Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12265 and IAI46_12270 are separated by 27 nucleotides IAI46_12270 and IAI46_12275 are separated by 55 nucleotides IAI46_12275 and IAI46_12280 overlap by 1 nucleotides IAI46_12280 and IAI46_12285 are separated by 6 nucleotides
IAI46_12265: IAI46_12265 - amidinotransferase, at 2,602,164 to 2,602,925
_12265
IAI46_12270: IAI46_12270 - ABC transporter substrate-binding protein, at 2,602,953 to 2,603,726
_12270
IAI46_12275: IAI46_12275 - ABC transporter permease subunit, at 2,603,782 to 2,604,471
_12275
IAI46_12280: IAI46_12280 - ABC transporter permease subunit, at 2,604,471 to 2,605,193
_12280
IAI46_12285: IAI46_12285 - Lrp/AsnC family transcriptional regulator, at 2,605,200 to 2,605,655
_12285
Position (kb)
2603
2604
2605 Strain fitness (log2 ratio)
-1
0
1 at 2602.790 kb on + strand, within IAI46_12265 at 2602.790 kb on + strand, within IAI46_12265 at 2602.791 kb on - strand, within IAI46_12265 at 2603.103 kb on - strand, within IAI46_12270 at 2603.444 kb on + strand, within IAI46_12270 at 2603.477 kb on + strand, within IAI46_12270 at 2603.498 kb on + strand, within IAI46_12270 at 2603.520 kb on - strand, within IAI46_12270 at 2603.676 kb on + strand at 2603.716 kb on - strand at 2603.724 kb on + strand at 2603.767 kb on + strand at 2603.767 kb on + strand at 2603.794 kb on + strand at 2603.794 kb on + strand at 2603.973 kb on + strand, within IAI46_12275 at 2603.974 kb on - strand, within IAI46_12275 at 2604.060 kb on + strand, within IAI46_12275 at 2604.060 kb on + strand, within IAI46_12275 at 2604.060 kb on + strand, within IAI46_12275 at 2604.101 kb on - strand, within IAI46_12275 at 2604.103 kb on + strand, within IAI46_12275 at 2604.191 kb on + strand, within IAI46_12275 at 2604.383 kb on - strand, within IAI46_12275 at 2604.383 kb on - strand, within IAI46_12275 at 2604.383 kb on - strand, within IAI46_12275 at 2604.384 kb on + strand, within IAI46_12275 at 2604.384 kb on + strand, within IAI46_12275 at 2604.486 kb on - strand at 2604.586 kb on + strand, within IAI46_12280 at 2604.831 kb on + strand, within IAI46_12280 at 2604.832 kb on - strand, within IAI46_12280 at 2605.075 kb on - strand, within IAI46_12280 at 2605.113 kb on + strand, within IAI46_12280 at 2605.179 kb on - strand at 2605.180 kb on + strand at 2605.180 kb on + strand at 2605.181 kb on - strand at 2605.181 kb on - strand at 2605.181 kb on - strand at 2605.376 kb on + strand, within IAI46_12285 at 2605.380 kb on - strand, within IAI46_12285
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 2,602,790 + IAI46_12265 0.82 -0.2 2,602,790 + IAI46_12265 0.82 +0.1 2,602,791 - IAI46_12265 0.82 +0.0 2,603,103 - IAI46_12270 0.19 +0.1 2,603,444 + IAI46_12270 0.63 +0.0 2,603,477 + IAI46_12270 0.68 +0.8 2,603,498 + IAI46_12270 0.70 +1.4 2,603,520 - IAI46_12270 0.73 +0.1 2,603,676 + -0.2 2,603,716 - +0.4 2,603,724 + -0.4 2,603,767 + -0.2 2,603,767 + -0.2 2,603,794 + +0.0 2,603,794 + +1.7 2,603,973 + IAI46_12275 0.28 +0.4 2,603,974 - IAI46_12275 0.28 -0.9 2,604,060 + IAI46_12275 0.40 +0.0 2,604,060 + IAI46_12275 0.40 +0.2 2,604,060 + IAI46_12275 0.40 -1.7 2,604,101 - IAI46_12275 0.46 +0.7 2,604,103 + IAI46_12275 0.47 -0.5 2,604,191 + IAI46_12275 0.59 +0.0 2,604,383 - IAI46_12275 0.87 +0.9 2,604,383 - IAI46_12275 0.87 -1.4 2,604,383 - IAI46_12275 0.87 -0.4 2,604,384 + IAI46_12275 0.87 +0.4 2,604,384 + IAI46_12275 0.87 -0.3 2,604,486 - +0.4 2,604,586 + IAI46_12280 0.16 +1.6 2,604,831 + IAI46_12280 0.50 +0.1 2,604,832 - IAI46_12280 0.50 +0.1 2,605,075 - IAI46_12280 0.84 -0.4 2,605,113 + IAI46_12280 0.89 +0.4 2,605,179 - +0.8 2,605,180 + +1.1 2,605,180 + +0.7 2,605,181 - -0.9 2,605,181 - +0.8 2,605,181 - -1.2 2,605,376 + IAI46_12285 0.39 -0.9 2,605,380 - IAI46_12285 0.39 +0.3
Or see this region's nucleotide sequence