Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_13880 and IAI46_13885 are separated by 147 nucleotides IAI46_13885 and IAI46_13890 are separated by 4 nucleotides
IAI46_13880: IAI46_13880 - fructose-6-phosphate aldolase, at 2,949,167 to 2,949,832
_13880
IAI46_13885: IAI46_13885 - glycyl-radical enzyme activating protein, at 2,949,980 to 2,950,879
_13885
IAI46_13890: IAI46_13890 - formate C-acetyltransferase/glycerol dehydratase family glycyl radical enzyme, at 2,950,884 to 2,953,316
_13890
Position (kb)
2949
2950
2951 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2949.078 kb on + strand at 2949.158 kb on - strand at 2949.182 kb on - strand at 2949.182 kb on - strand at 2949.442 kb on - strand, within IAI46_13880 at 2949.442 kb on - strand, within IAI46_13880 at 2949.453 kb on + strand, within IAI46_13880 at 2949.499 kb on - strand, within IAI46_13880 at 2949.647 kb on - strand, within IAI46_13880 at 2949.834 kb on - strand at 2949.877 kb on + strand at 2949.877 kb on + strand at 2949.877 kb on + strand at 2949.878 kb on - strand at 2949.878 kb on - strand at 2949.878 kb on - strand at 2950.001 kb on + strand at 2950.035 kb on + strand at 2950.441 kb on + strand, within IAI46_13885 at 2950.465 kb on + strand, within IAI46_13885 at 2950.482 kb on + strand, within IAI46_13885 at 2950.483 kb on - strand, within IAI46_13885 at 2950.581 kb on + strand, within IAI46_13885 at 2950.760 kb on + strand, within IAI46_13885 at 2950.761 kb on - strand, within IAI46_13885 at 2950.803 kb on + strand at 2950.826 kb on + strand at 2950.989 kb on + strand at 2951.002 kb on - strand at 2951.152 kb on - strand, within IAI46_13890 at 2951.152 kb on - strand, within IAI46_13890 at 2951.152 kb on - strand, within IAI46_13890 at 2951.399 kb on - strand, within IAI46_13890 at 2951.540 kb on + strand, within IAI46_13890 at 2951.757 kb on + strand, within IAI46_13890
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 2,949,078 + -0.5 2,949,158 - +0.1 2,949,182 - +0.1 2,949,182 - +0.7 2,949,442 - IAI46_13880 0.41 -1.5 2,949,442 - IAI46_13880 0.41 +0.6 2,949,453 + IAI46_13880 0.43 -0.5 2,949,499 - IAI46_13880 0.50 +0.4 2,949,647 - IAI46_13880 0.72 -0.2 2,949,834 - +0.1 2,949,877 + -1.2 2,949,877 + -0.4 2,949,877 + +1.8 2,949,878 - +0.5 2,949,878 - -1.9 2,949,878 - +0.5 2,950,001 + -1.0 2,950,035 + +0.2 2,950,441 + IAI46_13885 0.51 +0.7 2,950,465 + IAI46_13885 0.54 -0.8 2,950,482 + IAI46_13885 0.56 +0.1 2,950,483 - IAI46_13885 0.56 +0.3 2,950,581 + IAI46_13885 0.67 -1.0 2,950,760 + IAI46_13885 0.87 +0.5 2,950,761 - IAI46_13885 0.87 +1.0 2,950,803 + -1.2 2,950,826 + -0.9 2,950,989 + -0.8 2,951,002 - +0.3 2,951,152 - IAI46_13890 0.11 -0.3 2,951,152 - IAI46_13890 0.11 +0.2 2,951,152 - IAI46_13890 0.11 -0.4 2,951,399 - IAI46_13890 0.21 +0.5 2,951,540 + IAI46_13890 0.27 +1.5 2,951,757 + IAI46_13890 0.36 -1.3
Or see this region's nucleotide sequence