Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_06905 and IAI46_06910 are separated by 5 nucleotides IAI46_06910 and IAI46_06915 are separated by 208 nucleotides IAI46_06915 and IAI46_06920 are separated by 119 nucleotides IAI46_06920 and IAI46_06925 overlap by 4 nucleotides
IAI46_06905: IAI46_06905 - sulfite reductase flavoprotein subunit alpha, at 1,463,006 to 1,464,547
_06905
IAI46_06910: IAI46_06910 - PAS sensor domain-containing protein, at 1,464,553 to 1,464,978
_06910
IAI46_06915: IAI46_06915 - D-lactate dehydrogenase, at 1,465,187 to 1,466,905
_06915
IAI46_06920: IAI46_06920 - type I methionyl aminopeptidase, at 1,467,025 to 1,467,819
_06920
IAI46_06925: IAI46_06925 - ParD-like family protein, at 1,467,816 to 1,468,019
_06925
Position (kb)
1465
1466
1467 Strain fitness (log2 ratio)
-2
-1
0
1 at 1464.372 kb on - strand, within IAI46_06905 at 1464.383 kb on + strand, within IAI46_06905 at 1464.384 kb on - strand, within IAI46_06905 at 1464.431 kb on + strand at 1464.461 kb on + strand at 1464.478 kb on + strand at 1464.513 kb on + strand at 1464.526 kb on + strand at 1464.527 kb on - strand at 1464.555 kb on - strand at 1464.558 kb on + strand at 1464.558 kb on + strand at 1464.559 kb on - strand at 1464.563 kb on + strand at 1464.648 kb on - strand, within IAI46_06910 at 1464.648 kb on - strand, within IAI46_06910 at 1464.674 kb on + strand, within IAI46_06910 at 1464.704 kb on + strand, within IAI46_06910 at 1464.704 kb on + strand, within IAI46_06910 at 1464.705 kb on - strand, within IAI46_06910 at 1464.705 kb on - strand, within IAI46_06910 at 1464.763 kb on - strand, within IAI46_06910 at 1464.763 kb on - strand, within IAI46_06910 at 1464.768 kb on + strand, within IAI46_06910 at 1464.784 kb on - strand, within IAI46_06910 at 1464.786 kb on - strand, within IAI46_06910 at 1464.887 kb on + strand, within IAI46_06910 at 1464.887 kb on + strand, within IAI46_06910 at 1464.887 kb on + strand, within IAI46_06910 at 1464.887 kb on + strand, within IAI46_06910 at 1464.887 kb on + strand, within IAI46_06910 at 1464.888 kb on - strand, within IAI46_06910 at 1464.888 kb on - strand, within IAI46_06910 at 1464.888 kb on - strand, within IAI46_06910 at 1464.981 kb on + strand at 1465.030 kb on + strand at 1465.031 kb on - strand at 1465.077 kb on + strand at 1465.078 kb on - strand at 1465.272 kb on + strand at 1465.302 kb on + strand at 1465.302 kb on + strand at 1465.302 kb on + strand at 1465.302 kb on + strand at 1465.318 kb on + strand at 1465.319 kb on - strand at 1465.410 kb on + strand, within IAI46_06915 at 1465.411 kb on - strand, within IAI46_06915 at 1465.435 kb on + strand, within IAI46_06915 at 1465.435 kb on + strand, within IAI46_06915 at 1465.436 kb on - strand, within IAI46_06915 at 1465.436 kb on - strand, within IAI46_06915 at 1465.436 kb on - strand, within IAI46_06915 at 1465.446 kb on + strand, within IAI46_06915 at 1465.446 kb on + strand, within IAI46_06915 at 1465.449 kb on + strand, within IAI46_06915 at 1465.450 kb on - strand, within IAI46_06915 at 1465.450 kb on - strand, within IAI46_06915 at 1465.544 kb on - strand, within IAI46_06915 at 1465.544 kb on - strand, within IAI46_06915 at 1465.675 kb on - strand, within IAI46_06915 at 1465.828 kb on + strand, within IAI46_06915 at 1465.916 kb on - strand, within IAI46_06915 at 1465.927 kb on + strand, within IAI46_06915 at 1465.928 kb on - strand, within IAI46_06915 at 1465.966 kb on + strand, within IAI46_06915 at 1465.980 kb on + strand, within IAI46_06915 at 1465.980 kb on + strand, within IAI46_06915 at 1465.981 kb on - strand, within IAI46_06915 at 1465.981 kb on - strand, within IAI46_06915 at 1465.981 kb on - strand, within IAI46_06915 at 1466.067 kb on + strand, within IAI46_06915 at 1466.068 kb on - strand, within IAI46_06915 at 1466.224 kb on - strand, within IAI46_06915 at 1466.296 kb on + strand, within IAI46_06915 at 1466.398 kb on - strand, within IAI46_06915 at 1466.398 kb on - strand, within IAI46_06915 at 1466.539 kb on + strand, within IAI46_06915 at 1466.540 kb on - strand, within IAI46_06915 at 1466.611 kb on + strand, within IAI46_06915 at 1466.612 kb on - strand, within IAI46_06915 at 1466.620 kb on + strand, within IAI46_06915 at 1466.621 kb on - strand, within IAI46_06915 at 1466.632 kb on - strand, within IAI46_06915 at 1466.632 kb on - strand, within IAI46_06915 at 1466.632 kb on - strand, within IAI46_06915 at 1466.864 kb on - strand at 1467.030 kb on - strand at 1467.030 kb on - strand at 1467.213 kb on + strand, within IAI46_06920 at 1467.314 kb on + strand, within IAI46_06920 at 1467.327 kb on + strand, within IAI46_06920 at 1467.328 kb on - strand, within IAI46_06920 at 1467.428 kb on + strand, within IAI46_06920 at 1467.428 kb on + strand, within IAI46_06920 at 1467.429 kb on - strand, within IAI46_06920 at 1467.429 kb on - strand, within IAI46_06920 at 1467.435 kb on + strand, within IAI46_06920 at 1467.501 kb on + strand, within IAI46_06920 at 1467.501 kb on + strand, within IAI46_06920 at 1467.502 kb on - strand, within IAI46_06920 at 1467.503 kb on + strand, within IAI46_06920 at 1467.523 kb on - strand, within IAI46_06920 at 1467.523 kb on - strand, within IAI46_06920 at 1467.557 kb on - strand, within IAI46_06920 at 1467.607 kb on - strand, within IAI46_06920 at 1467.643 kb on - strand, within IAI46_06920 at 1467.694 kb on - strand, within IAI46_06920 at 1467.711 kb on + strand, within IAI46_06920 at 1467.721 kb on + strand, within IAI46_06920 at 1467.721 kb on + strand, within IAI46_06920 at 1467.739 kb on - strand, within IAI46_06920 at 1467.739 kb on - strand, within IAI46_06920 at 1467.880 kb on + strand, within IAI46_06925
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 1,464,372 - IAI46_06905 0.89 -0.1 1,464,383 + IAI46_06905 0.89 -1.0 1,464,384 - IAI46_06905 0.89 +1.0 1,464,431 + +1.4 1,464,461 + -0.6 1,464,478 + -0.3 1,464,513 + -0.3 1,464,526 + +0.8 1,464,527 - +0.5 1,464,555 - +0.5 1,464,558 + +0.1 1,464,558 + +0.1 1,464,559 - -0.5 1,464,563 + +0.3 1,464,648 - IAI46_06910 0.22 +0.1 1,464,648 - IAI46_06910 0.22 +0.6 1,464,674 + IAI46_06910 0.28 +0.5 1,464,704 + IAI46_06910 0.35 -1.2 1,464,704 + IAI46_06910 0.35 -0.3 1,464,705 - IAI46_06910 0.36 +0.2 1,464,705 - IAI46_06910 0.36 +0.1 1,464,763 - IAI46_06910 0.49 +1.3 1,464,763 - IAI46_06910 0.49 +1.1 1,464,768 + IAI46_06910 0.50 +0.2 1,464,784 - IAI46_06910 0.54 -0.5 1,464,786 - IAI46_06910 0.55 +0.7 1,464,887 + IAI46_06910 0.78 +0.4 1,464,887 + IAI46_06910 0.78 +1.1 1,464,887 + IAI46_06910 0.78 -0.9 1,464,887 + IAI46_06910 0.78 +0.0 1,464,887 + IAI46_06910 0.78 -1.3 1,464,888 - IAI46_06910 0.79 -0.7 1,464,888 - IAI46_06910 0.79 +0.7 1,464,888 - IAI46_06910 0.79 -0.3 1,464,981 + -1.7 1,465,030 + -0.2 1,465,031 - +0.6 1,465,077 + +0.9 1,465,078 - -1.3 1,465,272 + +0.5 1,465,302 + +1.0 1,465,302 + +0.7 1,465,302 + +0.4 1,465,302 + -0.6 1,465,318 + +0.0 1,465,319 - +0.0 1,465,410 + IAI46_06915 0.13 +0.5 1,465,411 - IAI46_06915 0.13 +0.4 1,465,435 + IAI46_06915 0.14 -0.5 1,465,435 + IAI46_06915 0.14 +1.1 1,465,436 - IAI46_06915 0.14 -0.4 1,465,436 - IAI46_06915 0.14 -1.0 1,465,436 - IAI46_06915 0.14 +1.3 1,465,446 + IAI46_06915 0.15 +0.6 1,465,446 + IAI46_06915 0.15 +0.4 1,465,449 + IAI46_06915 0.15 +0.6 1,465,450 - IAI46_06915 0.15 +0.5 1,465,450 - IAI46_06915 0.15 -0.2 1,465,544 - IAI46_06915 0.21 -1.4 1,465,544 - IAI46_06915 0.21 +0.1 1,465,675 - IAI46_06915 0.28 -0.2 1,465,828 + IAI46_06915 0.37 +0.3 1,465,916 - IAI46_06915 0.42 +0.6 1,465,927 + IAI46_06915 0.43 +1.2 1,465,928 - IAI46_06915 0.43 -0.2 1,465,966 + IAI46_06915 0.45 -0.7 1,465,980 + IAI46_06915 0.46 +0.1 1,465,980 + IAI46_06915 0.46 +1.1 1,465,981 - IAI46_06915 0.46 -0.5 1,465,981 - IAI46_06915 0.46 +0.3 1,465,981 - IAI46_06915 0.46 +0.3 1,466,067 + IAI46_06915 0.51 +0.6 1,466,068 - IAI46_06915 0.51 -1.2 1,466,224 - IAI46_06915 0.60 +0.5 1,466,296 + IAI46_06915 0.65 +0.3 1,466,398 - IAI46_06915 0.70 -0.0 1,466,398 - IAI46_06915 0.70 -0.5 1,466,539 + IAI46_06915 0.79 +0.5 1,466,540 - IAI46_06915 0.79 +0.4 1,466,611 + IAI46_06915 0.83 -0.3 1,466,612 - IAI46_06915 0.83 +0.4 1,466,620 + IAI46_06915 0.83 -0.9 1,466,621 - IAI46_06915 0.83 +0.6 1,466,632 - IAI46_06915 0.84 -1.6 1,466,632 - IAI46_06915 0.84 +0.8 1,466,632 - IAI46_06915 0.84 +0.1 1,466,864 - +0.3 1,467,030 - -0.7 1,467,030 - +1.1 1,467,213 + IAI46_06920 0.24 -0.6 1,467,314 + IAI46_06920 0.36 -0.6 1,467,327 + IAI46_06920 0.38 -0.6 1,467,328 - IAI46_06920 0.38 +0.3 1,467,428 + IAI46_06920 0.51 -0.1 1,467,428 + IAI46_06920 0.51 +0.8 1,467,429 - IAI46_06920 0.51 +0.5 1,467,429 - IAI46_06920 0.51 +0.3 1,467,435 + IAI46_06920 0.52 +0.5 1,467,501 + IAI46_06920 0.60 +0.3 1,467,501 + IAI46_06920 0.60 -0.0 1,467,502 - IAI46_06920 0.60 -1.1 1,467,503 + IAI46_06920 0.60 -0.3 1,467,523 - IAI46_06920 0.63 +0.9 1,467,523 - IAI46_06920 0.63 +0.0 1,467,557 - IAI46_06920 0.67 +0.1 1,467,607 - IAI46_06920 0.73 +0.2 1,467,643 - IAI46_06920 0.78 +0.2 1,467,694 - IAI46_06920 0.84 +0.5 1,467,711 + IAI46_06920 0.86 +0.3 1,467,721 + IAI46_06920 0.88 -2.4 1,467,721 + IAI46_06920 0.88 -0.1 1,467,739 - IAI46_06920 0.90 +0.4 1,467,739 - IAI46_06920 0.90 +0.8 1,467,880 + IAI46_06925 0.31 -1.4
Or see this region's nucleotide sequence