Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09700 and IAI46_09705 overlap by 14 nucleotides IAI46_09705 and IAI46_09710 are separated by 4 nucleotides IAI46_09710 and IAI46_09715 are separated by 133 nucleotides
IAI46_09700: IAI46_09700 - AI-2E family transporter, at 2,057,185 to 2,058,237
_09700
IAI46_09705: IAI46_09705 - zinc-dependent alcohol dehydrogenase family protein, at 2,058,224 to 2,059,201
_09705
IAI46_09710: IAI46_09710 - DUF2770 family protein, at 2,059,206 to 2,059,322
_09710
IAI46_09715: IAI46_09715 - helix-turn-helix transcriptional regulator, at 2,059,456 to 2,060,082
_09715
Position (kb)
2058
2059
2060 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2057.251 kb on - strand at 2057.316 kb on + strand, within IAI46_09700 at 2057.317 kb on - strand, within IAI46_09700 at 2057.345 kb on + strand, within IAI46_09700 at 2057.346 kb on - strand, within IAI46_09700 at 2057.358 kb on + strand, within IAI46_09700 at 2057.361 kb on - strand, within IAI46_09700 at 2057.384 kb on + strand, within IAI46_09700 at 2057.429 kb on + strand, within IAI46_09700 at 2057.540 kb on + strand, within IAI46_09700 at 2057.563 kb on + strand, within IAI46_09700 at 2057.563 kb on + strand, within IAI46_09700 at 2057.564 kb on - strand, within IAI46_09700 at 2057.660 kb on + strand, within IAI46_09700 at 2057.664 kb on + strand, within IAI46_09700 at 2057.664 kb on + strand, within IAI46_09700 at 2057.664 kb on + strand, within IAI46_09700 at 2057.715 kb on + strand, within IAI46_09700 at 2057.739 kb on + strand, within IAI46_09700 at 2057.770 kb on + strand, within IAI46_09700 at 2057.770 kb on + strand, within IAI46_09700 at 2058.015 kb on + strand, within IAI46_09700 at 2058.119 kb on + strand, within IAI46_09700 at 2058.119 kb on + strand, within IAI46_09700 at 2058.119 kb on + strand, within IAI46_09700 at 2058.119 kb on + strand, within IAI46_09700 at 2058.119 kb on + strand, within IAI46_09700 at 2058.141 kb on + strand at 2058.141 kb on + strand at 2058.142 kb on - strand at 2058.181 kb on - strand at 2058.181 kb on - strand at 2058.290 kb on - strand at 2058.290 kb on - strand at 2058.307 kb on - strand at 2058.311 kb on - strand at 2058.457 kb on + strand, within IAI46_09705 at 2058.457 kb on + strand, within IAI46_09705 at 2058.458 kb on - strand, within IAI46_09705 at 2058.620 kb on + strand, within IAI46_09705 at 2058.621 kb on - strand, within IAI46_09705 at 2058.621 kb on - strand, within IAI46_09705 at 2058.632 kb on + strand, within IAI46_09705 at 2058.682 kb on + strand, within IAI46_09705 at 2058.809 kb on + strand, within IAI46_09705 at 2058.813 kb on - strand, within IAI46_09705 at 2058.833 kb on - strand, within IAI46_09705 at 2058.838 kb on - strand, within IAI46_09705 at 2059.024 kb on + strand, within IAI46_09705 at 2059.035 kb on + strand, within IAI46_09705 at 2059.035 kb on + strand, within IAI46_09705 at 2059.044 kb on + strand, within IAI46_09705 at 2059.044 kb on + strand, within IAI46_09705 at 2059.045 kb on - strand, within IAI46_09705 at 2059.081 kb on - strand, within IAI46_09705 at 2059.262 kb on + strand, within IAI46_09710 at 2059.263 kb on - strand, within IAI46_09710 at 2059.265 kb on - strand, within IAI46_09710 at 2059.308 kb on + strand, within IAI46_09710 at 2059.340 kb on + strand at 2059.356 kb on - strand at 2059.379 kb on - strand at 2059.381 kb on + strand at 2059.458 kb on - strand at 2059.460 kb on - strand at 2059.460 kb on - strand at 2059.482 kb on + strand at 2059.483 kb on - strand at 2059.528 kb on - strand, within IAI46_09715 at 2059.530 kb on - strand, within IAI46_09715 at 2059.555 kb on - strand, within IAI46_09715 at 2059.595 kb on + strand, within IAI46_09715 at 2059.637 kb on + strand, within IAI46_09715 at 2059.845 kb on + strand, within IAI46_09715 at 2059.846 kb on - strand, within IAI46_09715 at 2059.846 kb on - strand, within IAI46_09715 at 2059.876 kb on - strand, within IAI46_09715 at 2059.999 kb on + strand, within IAI46_09715 at 2060.120 kb on + strand at 2060.142 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 2,057,251 - -1.4 2,057,316 + IAI46_09700 0.12 -0.7 2,057,317 - IAI46_09700 0.13 +0.3 2,057,345 + IAI46_09700 0.15 +0.1 2,057,346 - IAI46_09700 0.15 +0.9 2,057,358 + IAI46_09700 0.16 +1.0 2,057,361 - IAI46_09700 0.17 -1.6 2,057,384 + IAI46_09700 0.19 -0.2 2,057,429 + IAI46_09700 0.23 -0.4 2,057,540 + IAI46_09700 0.34 +1.4 2,057,563 + IAI46_09700 0.36 +0.1 2,057,563 + IAI46_09700 0.36 -0.8 2,057,564 - IAI46_09700 0.36 -0.0 2,057,660 + IAI46_09700 0.45 -0.3 2,057,664 + IAI46_09700 0.45 -0.0 2,057,664 + IAI46_09700 0.45 +0.1 2,057,664 + IAI46_09700 0.45 -0.3 2,057,715 + IAI46_09700 0.50 -0.4 2,057,739 + IAI46_09700 0.53 -0.4 2,057,770 + IAI46_09700 0.56 +0.9 2,057,770 + IAI46_09700 0.56 -1.4 2,058,015 + IAI46_09700 0.79 -0.2 2,058,119 + IAI46_09700 0.89 -0.7 2,058,119 + IAI46_09700 0.89 -0.6 2,058,119 + IAI46_09700 0.89 +1.2 2,058,119 + IAI46_09700 0.89 -0.5 2,058,119 + IAI46_09700 0.89 -0.3 2,058,141 + -0.8 2,058,141 + +1.0 2,058,142 - -0.0 2,058,181 - -0.4 2,058,181 - +0.1 2,058,290 - -0.4 2,058,290 - -0.2 2,058,307 - -1.4 2,058,311 - +0.5 2,058,457 + IAI46_09705 0.24 -0.5 2,058,457 + IAI46_09705 0.24 -1.7 2,058,458 - IAI46_09705 0.24 -0.7 2,058,620 + IAI46_09705 0.40 -2.6 2,058,621 - IAI46_09705 0.41 -1.6 2,058,621 - IAI46_09705 0.41 +0.7 2,058,632 + IAI46_09705 0.42 -1.3 2,058,682 + IAI46_09705 0.47 -0.2 2,058,809 + IAI46_09705 0.60 +0.6 2,058,813 - IAI46_09705 0.60 -0.6 2,058,833 - IAI46_09705 0.62 -0.0 2,058,838 - IAI46_09705 0.63 +1.2 2,059,024 + IAI46_09705 0.82 -1.5 2,059,035 + IAI46_09705 0.83 +0.1 2,059,035 + IAI46_09705 0.83 +1.0 2,059,044 + IAI46_09705 0.84 +0.4 2,059,044 + IAI46_09705 0.84 +1.2 2,059,045 - IAI46_09705 0.84 -0.3 2,059,081 - IAI46_09705 0.88 -1.1 2,059,262 + IAI46_09710 0.48 +0.1 2,059,263 - IAI46_09710 0.49 -0.5 2,059,265 - IAI46_09710 0.50 +1.0 2,059,308 + IAI46_09710 0.87 -0.4 2,059,340 + +0.6 2,059,356 - -0.7 2,059,379 - +1.0 2,059,381 + +2.3 2,059,458 - +0.3 2,059,460 - +0.8 2,059,460 - -0.3 2,059,482 + -1.3 2,059,483 - +1.7 2,059,528 - IAI46_09715 0.11 +0.4 2,059,530 - IAI46_09715 0.12 +0.8 2,059,555 - IAI46_09715 0.16 +1.3 2,059,595 + IAI46_09715 0.22 -0.0 2,059,637 + IAI46_09715 0.29 +1.6 2,059,845 + IAI46_09715 0.62 -1.3 2,059,846 - IAI46_09715 0.62 -0.8 2,059,846 - IAI46_09715 0.62 +0.5 2,059,876 - IAI46_09715 0.67 +0.8 2,059,999 + IAI46_09715 0.87 +0.6 2,060,120 + -0.0 2,060,142 - +1.0
Or see this region's nucleotide sequence