on + strand, within IAI46_17050 at 3577.402 kb on + strand, within IAI46_17050 at 3577.403 kb on - strand, within IAI46_17050 at 3577.403 kb on - strand, within IAI46_17050 at 3577.417 kb on - strand, within IAI46_17050
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 3,574,611 + IAI46_17040 0.41 +0.8 3,574,612 - IAI46_17040 0.41 +0.7 3,574,623 + IAI46_17040 0.42 +0.2 3,574,626 - IAI46_17040 0.42 +1.1 3,574,631 + IAI46_17040 0.42 -0.2 3,574,631 + IAI46_17040 0.42 +0.4 3,574,631 + IAI46_17040 0.42 -1.4 3,574,632 - IAI46_17040 0.42 +0.5 3,574,671 + IAI46_17040 0.46 -0.2 3,574,672 - IAI46_17040 0.46 +0.2 3,574,673 + IAI46_17040 0.46 -0.5 3,574,674 - IAI46_17040 0.46 -0.1 3,574,674 - IAI46_17040 0.46 +1.3 3,575,038 + IAI46_17040 0.77 -0.7 3,575,039 - IAI46_17040 0.77 -0.2 3,575,039 - IAI46_17040 0.77 +0.3 3,575,053 - IAI46_17040 0.78 -1.0 3,575,059 + IAI46_17040 0.78 -0.2 3,575,112 + IAI46_17040 0.83 +0.2 3,575,113 - IAI46_17040 0.83 -0.2 3,575,113 - IAI46_17040 0.83 +0.0 3,575,147 + IAI46_17040 0.86 +0.1 3,575,248 - -0.5 3,575,300 - +0.3 3,575,385 + -0.1 3,575,385 + +0.2 3,575,499 + +0.8 3,575,516 + +1.0 3,575,516 + -1.2 3,575,517 - -2.4 3,575,517 - +0.4 3,575,520 - +0.2 3,575,520 - -0.5 3,575,578 + IAI46_17045 0.11 +0.2 3,575,579 - IAI46_17045 0.11 -0.1 3,575,593 - IAI46_17045 0.12 +0.7 3,575,650 + IAI46_17045 0.18 +0.1 3,575,651 - IAI46_17045 0.18 -0.8 3,575,651 - IAI46_17045 0.18 +0.5 3,575,651 - IAI46_17045 0.18 +1.8 3,575,928 + IAI46_17045 0.48 +0.4 3,576,037 + IAI46_17045 0.59 +0.8 3,576,037 + IAI46_17045 0.59 +0.4 3,576,038 - IAI46_17045 0.59 -0.3 3,576,038 - IAI46_17045 0.59 -0.4 3,576,038 - IAI46_17045 0.59 -0.6 3,576,038 - IAI46_17045 0.59 +1.8 3,576,038 - IAI46_17045 0.59 +0.8 3,576,050 + IAI46_17045 0.61 +0.1 3,576,438 + -0.9 3,576,438 + -0.5 3,576,439 - -0.4 3,576,439 - -0.0 3,576,538 - +0.5 3,576,687 + IAI46_17050 0.21 -0.7 3,576,984 + IAI46_17050 0.46 +0.6 3,576,984 + IAI46_17050 0.46 -0.4 3,577,000 + IAI46_17050 0.47 -0.3 3,577,102 + IAI46_17050 0.56 +0.1 3,577,103 - IAI46_17050 0.56 +1.0 3,577,105 - IAI46_17050 0.56 -0.2 3,577,105 - IAI46_17050 0.56 +0.2 3,577,105 - IAI46_17050 0.56 +1.0 3,577,124 + IAI46_17050 0.58 -0.4 3,577,124 + IAI46_17050 0.58 +0.4 3,577,194 + IAI46_17050 0.64 +0.1 3,577,402 + IAI46_17050 0.81 -0.3 3,577,402 + IAI46_17050 0.81 +0.1 3,577,402 + IAI46_17050 0.81 -2.1 3,577,403 - IAI46_17050 0.81 -0.0 3,577,403 - IAI46_17050 0.81 -0.8 3,577,417 - IAI46_17050 0.83 +0.1
Or see this region's nucleotide sequence