Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_13420 and IAI46_13425 are separated by 140 nucleotides IAI46_13425 and IAI46_13430 are separated by 215 nucleotides IAI46_13430 and IAI46_13435 are separated by 146 nucleotides
IAI46_13420: IAI46_13420 - tRNA 2-thiocytidine(32) synthetase TtcA, at 2,867,860 to 2,868,792
_13420
IAI46_13425: IAI46_13425 - VOC family protein, at 2,868,933 to 2,869,331
_13425
IAI46_13430: IAI46_13430 - zinc transporter ZntB, at 2,869,547 to 2,870,530
_13430
IAI46_13435: IAI46_13435 - hypothetical protein, at 2,870,677 to 2,871,759
_13435
Position (kb)
2869
2870
2871 Strain fitness (log2 ratio)
-1
0
1
2 at 2868.630 kb on + strand, within IAI46_13420 at 2868.790 kb on + strand at 2868.790 kb on + strand at 2868.790 kb on + strand at 2868.791 kb on - strand at 2868.977 kb on + strand, within IAI46_13425 at 2869.025 kb on - strand, within IAI46_13425 at 2869.060 kb on + strand, within IAI46_13425 at 2869.066 kb on - strand, within IAI46_13425 at 2869.419 kb on + strand at 2869.523 kb on - strand at 2869.694 kb on - strand, within IAI46_13430 at 2869.729 kb on - strand, within IAI46_13430 at 2869.790 kb on - strand, within IAI46_13430 at 2869.844 kb on - strand, within IAI46_13430 at 2869.930 kb on + strand, within IAI46_13430 at 2869.930 kb on + strand, within IAI46_13430 at 2869.931 kb on - strand, within IAI46_13430 at 2869.931 kb on - strand, within IAI46_13430 at 2869.931 kb on - strand, within IAI46_13430 at 2869.931 kb on - strand, within IAI46_13430 at 2869.932 kb on + strand, within IAI46_13430 at 2869.933 kb on - strand, within IAI46_13430 at 2869.933 kb on - strand, within IAI46_13430 at 2870.082 kb on - strand, within IAI46_13430 at 2870.431 kb on + strand, within IAI46_13430 at 2870.439 kb on + strand at 2870.440 kb on - strand at 2870.454 kb on - strand at 2870.465 kb on - strand at 2870.628 kb on + strand at 2870.629 kb on - strand at 2870.630 kb on + strand at 2870.630 kb on + strand at 2870.630 kb on + strand at 2870.699 kb on + strand at 2870.847 kb on - strand, within IAI46_13435 at 2870.860 kb on - strand, within IAI46_13435 at 2870.988 kb on + strand, within IAI46_13435 at 2870.989 kb on - strand, within IAI46_13435 at 2871.206 kb on + strand, within IAI46_13435 at 2871.215 kb on - strand, within IAI46_13435 at 2871.215 kb on - strand, within IAI46_13435 at 2871.505 kb on + strand, within IAI46_13435 at 2871.505 kb on + strand, within IAI46_13435 at 2871.506 kb on - strand, within IAI46_13435 at 2871.507 kb on + strand, within IAI46_13435
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 2,868,630 + IAI46_13420 0.83 -0.2 2,868,790 + +0.1 2,868,790 + +0.2 2,868,790 + +0.4 2,868,791 - -0.5 2,868,977 + IAI46_13425 0.11 -1.0 2,869,025 - IAI46_13425 0.23 -0.6 2,869,060 + IAI46_13425 0.32 -0.6 2,869,066 - IAI46_13425 0.33 +1.0 2,869,419 + -1.4 2,869,523 - -0.1 2,869,694 - IAI46_13430 0.15 +1.3 2,869,729 - IAI46_13430 0.18 +0.8 2,869,790 - IAI46_13430 0.25 +0.2 2,869,844 - IAI46_13430 0.30 -0.3 2,869,930 + IAI46_13430 0.39 +0.3 2,869,930 + IAI46_13430 0.39 -0.1 2,869,931 - IAI46_13430 0.39 +1.5 2,869,931 - IAI46_13430 0.39 -0.7 2,869,931 - IAI46_13430 0.39 +1.2 2,869,931 - IAI46_13430 0.39 +0.0 2,869,932 + IAI46_13430 0.39 -0.0 2,869,933 - IAI46_13430 0.39 +1.2 2,869,933 - IAI46_13430 0.39 -0.1 2,870,082 - IAI46_13430 0.54 +0.6 2,870,431 + IAI46_13430 0.90 +0.6 2,870,439 + -1.3 2,870,440 - +1.1 2,870,454 - +1.1 2,870,465 - +1.7 2,870,628 + -0.1 2,870,629 - +0.9 2,870,630 + +0.2 2,870,630 + +0.7 2,870,630 + -0.0 2,870,699 + +1.5 2,870,847 - IAI46_13435 0.16 +0.1 2,870,860 - IAI46_13435 0.17 -0.7 2,870,988 + IAI46_13435 0.29 +1.1 2,870,989 - IAI46_13435 0.29 +0.9 2,871,206 + IAI46_13435 0.49 -1.1 2,871,215 - IAI46_13435 0.50 +1.5 2,871,215 - IAI46_13435 0.50 +0.5 2,871,505 + IAI46_13435 0.76 +2.0 2,871,505 + IAI46_13435 0.76 +0.7 2,871,506 - IAI46_13435 0.77 -1.1 2,871,507 + IAI46_13435 0.77 -0.3
Or see this region's nucleotide sequence