Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_05740 and IAI46_05745 are separated by 205 nucleotides IAI46_05745 and IAI46_05750 are separated by 56 nucleotides
IAI46_05740: IAI46_05740 - LysR family transcriptional regulator, at 1,235,252 to 1,236,139
_05740
IAI46_05745: IAI46_05745 - gamma-glutamylcyclotransferase, at 1,236,345 to 1,236,671
_05745
IAI46_05750: IAI46_05750 - amidohydrolase, at 1,236,728 to 1,237,723
_05750
Position (kb)
1236
1237 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1235.401 kb on + strand, within IAI46_05740 at 1235.402 kb on - strand, within IAI46_05740 at 1235.402 kb on - strand, within IAI46_05740 at 1235.443 kb on - strand, within IAI46_05740 at 1235.530 kb on - strand, within IAI46_05740 at 1235.530 kb on - strand, within IAI46_05740 at 1235.591 kb on - strand, within IAI46_05740 at 1235.623 kb on + strand, within IAI46_05740 at 1235.624 kb on - strand, within IAI46_05740 at 1235.682 kb on + strand, within IAI46_05740 at 1235.709 kb on + strand, within IAI46_05740 at 1235.709 kb on + strand, within IAI46_05740 at 1235.709 kb on + strand, within IAI46_05740 at 1235.709 kb on + strand, within IAI46_05740 at 1235.709 kb on + strand, within IAI46_05740 at 1235.709 kb on + strand, within IAI46_05740 at 1235.709 kb on + strand, within IAI46_05740 at 1235.709 kb on + strand, within IAI46_05740 at 1235.710 kb on - strand, within IAI46_05740 at 1235.710 kb on - strand, within IAI46_05740 at 1235.739 kb on + strand, within IAI46_05740 at 1235.740 kb on - strand, within IAI46_05740 at 1235.842 kb on + strand, within IAI46_05740 at 1235.843 kb on - strand, within IAI46_05740 at 1235.892 kb on + strand, within IAI46_05740 at 1235.892 kb on + strand, within IAI46_05740 at 1235.893 kb on - strand, within IAI46_05740 at 1235.893 kb on - strand, within IAI46_05740 at 1235.893 kb on - strand, within IAI46_05740 at 1235.894 kb on + strand, within IAI46_05740 at 1235.894 kb on + strand, within IAI46_05740 at 1235.894 kb on + strand, within IAI46_05740 at 1235.894 kb on + strand, within IAI46_05740 at 1235.894 kb on + strand, within IAI46_05740 at 1235.894 kb on + strand, within IAI46_05740 at 1235.894 kb on + strand, within IAI46_05740 at 1235.894 kb on + strand, within IAI46_05740 at 1235.895 kb on - strand, within IAI46_05740 at 1235.895 kb on - strand, within IAI46_05740 at 1235.895 kb on - strand, within IAI46_05740 at 1235.895 kb on - strand, within IAI46_05740 at 1235.895 kb on - strand, within IAI46_05740 at 1235.896 kb on + strand, within IAI46_05740 at 1235.897 kb on - strand, within IAI46_05740 at 1235.897 kb on - strand, within IAI46_05740 at 1235.912 kb on - strand, within IAI46_05740 at 1236.037 kb on - strand, within IAI46_05740 at 1236.056 kb on - strand at 1236.062 kb on + strand at 1236.063 kb on - strand at 1236.127 kb on + strand at 1236.127 kb on + strand at 1236.198 kb on + strand at 1236.284 kb on + strand at 1236.307 kb on + strand at 1236.308 kb on - strand at 1236.317 kb on - strand at 1236.341 kb on + strand at 1236.341 kb on + strand at 1236.341 kb on + strand at 1236.341 kb on + strand at 1236.342 kb on - strand at 1236.342 kb on - strand at 1236.374 kb on - strand at 1236.483 kb on + strand, within IAI46_05745 at 1236.503 kb on + strand, within IAI46_05745 at 1236.621 kb on - strand, within IAI46_05745 at 1236.654 kb on + strand at 1236.654 kb on + strand at 1236.655 kb on - strand at 1236.655 kb on - strand at 1236.688 kb on + strand at 1236.688 kb on + strand at 1236.688 kb on + strand at 1236.784 kb on + strand at 1236.785 kb on - strand at 1236.890 kb on - strand, within IAI46_05750 at 1236.968 kb on - strand, within IAI46_05750 at 1237.032 kb on + strand, within IAI46_05750 at 1237.178 kb on - strand, within IAI46_05750 at 1237.199 kb on - strand, within IAI46_05750 at 1237.211 kb on + strand, within IAI46_05750 at 1237.212 kb on - strand, within IAI46_05750 at 1237.212 kb on - strand, within IAI46_05750 at 1237.212 kb on - strand, within IAI46_05750 at 1237.212 kb on - strand, within IAI46_05750 at 1237.289 kb on + strand, within IAI46_05750 at 1237.297 kb on + strand, within IAI46_05750 at 1237.297 kb on + strand, within IAI46_05750 at 1237.297 kb on + strand, within IAI46_05750 at 1237.301 kb on + strand, within IAI46_05750 at 1237.482 kb on + strand, within IAI46_05750 at 1237.483 kb on - strand, within IAI46_05750 at 1237.578 kb on + strand, within IAI46_05750 at 1237.578 kb on + strand, within IAI46_05750 at 1237.597 kb on + strand, within IAI46_05750 at 1237.597 kb on + strand, within IAI46_05750 at 1237.597 kb on + strand, within IAI46_05750
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 1,235,401 + IAI46_05740 0.17 -0.6 1,235,402 - IAI46_05740 0.17 -0.6 1,235,402 - IAI46_05740 0.17 +0.3 1,235,443 - IAI46_05740 0.22 -1.1 1,235,530 - IAI46_05740 0.31 +0.9 1,235,530 - IAI46_05740 0.31 -0.8 1,235,591 - IAI46_05740 0.38 -1.0 1,235,623 + IAI46_05740 0.42 +1.5 1,235,624 - IAI46_05740 0.42 +0.1 1,235,682 + IAI46_05740 0.48 -0.3 1,235,709 + IAI46_05740 0.51 +0.2 1,235,709 + IAI46_05740 0.51 -1.1 1,235,709 + IAI46_05740 0.51 -0.1 1,235,709 + IAI46_05740 0.51 -0.3 1,235,709 + IAI46_05740 0.51 -0.9 1,235,709 + IAI46_05740 0.51 -0.1 1,235,709 + IAI46_05740 0.51 -0.2 1,235,709 + IAI46_05740 0.51 -1.1 1,235,710 - IAI46_05740 0.52 +1.2 1,235,710 - IAI46_05740 0.52 +0.8 1,235,739 + IAI46_05740 0.55 +1.2 1,235,740 - IAI46_05740 0.55 +0.4 1,235,842 + IAI46_05740 0.66 +0.4 1,235,843 - IAI46_05740 0.67 +1.1 1,235,892 + IAI46_05740 0.72 +1.8 1,235,892 + IAI46_05740 0.72 -2.2 1,235,893 - IAI46_05740 0.72 -0.1 1,235,893 - IAI46_05740 0.72 -0.6 1,235,893 - IAI46_05740 0.72 +0.0 1,235,894 + IAI46_05740 0.72 -0.4 1,235,894 + IAI46_05740 0.72 -0.1 1,235,894 + IAI46_05740 0.72 -0.5 1,235,894 + IAI46_05740 0.72 +0.3 1,235,894 + IAI46_05740 0.72 +0.2 1,235,894 + IAI46_05740 0.72 -1.5 1,235,894 + IAI46_05740 0.72 -0.4 1,235,894 + IAI46_05740 0.72 +0.9 1,235,895 - IAI46_05740 0.72 +0.4 1,235,895 - IAI46_05740 0.72 +0.5 1,235,895 - IAI46_05740 0.72 -1.8 1,235,895 - IAI46_05740 0.72 +0.3 1,235,895 - IAI46_05740 0.72 +0.4 1,235,896 + IAI46_05740 0.73 -0.1 1,235,897 - IAI46_05740 0.73 +0.9 1,235,897 - IAI46_05740 0.73 +0.8 1,235,912 - IAI46_05740 0.74 -1.4 1,236,037 - IAI46_05740 0.88 +0.5 1,236,056 - -1.1 1,236,062 + +0.8 1,236,063 - +1.0 1,236,127 + -0.9 1,236,127 + +0.6 1,236,198 + -0.2 1,236,284 + -0.6 1,236,307 + +0.0 1,236,308 - +1.1 1,236,317 - +1.6 1,236,341 + +1.2 1,236,341 + +0.6 1,236,341 + -0.0 1,236,341 + +0.5 1,236,342 - +1.2 1,236,342 - -0.9 1,236,374 - -0.5 1,236,483 + IAI46_05745 0.42 +0.5 1,236,503 + IAI46_05745 0.48 +0.3 1,236,621 - IAI46_05745 0.84 +1.0 1,236,654 + +0.3 1,236,654 + +0.0 1,236,655 - -0.5 1,236,655 - +0.4 1,236,688 + -0.7 1,236,688 + -0.6 1,236,688 + -1.1 1,236,784 + -0.2 1,236,785 - -0.4 1,236,890 - IAI46_05750 0.16 -0.7 1,236,968 - IAI46_05750 0.24 +0.4 1,237,032 + IAI46_05750 0.31 +0.3 1,237,178 - IAI46_05750 0.45 +0.9 1,237,199 - IAI46_05750 0.47 -1.7 1,237,211 + IAI46_05750 0.48 +0.8 1,237,212 - IAI46_05750 0.49 +1.2 1,237,212 - IAI46_05750 0.49 -0.4 1,237,212 - IAI46_05750 0.49 +0.5 1,237,212 - IAI46_05750 0.49 +0.2 1,237,289 + IAI46_05750 0.56 -0.6 1,237,297 + IAI46_05750 0.57 -0.2 1,237,297 + IAI46_05750 0.57 +0.1 1,237,297 + IAI46_05750 0.57 +0.4 1,237,301 + IAI46_05750 0.58 +0.0 1,237,482 + IAI46_05750 0.76 -0.3 1,237,483 - IAI46_05750 0.76 -0.1 1,237,578 + IAI46_05750 0.85 +0.4 1,237,578 + IAI46_05750 0.85 -1.6 1,237,597 + IAI46_05750 0.87 +0.4 1,237,597 + IAI46_05750 0.87 -0.4 1,237,597 + IAI46_05750 0.87 +0.0
Or see this region's nucleotide sequence