Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14005 and IAI46_14010 are separated by 118 nucleotides IAI46_14010 and IAI46_14015 are separated by 48 nucleotides IAI46_14015 and IAI46_14020 are separated by 374 nucleotides
IAI46_14005: IAI46_14005 - hypothetical protein, at 2,974,881 to 2,975,240
_14005
IAI46_14010: IAI46_14010 - threonylcarbamoyl-AMP synthase, at 2,975,359 to 2,975,979
_14010
IAI46_14015: IAI46_14015 - PHP domain-containing protein, at 2,976,028 to 2,976,915
_14015
IAI46_14020: IAI46_14020 - anthranilate synthase component 1, at 2,977,290 to 2,978,849
_14020
Position (kb)
2976
2977 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2975.030 kb on + strand, within IAI46_14005 at 2975.055 kb on - strand, within IAI46_14005 at 2975.075 kb on - strand, within IAI46_14005 at 2975.075 kb on - strand, within IAI46_14005 at 2975.075 kb on - strand, within IAI46_14005 at 2975.081 kb on + strand, within IAI46_14005 at 2975.208 kb on + strand at 2975.209 kb on - strand at 2975.257 kb on + strand at 2975.257 kb on + strand at 2975.258 kb on - strand at 2975.258 kb on - strand at 2975.279 kb on - strand at 2975.349 kb on + strand at 2975.349 kb on + strand at 2975.350 kb on - strand at 2975.353 kb on + strand at 2975.353 kb on + strand at 2975.354 kb on - strand at 2975.691 kb on - strand, within IAI46_14010 at 2975.691 kb on - strand, within IAI46_14010 at 2975.742 kb on - strand, within IAI46_14010 at 2975.742 kb on - strand, within IAI46_14010 at 2975.748 kb on - strand, within IAI46_14010 at 2975.752 kb on - strand, within IAI46_14010 at 2975.752 kb on - strand, within IAI46_14010 at 2975.867 kb on + strand, within IAI46_14010 at 2976.413 kb on + strand, within IAI46_14015 at 2976.414 kb on - strand, within IAI46_14015 at 2976.435 kb on + strand, within IAI46_14015 at 2976.436 kb on - strand, within IAI46_14015 at 2976.654 kb on + strand, within IAI46_14015 at 2976.655 kb on - strand, within IAI46_14015 at 2976.794 kb on - strand, within IAI46_14015 at 2976.876 kb on - strand at 2976.945 kb on + strand at 2976.945 kb on + strand at 2976.945 kb on + strand at 2976.946 kb on - strand at 2976.946 kb on - strand at 2976.980 kb on - strand at 2977.062 kb on - strand at 2977.119 kb on + strand at 2977.120 kb on - strand at 2977.174 kb on - strand at 2977.206 kb on - strand at 2977.206 kb on - strand at 2977.311 kb on - strand at 2977.311 kb on - strand at 2977.466 kb on + strand, within IAI46_14020 at 2977.485 kb on - strand, within IAI46_14020 at 2977.678 kb on + strand, within IAI46_14020 at 2977.740 kb on + strand, within IAI46_14020 at 2977.741 kb on - strand, within IAI46_14020
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 2,975,030 + IAI46_14005 0.41 +0.4 2,975,055 - IAI46_14005 0.48 -1.3 2,975,075 - IAI46_14005 0.54 +0.7 2,975,075 - IAI46_14005 0.54 -0.2 2,975,075 - IAI46_14005 0.54 -0.4 2,975,081 + IAI46_14005 0.56 +0.6 2,975,208 + +0.1 2,975,209 - -0.8 2,975,257 + +0.2 2,975,257 + -0.0 2,975,258 - -0.5 2,975,258 - +0.9 2,975,279 - +0.9 2,975,349 + +0.3 2,975,349 + -0.2 2,975,350 - -0.2 2,975,353 + -1.2 2,975,353 + +1.9 2,975,354 - -0.5 2,975,691 - IAI46_14010 0.53 +0.5 2,975,691 - IAI46_14010 0.53 +1.2 2,975,742 - IAI46_14010 0.62 -0.6 2,975,742 - IAI46_14010 0.62 +0.4 2,975,748 - IAI46_14010 0.63 +0.7 2,975,752 - IAI46_14010 0.63 -0.3 2,975,752 - IAI46_14010 0.63 +0.6 2,975,867 + IAI46_14010 0.82 +1.6 2,976,413 + IAI46_14015 0.43 -0.6 2,976,414 - IAI46_14015 0.43 +0.5 2,976,435 + IAI46_14015 0.46 +0.2 2,976,436 - IAI46_14015 0.46 -0.8 2,976,654 + IAI46_14015 0.70 -0.2 2,976,655 - IAI46_14015 0.71 +0.1 2,976,794 - IAI46_14015 0.86 -2.0 2,976,876 - +1.3 2,976,945 + +0.8 2,976,945 + -0.4 2,976,945 + -0.2 2,976,946 - +0.0 2,976,946 - -0.0 2,976,980 - -0.1 2,977,062 - +0.6 2,977,119 + +0.2 2,977,120 - +0.4 2,977,174 - +1.0 2,977,206 - +0.2 2,977,206 - +0.3 2,977,311 - +2.0 2,977,311 - +0.6 2,977,466 + IAI46_14020 0.11 -0.3 2,977,485 - IAI46_14020 0.12 +1.1 2,977,678 + IAI46_14020 0.25 -0.0 2,977,740 + IAI46_14020 0.29 -1.3 2,977,741 - IAI46_14020 0.29 -1.2
Or see this region's nucleotide sequence