Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11315 and IAI46_11320 are separated by 240 nucleotides IAI46_11320 and IAI46_11325 are separated by 6 nucleotides
IAI46_11315: IAI46_11315 - polyurethanase, at 2,386,619 to 2,388,466
_11315
IAI46_11320: IAI46_11320 - superoxide dismutase family protein, at 2,388,707 to 2,389,231
_11320
IAI46_11325: IAI46_11325 - FUSC family protein, at 2,389,238 to 2,391,271
_11325
Position (kb)
2388
2389
2390 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2387.720 kb on - strand, within IAI46_11315 at 2387.749 kb on + strand, within IAI46_11315 at 2387.770 kb on - strand, within IAI46_11315 at 2387.864 kb on - strand, within IAI46_11315 at 2387.864 kb on - strand, within IAI46_11315 at 2387.947 kb on + strand, within IAI46_11315 at 2387.948 kb on - strand, within IAI46_11315 at 2387.955 kb on + strand, within IAI46_11315 at 2388.119 kb on - strand, within IAI46_11315 at 2388.139 kb on - strand, within IAI46_11315 at 2388.176 kb on + strand, within IAI46_11315 at 2388.190 kb on + strand, within IAI46_11315 at 2388.387 kb on + strand at 2388.392 kb on - strand at 2388.416 kb on + strand at 2388.450 kb on + strand at 2388.450 kb on + strand at 2388.507 kb on - strand at 2388.513 kb on - strand at 2388.513 kb on - strand at 2388.513 kb on - strand at 2388.516 kb on + strand at 2388.517 kb on - strand at 2388.517 kb on - strand at 2388.517 kb on - strand at 2388.517 kb on - strand at 2388.517 kb on - strand at 2388.592 kb on + strand at 2388.599 kb on - strand at 2388.599 kb on - strand at 2388.669 kb on - strand at 2388.670 kb on + strand at 2389.019 kb on + strand, within IAI46_11320 at 2389.055 kb on + strand, within IAI46_11320 at 2389.055 kb on + strand, within IAI46_11320 at 2389.056 kb on - strand, within IAI46_11320 at 2389.056 kb on - strand, within IAI46_11320 at 2389.268 kb on - strand at 2389.463 kb on - strand, within IAI46_11325 at 2389.620 kb on + strand, within IAI46_11325 at 2389.620 kb on + strand, within IAI46_11325 at 2389.621 kb on - strand, within IAI46_11325 at 2389.742 kb on + strand, within IAI46_11325 at 2389.812 kb on + strand, within IAI46_11325 at 2389.818 kb on + strand, within IAI46_11325 at 2390.073 kb on + strand, within IAI46_11325 at 2390.073 kb on + strand, within IAI46_11325 at 2390.186 kb on - strand, within IAI46_11325 at 2390.188 kb on - strand, within IAI46_11325 at 2390.199 kb on + strand, within IAI46_11325
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 2,387,720 - IAI46_11315 0.60 -1.1 2,387,749 + IAI46_11315 0.61 -0.5 2,387,770 - IAI46_11315 0.62 +0.2 2,387,864 - IAI46_11315 0.67 +0.5 2,387,864 - IAI46_11315 0.67 +0.9 2,387,947 + IAI46_11315 0.72 -0.1 2,387,948 - IAI46_11315 0.72 +0.5 2,387,955 + IAI46_11315 0.72 -0.7 2,388,119 - IAI46_11315 0.81 +2.1 2,388,139 - IAI46_11315 0.82 +1.1 2,388,176 + IAI46_11315 0.84 -0.2 2,388,190 + IAI46_11315 0.85 -0.8 2,388,387 + +0.0 2,388,392 - -0.1 2,388,416 + -2.2 2,388,450 + +0.4 2,388,450 + +0.3 2,388,507 - +0.7 2,388,513 - +0.7 2,388,513 - -0.8 2,388,513 - +0.3 2,388,516 + -0.4 2,388,517 - -0.4 2,388,517 - +0.5 2,388,517 - +0.7 2,388,517 - +0.3 2,388,517 - -0.5 2,388,592 + -1.1 2,388,599 - +0.5 2,388,599 - -0.7 2,388,669 - -0.4 2,388,670 + +1.2 2,389,019 + IAI46_11320 0.59 -1.1 2,389,055 + IAI46_11320 0.66 +0.9 2,389,055 + IAI46_11320 0.66 +0.9 2,389,056 - IAI46_11320 0.66 +0.8 2,389,056 - IAI46_11320 0.66 +1.8 2,389,268 - -0.8 2,389,463 - IAI46_11325 0.11 +0.2 2,389,620 + IAI46_11325 0.19 +0.3 2,389,620 + IAI46_11325 0.19 +0.5 2,389,621 - IAI46_11325 0.19 +0.1 2,389,742 + IAI46_11325 0.25 -0.4 2,389,812 + IAI46_11325 0.28 +0.5 2,389,818 + IAI46_11325 0.29 +0.3 2,390,073 + IAI46_11325 0.41 +0.2 2,390,073 + IAI46_11325 0.41 -0.2 2,390,186 - IAI46_11325 0.47 -1.1 2,390,188 - IAI46_11325 0.47 -0.1 2,390,199 + IAI46_11325 0.47 +0.2
Or see this region's nucleotide sequence