Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_16730 and IAI46_16735 overlap by 4 nucleotides IAI46_16735 and IAI46_16740 overlap by 8 nucleotides
IAI46_16730: IAI46_16730 - efflux transporter outer membrane subunit, at 3,506,590 to 3,507,993
_16730
IAI46_16735: IAI46_16735 - efflux RND transporter permease subunit, at 3,507,990 to 3,511,163
_16735
IAI46_16740: IAI46_16740 - efflux RND transporter periplasmic adaptor subunit, at 3,511,156 to 3,512,358
_16740
Position (kb)
3507
3508
3509
3510
3511
3512 Strain fitness (log2 ratio)
-1
0
1
2 at 3507.103 kb on + strand, within IAI46_16730 at 3507.296 kb on + strand, within IAI46_16730 at 3507.471 kb on - strand, within IAI46_16730 at 3507.618 kb on - strand, within IAI46_16730 at 3507.711 kb on + strand, within IAI46_16730 at 3507.711 kb on + strand, within IAI46_16730 at 3507.712 kb on - strand, within IAI46_16730 at 3508.213 kb on - strand at 3508.224 kb on - strand at 3508.390 kb on + strand, within IAI46_16735 at 3508.390 kb on + strand, within IAI46_16735 at 3508.391 kb on - strand, within IAI46_16735 at 3508.493 kb on - strand, within IAI46_16735 at 3508.537 kb on + strand, within IAI46_16735 at 3508.736 kb on - strand, within IAI46_16735 at 3508.895 kb on - strand, within IAI46_16735 at 3509.123 kb on + strand, within IAI46_16735 at 3509.123 kb on + strand, within IAI46_16735 at 3509.177 kb on + strand, within IAI46_16735 at 3509.534 kb on - strand, within IAI46_16735 at 3509.808 kb on + strand, within IAI46_16735 at 3509.808 kb on + strand, within IAI46_16735 at 3510.097 kb on + strand, within IAI46_16735 at 3510.097 kb on + strand, within IAI46_16735 at 3510.098 kb on - strand, within IAI46_16735 at 3510.165 kb on - strand, within IAI46_16735 at 3510.322 kb on + strand, within IAI46_16735 at 3510.322 kb on + strand, within IAI46_16735 at 3510.323 kb on - strand, within IAI46_16735 at 3510.325 kb on + strand, within IAI46_16735 at 3510.326 kb on - strand, within IAI46_16735 at 3510.326 kb on - strand, within IAI46_16735 at 3510.326 kb on - strand, within IAI46_16735 at 3510.326 kb on - strand, within IAI46_16735 at 3510.326 kb on - strand, within IAI46_16735 at 3510.329 kb on + strand, within IAI46_16735 at 3510.340 kb on + strand, within IAI46_16735 at 3510.341 kb on - strand, within IAI46_16735 at 3510.577 kb on + strand, within IAI46_16735 at 3510.577 kb on + strand, within IAI46_16735 at 3510.577 kb on + strand, within IAI46_16735 at 3510.620 kb on - strand, within IAI46_16735 at 3510.678 kb on + strand, within IAI46_16735 at 3510.679 kb on - strand, within IAI46_16735 at 3510.679 kb on - strand, within IAI46_16735 at 3510.682 kb on + strand, within IAI46_16735 at 3510.683 kb on - strand, within IAI46_16735 at 3510.683 kb on - strand, within IAI46_16735 at 3510.694 kb on + strand, within IAI46_16735 at 3510.756 kb on - strand, within IAI46_16735 at 3510.756 kb on - strand, within IAI46_16735 at 3510.850 kb on - strand at 3510.934 kb on + strand at 3511.189 kb on + strand at 3511.590 kb on - strand, within IAI46_16740 at 3511.729 kb on + strand, within IAI46_16740 at 3511.730 kb on - strand, within IAI46_16740 at 3511.807 kb on - strand, within IAI46_16740 at 3511.807 kb on - strand, within IAI46_16740 at 3511.807 kb on - strand, within IAI46_16740 at 3511.839 kb on - strand, within IAI46_16740 at 3511.851 kb on + strand, within IAI46_16740 at 3511.851 kb on + strand, within IAI46_16740 at 3511.852 kb on - strand, within IAI46_16740 at 3512.043 kb on - strand, within IAI46_16740 at 3512.132 kb on - strand, within IAI46_16740 at 3512.132 kb on - strand, within IAI46_16740 at 3512.132 kb on - strand, within IAI46_16740 at 3512.132 kb on - strand, within IAI46_16740 at 3512.132 kb on - strand, within IAI46_16740 at 3512.132 kb on - strand, within IAI46_16740 at 3512.133 kb on + strand, within IAI46_16740 at 3512.133 kb on + strand, within IAI46_16740 at 3512.134 kb on - strand, within IAI46_16740
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 3,507,103 + IAI46_16730 0.37 -1.0 3,507,296 + IAI46_16730 0.50 +0.4 3,507,471 - IAI46_16730 0.63 -0.2 3,507,618 - IAI46_16730 0.73 -0.0 3,507,711 + IAI46_16730 0.80 -0.2 3,507,711 + IAI46_16730 0.80 -1.7 3,507,712 - IAI46_16730 0.80 -0.2 3,508,213 - -0.2 3,508,224 - +0.7 3,508,390 + IAI46_16735 0.13 +0.1 3,508,390 + IAI46_16735 0.13 +1.9 3,508,391 - IAI46_16735 0.13 +0.4 3,508,493 - IAI46_16735 0.16 +1.1 3,508,537 + IAI46_16735 0.17 -0.1 3,508,736 - IAI46_16735 0.24 +0.2 3,508,895 - IAI46_16735 0.29 +0.0 3,509,123 + IAI46_16735 0.36 -0.1 3,509,123 + IAI46_16735 0.36 -0.1 3,509,177 + IAI46_16735 0.37 +0.5 3,509,534 - IAI46_16735 0.49 -0.3 3,509,808 + IAI46_16735 0.57 +1.4 3,509,808 + IAI46_16735 0.57 -0.2 3,510,097 + IAI46_16735 0.66 +0.2 3,510,097 + IAI46_16735 0.66 +0.4 3,510,098 - IAI46_16735 0.66 +1.7 3,510,165 - IAI46_16735 0.69 +0.3 3,510,322 + IAI46_16735 0.73 +0.5 3,510,322 + IAI46_16735 0.73 -0.9 3,510,323 - IAI46_16735 0.74 +0.7 3,510,325 + IAI46_16735 0.74 -0.3 3,510,326 - IAI46_16735 0.74 -0.2 3,510,326 - IAI46_16735 0.74 -0.5 3,510,326 - IAI46_16735 0.74 -0.8 3,510,326 - IAI46_16735 0.74 -0.0 3,510,326 - IAI46_16735 0.74 -0.2 3,510,329 + IAI46_16735 0.74 +0.3 3,510,340 + IAI46_16735 0.74 -0.2 3,510,341 - IAI46_16735 0.74 -0.7 3,510,577 + IAI46_16735 0.82 +0.6 3,510,577 + IAI46_16735 0.82 -1.5 3,510,577 + IAI46_16735 0.82 +0.3 3,510,620 - IAI46_16735 0.83 +0.6 3,510,678 + IAI46_16735 0.85 +0.1 3,510,679 - IAI46_16735 0.85 +0.6 3,510,679 - IAI46_16735 0.85 -0.1 3,510,682 + IAI46_16735 0.85 -0.5 3,510,683 - IAI46_16735 0.85 +0.5 3,510,683 - IAI46_16735 0.85 +1.1 3,510,694 + IAI46_16735 0.85 -0.7 3,510,756 - IAI46_16735 0.87 -0.4 3,510,756 - IAI46_16735 0.87 +0.8 3,510,850 - +0.8 3,510,934 + -0.4 3,511,189 + -0.8 3,511,590 - IAI46_16740 0.36 -0.5 3,511,729 + IAI46_16740 0.48 +0.0 3,511,730 - IAI46_16740 0.48 -1.2 3,511,807 - IAI46_16740 0.54 -0.3 3,511,807 - IAI46_16740 0.54 +0.5 3,511,807 - IAI46_16740 0.54 +0.1 3,511,839 - IAI46_16740 0.57 +0.5 3,511,851 + IAI46_16740 0.58 -0.7 3,511,851 + IAI46_16740 0.58 +0.0 3,511,852 - IAI46_16740 0.58 -0.2 3,512,043 - IAI46_16740 0.74 -0.1 3,512,132 - IAI46_16740 0.81 -0.9 3,512,132 - IAI46_16740 0.81 +0.0 3,512,132 - IAI46_16740 0.81 +1.1 3,512,132 - IAI46_16740 0.81 -1.0 3,512,132 - IAI46_16740 0.81 +0.9 3,512,132 - IAI46_16740 0.81 -0.1 3,512,133 + IAI46_16740 0.81 -0.3 3,512,133 + IAI46_16740 0.81 -0.8 3,512,134 - IAI46_16740 0.81 +0.3
Or see this region's nucleotide sequence