Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09720 and IAI46_09725 are separated by 143 nucleotides IAI46_09725 and IAI46_09730 are separated by 199 nucleotides IAI46_09730 and IAI46_09735 are separated by 136 nucleotides IAI46_09735 and IAI46_09740 are separated by 80 nucleotides
IAI46_09720: IAI46_09720 - N-methyl-L-tryptophan oxidase, at 2,060,308 to 2,061,423
_09720
IAI46_09725: IAI46_09725 - biofilm formation regulator BssS, at 2,061,567 to 2,061,821
_09725
IAI46_09730: IAI46_09730 - hypothetical protein, at 2,062,021 to 2,062,299
_09730
IAI46_09735: IAI46_09735 - DNA damage-inducible protein I, at 2,062,436 to 2,062,675
_09735
IAI46_09740: IAI46_09740 - dihydroorotase, at 2,062,756 to 2,063,802
_09740
Position (kb)
2061
2062 Strain fitness (log2 ratio)
-2
-1
0
1 at 2060.684 kb on + strand, within IAI46_09720 at 2060.684 kb on + strand, within IAI46_09720 at 2060.685 kb on - strand, within IAI46_09720 at 2060.735 kb on - strand, within IAI46_09720 at 2060.771 kb on - strand, within IAI46_09720 at 2061.263 kb on + strand, within IAI46_09720 at 2061.331 kb on + strand at 2061.337 kb on + strand at 2061.338 kb on - strand at 2061.366 kb on - strand at 2061.368 kb on + strand at 2061.409 kb on + strand at 2061.409 kb on + strand at 2061.410 kb on - strand at 2061.417 kb on - strand at 2061.430 kb on + strand at 2061.443 kb on - strand at 2061.467 kb on - strand at 2061.568 kb on + strand at 2061.569 kb on - strand at 2061.685 kb on - strand, within IAI46_09725 at 2061.685 kb on - strand, within IAI46_09725 at 2061.725 kb on - strand, within IAI46_09725 at 2061.735 kb on + strand, within IAI46_09725 at 2061.736 kb on - strand, within IAI46_09725 at 2061.751 kb on + strand, within IAI46_09725 at 2061.765 kb on - strand, within IAI46_09725 at 2061.770 kb on + strand, within IAI46_09725 at 2061.801 kb on + strand at 2061.839 kb on + strand at 2061.842 kb on + strand at 2061.842 kb on + strand at 2061.843 kb on - strand at 2061.843 kb on - strand at 2061.846 kb on + strand at 2061.846 kb on + strand at 2061.847 kb on - strand at 2061.897 kb on + strand at 2061.898 kb on - strand at 2061.898 kb on - strand at 2061.902 kb on + strand at 2061.903 kb on - strand at 2061.905 kb on - strand at 2061.996 kb on + strand at 2061.997 kb on - strand at 2062.000 kb on + strand at 2062.000 kb on + strand at 2062.000 kb on + strand at 2062.000 kb on + strand at 2062.029 kb on + strand at 2062.153 kb on + strand, within IAI46_09730 at 2062.153 kb on + strand, within IAI46_09730 at 2062.153 kb on + strand, within IAI46_09730 at 2062.210 kb on + strand, within IAI46_09730 at 2062.340 kb on - strand at 2062.434 kb on + strand at 2062.434 kb on + strand at 2062.434 kb on + strand at 2062.504 kb on + strand, within IAI46_09735 at 2062.552 kb on - strand, within IAI46_09735 at 2062.651 kb on + strand, within IAI46_09735 at 2062.651 kb on + strand, within IAI46_09735 at 2062.652 kb on - strand at 2062.655 kb on + strand at 2062.656 kb on - strand at 2062.676 kb on - strand at 2062.676 kb on - strand at 2062.676 kb on - strand at 2062.734 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 2,060,684 + IAI46_09720 0.34 +0.3 2,060,684 + IAI46_09720 0.34 -0.7 2,060,685 - IAI46_09720 0.34 -1.6 2,060,735 - IAI46_09720 0.38 +0.8 2,060,771 - IAI46_09720 0.41 +0.3 2,061,263 + IAI46_09720 0.86 +0.6 2,061,331 + -0.6 2,061,337 + -1.7 2,061,338 - +0.4 2,061,366 - -0.2 2,061,368 + -2.1 2,061,409 + -0.2 2,061,409 + +0.4 2,061,410 - -0.0 2,061,417 - -0.4 2,061,430 + +0.7 2,061,443 - +1.1 2,061,467 - -1.2 2,061,568 + -0.1 2,061,569 - -0.0 2,061,685 - IAI46_09725 0.46 +0.2 2,061,685 - IAI46_09725 0.46 -0.2 2,061,725 - IAI46_09725 0.62 +0.4 2,061,735 + IAI46_09725 0.66 -0.8 2,061,736 - IAI46_09725 0.66 +0.9 2,061,751 + IAI46_09725 0.72 -0.0 2,061,765 - IAI46_09725 0.78 -0.1 2,061,770 + IAI46_09725 0.80 -0.0 2,061,801 + +0.8 2,061,839 + -0.0 2,061,842 + -0.4 2,061,842 + -0.7 2,061,843 - -0.4 2,061,843 - +0.8 2,061,846 + +0.6 2,061,846 + -1.1 2,061,847 - -0.1 2,061,897 + -0.5 2,061,898 - -1.6 2,061,898 - +0.3 2,061,902 + -1.0 2,061,903 - -0.0 2,061,905 - -0.3 2,061,996 + -1.0 2,061,997 - +0.8 2,062,000 + -0.7 2,062,000 + -0.0 2,062,000 + -0.2 2,062,000 + +1.4 2,062,029 + +0.8 2,062,153 + IAI46_09730 0.47 -0.6 2,062,153 + IAI46_09730 0.47 -0.5 2,062,153 + IAI46_09730 0.47 -2.0 2,062,210 + IAI46_09730 0.68 -0.2 2,062,340 - -0.1 2,062,434 + -2.6 2,062,434 + +0.1 2,062,434 + -1.0 2,062,504 + IAI46_09735 0.28 +0.1 2,062,552 - IAI46_09735 0.48 -0.2 2,062,651 + IAI46_09735 0.90 +0.3 2,062,651 + IAI46_09735 0.90 +1.3 2,062,652 - +0.8 2,062,655 + +0.1 2,062,656 - +0.4 2,062,676 - -0.1 2,062,676 - -1.0 2,062,676 - -0.3 2,062,734 - -0.6
Or see this region's nucleotide sequence