Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11230 and IAI46_11235 are separated by 123 nucleotides IAI46_11235 and IAI46_11240 are separated by 41 nucleotides
IAI46_11230: IAI46_11230 - Bcr/CflA family multidrug efflux MFS transporter, at 2,371,578 to 2,372,789
_11230
IAI46_11235: IAI46_11235 - LysR family transcriptional regulator, at 2,372,913 to 2,373,821
_11235
IAI46_11240: IAI46_11240 - HTH-type transcriptional repressor PurR, at 2,373,863 to 2,374,888
_11240
Position (kb)
2372
2373
2374 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2371.926 kb on + strand, within IAI46_11230 at 2371.926 kb on + strand, within IAI46_11230 at 2371.938 kb on - strand, within IAI46_11230 at 2372.014 kb on + strand, within IAI46_11230 at 2372.015 kb on - strand, within IAI46_11230 at 2372.025 kb on + strand, within IAI46_11230 at 2372.026 kb on - strand, within IAI46_11230 at 2372.026 kb on - strand, within IAI46_11230 at 2372.026 kb on - strand, within IAI46_11230 at 2372.026 kb on - strand, within IAI46_11230 at 2372.051 kb on - strand, within IAI46_11230 at 2372.051 kb on - strand, within IAI46_11230 at 2372.077 kb on + strand, within IAI46_11230 at 2372.154 kb on - strand, within IAI46_11230 at 2372.154 kb on - strand, within IAI46_11230 at 2372.384 kb on + strand, within IAI46_11230 at 2372.385 kb on - strand, within IAI46_11230 at 2372.716 kb on + strand at 2372.720 kb on + strand at 2372.721 kb on - strand at 2372.761 kb on + strand at 2372.761 kb on + strand at 2372.762 kb on - strand at 2372.769 kb on - strand at 2372.811 kb on - strand at 2372.913 kb on - strand at 2372.925 kb on + strand at 2372.925 kb on + strand at 2373.512 kb on + strand, within IAI46_11235 at 2373.512 kb on + strand, within IAI46_11235 at 2373.513 kb on - strand, within IAI46_11235 at 2373.627 kb on - strand, within IAI46_11235 at 2373.646 kb on + strand, within IAI46_11235 at 2373.647 kb on - strand, within IAI46_11235 at 2373.861 kb on - strand at 2373.861 kb on - strand at 2374.040 kb on - strand, within IAI46_11240 at 2374.083 kb on - strand, within IAI46_11240 at 2374.083 kb on - strand, within IAI46_11240 at 2374.426 kb on + strand, within IAI46_11240 at 2374.530 kb on - strand, within IAI46_11240 at 2374.569 kb on + strand, within IAI46_11240 at 2374.619 kb on - strand, within IAI46_11240 at 2374.619 kb on - strand, within IAI46_11240
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 2,371,926 + IAI46_11230 0.29 -1.8 2,371,926 + IAI46_11230 0.29 -0.1 2,371,938 - IAI46_11230 0.30 -0.7 2,372,014 + IAI46_11230 0.36 +0.5 2,372,015 - IAI46_11230 0.36 -0.7 2,372,025 + IAI46_11230 0.37 -0.6 2,372,026 - IAI46_11230 0.37 -0.5 2,372,026 - IAI46_11230 0.37 -0.2 2,372,026 - IAI46_11230 0.37 +0.2 2,372,026 - IAI46_11230 0.37 +0.5 2,372,051 - IAI46_11230 0.39 +0.4 2,372,051 - IAI46_11230 0.39 +0.5 2,372,077 + IAI46_11230 0.41 -1.4 2,372,154 - IAI46_11230 0.48 +0.7 2,372,154 - IAI46_11230 0.48 +2.0 2,372,384 + IAI46_11230 0.67 +1.1 2,372,385 - IAI46_11230 0.67 +0.4 2,372,716 + +0.3 2,372,720 + -1.4 2,372,721 - +0.1 2,372,761 + +0.9 2,372,761 + +0.3 2,372,762 - -0.1 2,372,769 - +0.6 2,372,811 - +0.1 2,372,913 - +0.5 2,372,925 + +0.5 2,372,925 + -0.4 2,373,512 + IAI46_11235 0.66 -0.5 2,373,512 + IAI46_11235 0.66 -0.1 2,373,513 - IAI46_11235 0.66 +1.7 2,373,627 - IAI46_11235 0.79 +1.5 2,373,646 + IAI46_11235 0.81 +1.1 2,373,647 - IAI46_11235 0.81 +0.3 2,373,861 - -0.5 2,373,861 - +0.6 2,374,040 - IAI46_11240 0.17 +0.9 2,374,083 - IAI46_11240 0.21 -0.1 2,374,083 - IAI46_11240 0.21 +0.5 2,374,426 + IAI46_11240 0.55 -1.3 2,374,530 - IAI46_11240 0.65 -1.1 2,374,569 + IAI46_11240 0.69 -0.2 2,374,619 - IAI46_11240 0.74 -0.5 2,374,619 - IAI46_11240 0.74 -0.5
Or see this region's nucleotide sequence