Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_05845 and IAI46_05850 are separated by 49 nucleotides IAI46_05850 and IAI46_05855 are separated by 10 nucleotides IAI46_05855 and IAI46_05860 are separated by 29 nucleotides
IAI46_05845: IAI46_05845 - amino acid ABC transporter permease, at 1,254,691 to 1,255,578
_05845
IAI46_05850: IAI46_05850 - GNAT family N-acetyltransferase, at 1,255,628 to 1,256,155
_05850
IAI46_05855: IAI46_05855 - ABC transporter substrate-binding protein, at 1,256,166 to 1,257,098
_05855
IAI46_05860: IAI46_05860 - LLM class flavin-dependent oxidoreductase, at 1,257,128 to 1,258,453
_05860
Position (kb)
1256
1257
1258 Strain fitness (log2 ratio)
-2
-1
0
1 at 1255.188 kb on + strand, within IAI46_05845 at 1255.197 kb on + strand, within IAI46_05845 at 1255.197 kb on + strand, within IAI46_05845 at 1255.198 kb on - strand, within IAI46_05845 at 1255.217 kb on + strand, within IAI46_05845 at 1255.217 kb on + strand, within IAI46_05845 at 1255.283 kb on + strand, within IAI46_05845 at 1255.284 kb on + strand, within IAI46_05845 at 1255.285 kb on - strand, within IAI46_05845 at 1255.285 kb on - strand, within IAI46_05845 at 1255.285 kb on - strand, within IAI46_05845 at 1255.286 kb on + strand, within IAI46_05845 at 1255.286 kb on + strand, within IAI46_05845 at 1255.287 kb on - strand, within IAI46_05845 at 1255.313 kb on + strand, within IAI46_05845 at 1255.313 kb on + strand, within IAI46_05845 at 1255.314 kb on - strand, within IAI46_05845 at 1255.314 kb on - strand, within IAI46_05845 at 1255.708 kb on - strand, within IAI46_05850 at 1255.722 kb on + strand, within IAI46_05850 at 1255.723 kb on - strand, within IAI46_05850 at 1255.777 kb on - strand, within IAI46_05850 at 1255.819 kb on - strand, within IAI46_05850 at 1255.868 kb on + strand, within IAI46_05850 at 1255.916 kb on - strand, within IAI46_05850 at 1255.945 kb on - strand, within IAI46_05850 at 1256.055 kb on + strand, within IAI46_05850 at 1256.055 kb on + strand, within IAI46_05850 at 1256.056 kb on - strand, within IAI46_05850 at 1256.160 kb on - strand at 1256.160 kb on - strand at 1256.160 kb on - strand at 1256.160 kb on - strand at 1256.160 kb on - strand at 1256.167 kb on + strand at 1256.238 kb on + strand at 1256.238 kb on + strand at 1256.238 kb on + strand at 1256.239 kb on - strand at 1256.249 kb on - strand at 1256.293 kb on + strand, within IAI46_05855 at 1256.293 kb on + strand, within IAI46_05855 at 1256.294 kb on - strand, within IAI46_05855 at 1256.294 kb on - strand, within IAI46_05855 at 1256.359 kb on - strand, within IAI46_05855 at 1256.401 kb on + strand, within IAI46_05855 at 1256.402 kb on - strand, within IAI46_05855 at 1256.402 kb on - strand, within IAI46_05855 at 1256.429 kb on - strand, within IAI46_05855 at 1256.486 kb on - strand, within IAI46_05855 at 1256.486 kb on - strand, within IAI46_05855 at 1256.486 kb on - strand, within IAI46_05855 at 1256.609 kb on + strand, within IAI46_05855 at 1256.641 kb on + strand, within IAI46_05855 at 1256.642 kb on - strand, within IAI46_05855 at 1256.666 kb on - strand, within IAI46_05855 at 1256.666 kb on - strand, within IAI46_05855 at 1256.690 kb on + strand, within IAI46_05855 at 1256.853 kb on - strand, within IAI46_05855 at 1256.886 kb on - strand, within IAI46_05855 at 1257.048 kb on + strand at 1257.105 kb on + strand at 1257.121 kb on - strand at 1257.123 kb on + strand at 1257.124 kb on - strand at 1257.124 kb on - strand at 1257.124 kb on - strand at 1257.193 kb on - strand at 1257.516 kb on + strand, within IAI46_05860 at 1257.517 kb on - strand, within IAI46_05860 at 1257.528 kb on + strand, within IAI46_05860 at 1257.528 kb on + strand, within IAI46_05860 at 1257.540 kb on + strand, within IAI46_05860 at 1257.540 kb on + strand, within IAI46_05860 at 1257.540 kb on + strand, within IAI46_05860 at 1257.586 kb on - strand, within IAI46_05860 at 1257.833 kb on - strand, within IAI46_05860 at 1257.880 kb on + strand, within IAI46_05860
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 1,255,188 + IAI46_05845 0.56 -0.1 1,255,197 + IAI46_05845 0.57 +0.4 1,255,197 + IAI46_05845 0.57 +0.2 1,255,198 - IAI46_05845 0.57 -0.4 1,255,217 + IAI46_05845 0.59 +0.1 1,255,217 + IAI46_05845 0.59 -0.2 1,255,283 + IAI46_05845 0.67 -1.9 1,255,284 + IAI46_05845 0.67 +0.0 1,255,285 - IAI46_05845 0.67 -1.2 1,255,285 - IAI46_05845 0.67 +0.3 1,255,285 - IAI46_05845 0.67 +0.5 1,255,286 + IAI46_05845 0.67 +0.7 1,255,286 + IAI46_05845 0.67 -0.2 1,255,287 - IAI46_05845 0.67 -1.0 1,255,313 + IAI46_05845 0.70 -0.1 1,255,313 + IAI46_05845 0.70 -0.1 1,255,314 - IAI46_05845 0.70 +0.3 1,255,314 - IAI46_05845 0.70 +0.5 1,255,708 - IAI46_05850 0.15 -0.5 1,255,722 + IAI46_05850 0.18 -0.9 1,255,723 - IAI46_05850 0.18 +0.3 1,255,777 - IAI46_05850 0.28 +1.0 1,255,819 - IAI46_05850 0.36 +0.2 1,255,868 + IAI46_05850 0.45 +0.2 1,255,916 - IAI46_05850 0.55 +0.5 1,255,945 - IAI46_05850 0.60 -0.9 1,256,055 + IAI46_05850 0.81 +0.6 1,256,055 + IAI46_05850 0.81 -0.5 1,256,056 - IAI46_05850 0.81 +0.2 1,256,160 - +0.7 1,256,160 - -0.4 1,256,160 - -0.1 1,256,160 - +0.3 1,256,160 - -0.1 1,256,167 + +0.4 1,256,238 + +0.7 1,256,238 + +0.5 1,256,238 + -0.1 1,256,239 - +0.9 1,256,249 - +0.1 1,256,293 + IAI46_05855 0.14 +0.9 1,256,293 + IAI46_05855 0.14 +0.1 1,256,294 - IAI46_05855 0.14 -0.2 1,256,294 - IAI46_05855 0.14 -1.1 1,256,359 - IAI46_05855 0.21 +0.4 1,256,401 + IAI46_05855 0.25 -1.2 1,256,402 - IAI46_05855 0.25 +0.3 1,256,402 - IAI46_05855 0.25 +0.4 1,256,429 - IAI46_05855 0.28 -0.7 1,256,486 - IAI46_05855 0.34 -0.1 1,256,486 - IAI46_05855 0.34 -0.4 1,256,486 - IAI46_05855 0.34 -0.4 1,256,609 + IAI46_05855 0.47 -0.9 1,256,641 + IAI46_05855 0.51 -0.0 1,256,642 - IAI46_05855 0.51 +1.3 1,256,666 - IAI46_05855 0.54 +0.1 1,256,666 - IAI46_05855 0.54 +1.4 1,256,690 + IAI46_05855 0.56 +0.4 1,256,853 - IAI46_05855 0.74 -0.1 1,256,886 - IAI46_05855 0.77 +0.4 1,257,048 + -0.6 1,257,105 + +0.3 1,257,121 - +0.5 1,257,123 + +1.1 1,257,124 - -0.6 1,257,124 - +0.6 1,257,124 - +0.4 1,257,193 - -0.0 1,257,516 + IAI46_05860 0.29 -0.4 1,257,517 - IAI46_05860 0.29 +0.6 1,257,528 + IAI46_05860 0.30 +0.5 1,257,528 + IAI46_05860 0.30 -1.2 1,257,540 + IAI46_05860 0.31 +1.0 1,257,540 + IAI46_05860 0.31 +0.1 1,257,540 + IAI46_05860 0.31 +0.7 1,257,586 - IAI46_05860 0.35 +1.2 1,257,833 - IAI46_05860 0.53 +0.6 1,257,880 + IAI46_05860 0.57 -0.1
Or see this region's nucleotide sequence