Strain Fitness in Serratia liquefaciens MT49 around IAI46_03425

Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntIAI46_03420 and IAI46_03425 overlap by 7 nucleotidesIAI46_03425 and IAI46_03430 are separated by 2 nucleotides IAI46_03420: IAI46_03420 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase, at 740,802 to 742,163 _03420 IAI46_03425: IAI46_03425 - phospho-N-acetylmuramoyl-pentapeptide- transferase, at 742,157 to 743,239 _03425 IAI46_03430: IAI46_03430 - UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase, at 743,242 to 744,561 _03430 Position (kb) 742 743 744Strain fitness (log2 ratio) -1 0 1at 742.129 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
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742,129 + +0.3

Or see this region's nucleotide sequence