Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11715 and IAI46_11720 are separated by 35 nucleotides IAI46_11720 and IAI46_11725 are separated by 177 nucleotides IAI46_11725 and IAI46_11730 are separated by 97 nucleotides
IAI46_11715: IAI46_11715 - YnfA family protein, at 2,472,128 to 2,472,454
_11715
IAI46_11720: IAI46_11720 - bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG, at 2,472,490 to 2,473,239
_11720
IAI46_11725: IAI46_11725 - GNAT family N-acetyltransferase, at 2,473,417 to 2,473,938
_11725
IAI46_11730: IAI46_11730 - MFS transporter, at 2,474,036 to 2,475,478
_11730
Position (kb)
2473
2474 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2472.561 kb on + strand at 2472.638 kb on + strand, within IAI46_11720 at 2472.638 kb on + strand, within IAI46_11720 at 2472.646 kb on - strand, within IAI46_11720 at 2472.801 kb on - strand, within IAI46_11720 at 2472.983 kb on - strand, within IAI46_11720 at 2472.983 kb on - strand, within IAI46_11720 at 2473.010 kb on - strand, within IAI46_11720 at 2473.076 kb on - strand, within IAI46_11720 at 2473.076 kb on - strand, within IAI46_11720 at 2473.141 kb on - strand, within IAI46_11720 at 2473.273 kb on + strand at 2473.277 kb on - strand at 2473.277 kb on - strand at 2473.277 kb on - strand at 2473.283 kb on - strand at 2473.287 kb on + strand at 2473.414 kb on + strand at 2473.415 kb on - strand at 2473.415 kb on - strand at 2473.419 kb on - strand at 2473.419 kb on - strand at 2473.440 kb on - strand at 2473.440 kb on - strand at 2473.454 kb on + strand at 2473.546 kb on - strand, within IAI46_11725 at 2473.645 kb on - strand, within IAI46_11725 at 2473.833 kb on + strand, within IAI46_11725 at 2473.875 kb on + strand, within IAI46_11725 at 2473.939 kb on + strand at 2473.940 kb on - strand at 2473.940 kb on - strand at 2473.943 kb on - strand at 2473.946 kb on - strand at 2473.946 kb on - strand at 2474.012 kb on - strand at 2474.012 kb on - strand at 2474.305 kb on + strand, within IAI46_11730 at 2474.306 kb on - strand, within IAI46_11730 at 2474.495 kb on - strand, within IAI46_11730
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 2,472,561 + +0.1 2,472,638 + IAI46_11720 0.20 -0.4 2,472,638 + IAI46_11720 0.20 -0.5 2,472,646 - IAI46_11720 0.21 +1.3 2,472,801 - IAI46_11720 0.41 +1.5 2,472,983 - IAI46_11720 0.66 +0.9 2,472,983 - IAI46_11720 0.66 -0.5 2,473,010 - IAI46_11720 0.69 -2.2 2,473,076 - IAI46_11720 0.78 +0.9 2,473,076 - IAI46_11720 0.78 +0.7 2,473,141 - IAI46_11720 0.87 -0.2 2,473,273 + +2.2 2,473,277 - -0.3 2,473,277 - +1.5 2,473,277 - -0.9 2,473,283 - +0.3 2,473,287 + -1.3 2,473,414 + +1.0 2,473,415 - +1.7 2,473,415 - -0.3 2,473,419 - +0.7 2,473,419 - +1.5 2,473,440 - -1.9 2,473,440 - -0.7 2,473,454 + +0.3 2,473,546 - IAI46_11725 0.25 +0.1 2,473,645 - IAI46_11725 0.44 -0.5 2,473,833 + IAI46_11725 0.80 +0.2 2,473,875 + IAI46_11725 0.88 -0.4 2,473,939 + +0.8 2,473,940 - -0.0 2,473,940 - +0.5 2,473,943 - -0.5 2,473,946 - -1.7 2,473,946 - -1.2 2,474,012 - -0.1 2,474,012 - +0.5 2,474,305 + IAI46_11730 0.19 +1.7 2,474,306 - IAI46_11730 0.19 -1.8 2,474,495 - IAI46_11730 0.32 +0.9
Or see this region's nucleotide sequence