Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_01150 and IAI46_01155 are separated by 22 nucleotides IAI46_01155 and IAI46_01160 are separated by 451 nucleotides
IAI46_01150: IAI46_01150 - Trk system potassium transporter TrkH, at 255,607 to 257,058
_01150
IAI46_01155: IAI46_01155 - menaquinone-dependent protoporphyrinogen IX dehydrogenase, at 257,081 to 257,614
_01155
IAI46_01160: IAI46_01160 - 16S ribosomal RNA, at 258,066 to 259,610
_01160
Position (kb) 257
258 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 256.087 kb on + strand, within IAI46_01150 at 256.171 kb on + strand, within IAI46_01150 at 256.171 kb on + strand, within IAI46_01150 at 256.172 kb on - strand, within IAI46_01150 at 256.238 kb on + strand, within IAI46_01150 at 256.238 kb on + strand, within IAI46_01150 at 256.239 kb on - strand, within IAI46_01150 at 256.245 kb on + strand, within IAI46_01150 at 256.246 kb on - strand, within IAI46_01150 at 256.246 kb on - strand, within IAI46_01150 at 256.278 kb on + strand, within IAI46_01150 at 256.304 kb on - strand, within IAI46_01150 at 256.329 kb on + strand, within IAI46_01150 at 256.329 kb on + strand, within IAI46_01150 at 256.329 kb on + strand, within IAI46_01150 at 256.329 kb on + strand, within IAI46_01150 at 256.330 kb on - strand, within IAI46_01150 at 256.330 kb on - strand, within IAI46_01150 at 256.330 kb on - strand, within IAI46_01150 at 256.336 kb on - strand, within IAI46_01150 at 256.359 kb on + strand, within IAI46_01150 at 256.359 kb on + strand, within IAI46_01150 at 256.359 kb on + strand, within IAI46_01150 at 256.359 kb on + strand, within IAI46_01150 at 256.359 kb on + strand, within IAI46_01150 at 256.359 kb on + strand, within IAI46_01150 at 256.360 kb on - strand, within IAI46_01150 at 256.360 kb on - strand, within IAI46_01150 at 256.360 kb on - strand, within IAI46_01150 at 256.360 kb on - strand, within IAI46_01150 at 256.363 kb on + strand, within IAI46_01150 at 256.364 kb on - strand, within IAI46_01150 at 256.478 kb on + strand, within IAI46_01150 at 256.478 kb on + strand, within IAI46_01150 at 256.478 kb on + strand, within IAI46_01150 at 256.569 kb on + strand, within IAI46_01150 at 256.570 kb on - strand, within IAI46_01150 at 256.693 kb on + strand, within IAI46_01150 at 256.694 kb on - strand, within IAI46_01150 at 256.716 kb on - strand, within IAI46_01150 at 256.734 kb on + strand, within IAI46_01150 at 256.751 kb on + strand, within IAI46_01150 at 256.947 kb on + strand at 256.947 kb on + strand at 256.948 kb on - strand at 256.948 kb on - strand at 256.948 kb on - strand at 256.951 kb on - strand at 256.951 kb on - strand at 257.016 kb on + strand at 257.065 kb on + strand at 257.065 kb on + strand at 257.065 kb on + strand at 257.065 kb on + strand at 257.597 kb on - strand at 257.603 kb on + strand at 257.604 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 256,087 + IAI46_01150 0.33 -0.3 256,171 + IAI46_01150 0.39 +0.1 256,171 + IAI46_01150 0.39 +0.1 256,172 - IAI46_01150 0.39 +0.6 256,238 + IAI46_01150 0.43 -3.3 256,238 + IAI46_01150 0.43 -1.6 256,239 - IAI46_01150 0.44 -0.2 256,245 + IAI46_01150 0.44 +1.3 256,246 - IAI46_01150 0.44 +0.5 256,246 - IAI46_01150 0.44 -0.2 256,278 + IAI46_01150 0.46 -0.6 256,304 - IAI46_01150 0.48 -1.5 256,329 + IAI46_01150 0.50 +0.2 256,329 + IAI46_01150 0.50 +0.5 256,329 + IAI46_01150 0.50 +0.9 256,329 + IAI46_01150 0.50 -0.2 256,330 - IAI46_01150 0.50 +0.1 256,330 - IAI46_01150 0.50 +0.4 256,330 - IAI46_01150 0.50 -0.1 256,336 - IAI46_01150 0.50 -0.1 256,359 + IAI46_01150 0.52 +0.0 256,359 + IAI46_01150 0.52 +0.4 256,359 + IAI46_01150 0.52 -0.2 256,359 + IAI46_01150 0.52 +1.0 256,359 + IAI46_01150 0.52 -1.2 256,359 + IAI46_01150 0.52 -0.5 256,360 - IAI46_01150 0.52 +0.1 256,360 - IAI46_01150 0.52 -0.4 256,360 - IAI46_01150 0.52 +0.4 256,360 - IAI46_01150 0.52 +1.6 256,363 + IAI46_01150 0.52 -0.2 256,364 - IAI46_01150 0.52 +0.1 256,478 + IAI46_01150 0.60 -0.9 256,478 + IAI46_01150 0.60 +1.7 256,478 + IAI46_01150 0.60 +0.7 256,569 + IAI46_01150 0.66 -0.3 256,570 - IAI46_01150 0.66 +0.1 256,693 + IAI46_01150 0.75 -0.6 256,694 - IAI46_01150 0.75 -0.2 256,716 - IAI46_01150 0.76 -0.1 256,734 + IAI46_01150 0.78 -0.8 256,751 + IAI46_01150 0.79 -0.2 256,947 + +0.7 256,947 + -0.0 256,948 - +0.1 256,948 - -0.8 256,948 - -1.0 256,951 - +1.8 256,951 - -0.8 257,016 + +0.0 257,065 + -1.1 257,065 + -0.4 257,065 + +0.3 257,065 + -0.1 257,597 - +0.1 257,603 + -1.0 257,604 - +0.3
Or see this region's nucleotide sequence