Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_08465 and IAI46_08470 are separated by 180 nucleotides IAI46_08470 and IAI46_08475 are separated by 51 nucleotides
IAI46_08465: IAI46_08465 - ubiquinone-dependent pyruvate dehydrogenase, at 1,799,270 to 1,800,991
_08465
IAI46_08470: IAI46_08470 - NADH oxidoreductase, at 1,801,172 to 1,802,176
_08470
IAI46_08475: IAI46_08475 - hydroxylamine reductase, at 1,802,228 to 1,803,877
_08475
Position (kb)
1801
1802
1803 Strain fitness (log2 ratio)
-1
0
1 at 1800.253 kb on + strand, within IAI46_08465 at 1800.254 kb on - strand, within IAI46_08465 at 1800.255 kb on + strand, within IAI46_08465 at 1800.274 kb on + strand, within IAI46_08465 at 1800.383 kb on - strand, within IAI46_08465 at 1800.397 kb on + strand, within IAI46_08465 at 1800.660 kb on + strand, within IAI46_08465 at 1800.689 kb on - strand, within IAI46_08465 at 1800.713 kb on + strand, within IAI46_08465 at 1800.714 kb on - strand, within IAI46_08465 at 1800.905 kb on - strand at 1800.991 kb on + strand at 1800.991 kb on + strand at 1801.016 kb on - strand at 1801.056 kb on + strand at 1801.057 kb on - strand at 1801.063 kb on + strand at 1801.080 kb on + strand at 1801.108 kb on - strand at 1801.273 kb on - strand, within IAI46_08470 at 1801.393 kb on - strand, within IAI46_08470 at 1801.463 kb on - strand, within IAI46_08470 at 1801.534 kb on + strand, within IAI46_08470 at 1801.534 kb on + strand, within IAI46_08470 at 1801.534 kb on + strand, within IAI46_08470 at 1801.535 kb on - strand, within IAI46_08470 at 1801.535 kb on - strand, within IAI46_08470 at 1801.536 kb on + strand, within IAI46_08470 at 1801.536 kb on + strand, within IAI46_08470 at 1801.536 kb on + strand, within IAI46_08470 at 1801.536 kb on + strand, within IAI46_08470 at 1801.537 kb on - strand, within IAI46_08470 at 1801.627 kb on - strand, within IAI46_08470 at 1801.733 kb on + strand, within IAI46_08470 at 1801.733 kb on + strand, within IAI46_08470 at 1801.733 kb on + strand, within IAI46_08470 at 1801.734 kb on - strand, within IAI46_08470 at 1801.734 kb on - strand, within IAI46_08470 at 1801.836 kb on + strand, within IAI46_08470 at 1801.958 kb on + strand, within IAI46_08470 at 1802.005 kb on + strand, within IAI46_08470 at 1802.006 kb on - strand, within IAI46_08470 at 1802.007 kb on + strand, within IAI46_08470 at 1802.073 kb on + strand, within IAI46_08470 at 1802.177 kb on - strand at 1802.177 kb on - strand at 1802.266 kb on + strand at 1802.446 kb on + strand, within IAI46_08475 at 1802.638 kb on - strand, within IAI46_08475 at 1802.924 kb on - strand, within IAI46_08475 at 1802.947 kb on + strand, within IAI46_08475 at 1802.947 kb on + strand, within IAI46_08475 at 1803.000 kb on + strand, within IAI46_08475 at 1803.072 kb on + strand, within IAI46_08475 at 1803.072 kb on + strand, within IAI46_08475 at 1803.073 kb on - strand, within IAI46_08475
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 1,800,253 + IAI46_08465 0.57 +0.2 1,800,254 - IAI46_08465 0.57 +1.2 1,800,255 + IAI46_08465 0.57 -0.8 1,800,274 + IAI46_08465 0.58 +0.4 1,800,383 - IAI46_08465 0.65 +0.2 1,800,397 + IAI46_08465 0.65 +0.1 1,800,660 + IAI46_08465 0.81 +0.8 1,800,689 - IAI46_08465 0.82 -0.2 1,800,713 + IAI46_08465 0.84 +0.3 1,800,714 - IAI46_08465 0.84 -0.1 1,800,905 - -0.2 1,800,991 + -0.5 1,800,991 + +0.8 1,801,016 - -0.5 1,801,056 + +0.9 1,801,057 - +1.3 1,801,063 + +0.1 1,801,080 + -0.4 1,801,108 - -0.1 1,801,273 - IAI46_08470 0.10 -0.2 1,801,393 - IAI46_08470 0.22 +0.7 1,801,463 - IAI46_08470 0.29 -0.2 1,801,534 + IAI46_08470 0.36 +0.8 1,801,534 + IAI46_08470 0.36 +0.4 1,801,534 + IAI46_08470 0.36 -0.3 1,801,535 - IAI46_08470 0.36 +0.6 1,801,535 - IAI46_08470 0.36 +0.8 1,801,536 + IAI46_08470 0.36 +0.0 1,801,536 + IAI46_08470 0.36 -0.6 1,801,536 + IAI46_08470 0.36 +0.1 1,801,536 + IAI46_08470 0.36 +0.4 1,801,537 - IAI46_08470 0.36 -0.2 1,801,627 - IAI46_08470 0.45 -0.4 1,801,733 + IAI46_08470 0.56 -0.7 1,801,733 + IAI46_08470 0.56 +0.5 1,801,733 + IAI46_08470 0.56 -0.2 1,801,734 - IAI46_08470 0.56 +0.8 1,801,734 - IAI46_08470 0.56 +1.0 1,801,836 + IAI46_08470 0.66 -0.4 1,801,958 + IAI46_08470 0.78 +0.3 1,802,005 + IAI46_08470 0.83 -0.2 1,802,006 - IAI46_08470 0.83 -0.7 1,802,007 + IAI46_08470 0.83 -0.9 1,802,073 + IAI46_08470 0.90 +0.3 1,802,177 - +0.0 1,802,177 - +1.3 1,802,266 + +0.4 1,802,446 + IAI46_08475 0.13 +0.8 1,802,638 - IAI46_08475 0.25 -0.4 1,802,924 - IAI46_08475 0.42 +0.7 1,802,947 + IAI46_08475 0.44 +0.2 1,802,947 + IAI46_08475 0.44 +0.2 1,803,000 + IAI46_08475 0.47 -0.2 1,803,072 + IAI46_08475 0.51 +0.3 1,803,072 + IAI46_08475 0.51 -0.5 1,803,073 - IAI46_08475 0.51 +1.5
Or see this region's nucleotide sequence