Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_00855 and IAI46_00860 are separated by 662 nucleotides IAI46_00860 and IAI46_00865 are separated by 55 nucleotides IAI46_00865 and IAI46_00870 are separated by 39 nucleotides
IAI46_00855: IAI46_00855 - zinc/cadmium/mercury/lead-transporting ATPase, at 193,102 to 195,417
_00855
IAI46_00860: IAI46_00860 - M10 family metallopeptidase, at 196,080 to 197,543
_00860
IAI46_00865: IAI46_00865 - AprI/Inh family metalloprotease inhibitor, at 197,599 to 197,976
_00865
IAI46_00870: IAI46_00870 - lysoplasmalogenase, at 198,016 to 198,642
_00870
Position (kb) 196
197
198 Strain fitness (log2 ratio) -1
0
1 at 195.091 kb on + strand, within IAI46_00855 at 195.092 kb on - strand, within IAI46_00855 at 195.154 kb on - strand, within IAI46_00855 at 195.174 kb on - strand, within IAI46_00855 at 195.381 kb on + strand at 195.382 kb on - strand at 195.382 kb on - strand at 195.382 kb on - strand at 195.411 kb on + strand at 195.412 kb on - strand at 195.412 kb on - strand at 195.412 kb on - strand at 195.417 kb on + strand at 195.417 kb on + strand at 195.418 kb on - strand at 195.418 kb on - strand at 195.439 kb on + strand at 195.439 kb on + strand at 195.439 kb on + strand at 195.464 kb on - strand at 195.506 kb on + strand at 195.507 kb on - strand at 195.541 kb on - strand at 195.541 kb on - strand at 195.563 kb on + strand at 195.656 kb on - strand at 195.658 kb on + strand at 195.659 kb on - strand at 195.667 kb on - strand at 195.667 kb on - strand at 195.669 kb on + strand at 195.669 kb on + strand at 195.670 kb on - strand at 195.684 kb on + strand at 195.781 kb on + strand at 195.792 kb on - strand at 195.795 kb on - strand at 195.799 kb on + strand at 195.799 kb on + strand at 195.843 kb on + strand at 195.843 kb on + strand at 195.843 kb on + strand at 195.844 kb on - strand at 195.844 kb on - strand at 195.875 kb on - strand at 195.884 kb on + strand at 195.921 kb on + strand at 195.922 kb on - strand at 195.933 kb on + strand at 195.933 kb on + strand at 195.934 kb on - strand at 195.934 kb on - strand at 195.934 kb on - strand at 195.934 kb on - strand at 195.934 kb on - strand at 195.953 kb on - strand at 195.996 kb on + strand at 195.997 kb on - strand at 195.997 kb on - strand at 196.028 kb on + strand at 196.029 kb on - strand at 196.029 kb on - strand at 196.034 kb on + strand at 196.034 kb on + strand at 196.034 kb on + strand at 196.060 kb on + strand at 196.060 kb on + strand at 196.091 kb on + strand at 196.144 kb on - strand at 196.153 kb on + strand at 196.154 kb on - strand at 196.170 kb on + strand at 196.171 kb on - strand at 196.171 kb on - strand at 196.199 kb on + strand at 196.241 kb on + strand, within IAI46_00860 at 196.241 kb on + strand, within IAI46_00860 at 196.274 kb on + strand, within IAI46_00860 at 196.300 kb on + strand, within IAI46_00860 at 196.323 kb on - strand, within IAI46_00860 at 196.395 kb on - strand, within IAI46_00860 at 196.395 kb on - strand, within IAI46_00860 at 196.485 kb on + strand, within IAI46_00860 at 196.485 kb on + strand, within IAI46_00860 at 196.485 kb on + strand, within IAI46_00860 at 196.486 kb on - strand, within IAI46_00860 at 196.509 kb on + strand, within IAI46_00860 at 196.509 kb on + strand, within IAI46_00860 at 196.515 kb on + strand, within IAI46_00860 at 196.515 kb on + strand, within IAI46_00860 at 196.515 kb on + strand, within IAI46_00860 at 196.516 kb on - strand, within IAI46_00860 at 196.554 kb on + strand, within IAI46_00860 at 196.587 kb on + strand, within IAI46_00860 at 196.587 kb on + strand, within IAI46_00860 at 196.587 kb on + strand, within IAI46_00860 at 196.588 kb on - strand, within IAI46_00860 at 196.588 kb on - strand, within IAI46_00860 at 196.588 kb on - strand, within IAI46_00860 at 196.649 kb on + strand, within IAI46_00860 at 196.695 kb on + strand, within IAI46_00860 at 196.722 kb on + strand, within IAI46_00860 at 196.722 kb on + strand, within IAI46_00860 at 196.722 kb on + strand, within IAI46_00860 at 196.737 kb on + strand, within IAI46_00860 at 196.737 kb on + strand, within IAI46_00860 at 196.748 kb on + strand, within IAI46_00860 at 196.749 kb on - strand, within IAI46_00860 at 196.816 kb on - strand, within IAI46_00860 at 196.816 kb on - strand, within IAI46_00860 at 196.851 kb on - strand, within IAI46_00860 at 196.863 kb on + strand, within IAI46_00860 at 196.864 kb on - strand, within IAI46_00860 at 196.864 kb on - strand, within IAI46_00860 at 196.864 kb on - strand, within IAI46_00860 at 196.864 kb on - strand, within IAI46_00860 at 196.902 kb on + strand, within IAI46_00860 at 196.903 kb on - strand, within IAI46_00860 at 196.940 kb on + strand, within IAI46_00860 at 197.033 kb on + strand, within IAI46_00860 at 197.033 kb on + strand, within IAI46_00860 at 197.034 kb on - strand, within IAI46_00860 at 197.034 kb on - strand, within IAI46_00860 at 197.036 kb on + strand, within IAI46_00860 at 197.036 kb on + strand, within IAI46_00860 at 197.427 kb on + strand at 197.428 kb on - strand at 197.428 kb on - strand at 197.428 kb on - strand at 197.442 kb on - strand at 197.535 kb on - strand at 197.586 kb on + strand at 197.586 kb on + strand at 197.586 kb on + strand at 197.587 kb on - strand at 197.587 kb on - strand at 197.587 kb on - strand at 197.587 kb on - strand at 197.598 kb on + strand at 197.627 kb on + strand at 197.628 kb on - strand at 197.661 kb on + strand, within IAI46_00865 at 197.662 kb on - strand, within IAI46_00865 at 197.783 kb on - strand, within IAI46_00865 at 197.783 kb on - strand, within IAI46_00865 at 197.783 kb on - strand, within IAI46_00865 at 197.783 kb on - strand, within IAI46_00865 at 197.919 kb on + strand, within IAI46_00865 at 197.923 kb on + strand, within IAI46_00865 at 197.974 kb on + strand at 197.974 kb on + strand at 197.975 kb on - strand at 197.975 kb on - strand at 198.023 kb on + strand at 198.136 kb on + strand, within IAI46_00870 at 198.137 kb on - strand, within IAI46_00870 at 198.189 kb on + strand, within IAI46_00870 at 198.189 kb on + strand, within IAI46_00870 at 198.189 kb on + strand, within IAI46_00870 at 198.189 kb on + strand, within IAI46_00870 at 198.190 kb on - strand, within IAI46_00870 at 198.194 kb on + strand, within IAI46_00870 at 198.194 kb on + strand, within IAI46_00870 at 198.195 kb on - strand, within IAI46_00870 at 198.195 kb on - strand, within IAI46_00870 at 198.235 kb on + strand, within IAI46_00870 at 198.236 kb on - strand, within IAI46_00870 at 198.236 kb on - strand, within IAI46_00870 at 198.239 kb on + strand, within IAI46_00870 at 198.239 kb on + strand, within IAI46_00870 at 198.239 kb on + strand, within IAI46_00870 at 198.239 kb on + strand, within IAI46_00870 at 198.239 kb on + strand, within IAI46_00870 at 198.240 kb on - strand, within IAI46_00870 at 198.240 kb on - strand, within IAI46_00870 at 198.240 kb on - strand, within IAI46_00870 at 198.240 kb on - strand, within IAI46_00870 at 198.240 kb on - strand, within IAI46_00870 at 198.240 kb on - strand, within IAI46_00870 at 198.240 kb on - strand, within IAI46_00870 at 198.240 kb on - strand, within IAI46_00870 at 198.293 kb on - strand, within IAI46_00870 at 198.372 kb on + strand, within IAI46_00870 at 198.372 kb on + strand, within IAI46_00870 at 198.374 kb on + strand, within IAI46_00870 at 198.375 kb on - strand, within IAI46_00870 at 198.375 kb on - strand, within IAI46_00870 at 198.410 kb on + strand, within IAI46_00870 at 198.410 kb on + strand, within IAI46_00870 at 198.454 kb on + strand, within IAI46_00870 at 198.454 kb on + strand, within IAI46_00870
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 195,091 + IAI46_00855 0.86 +0.7 195,092 - IAI46_00855 0.86 -0.9 195,154 - IAI46_00855 0.89 +0.6 195,174 - IAI46_00855 0.89 +0.5 195,381 + +1.2 195,382 - +0.3 195,382 - -0.0 195,382 - -0.1 195,411 + -0.4 195,412 - -0.2 195,412 - +0.2 195,412 - +0.9 195,417 + +0.6 195,417 + +0.4 195,418 - +1.1 195,418 - -0.0 195,439 + -1.3 195,439 + -0.2 195,439 + +0.6 195,464 - +0.6 195,506 + +0.3 195,507 - +0.1 195,541 - -0.0 195,541 - -0.2 195,563 + -1.4 195,656 - +0.4 195,658 + -0.6 195,659 - +0.3 195,667 - -0.1 195,667 - +0.1 195,669 + +0.0 195,669 + -0.1 195,670 - +0.1 195,684 + -0.3 195,781 + +0.5 195,792 - -0.6 195,795 - -1.4 195,799 + +0.6 195,799 + +0.7 195,843 + -0.7 195,843 + +0.6 195,843 + -0.4 195,844 - +1.0 195,844 - +0.7 195,875 - +0.2 195,884 + -0.2 195,921 + -0.6 195,922 - -0.2 195,933 + -0.2 195,933 + +0.5 195,934 - +0.2 195,934 - -0.4 195,934 - -0.3 195,934 - -0.7 195,934 - -0.4 195,953 - -0.4 195,996 + +0.5 195,997 - -0.1 195,997 - +0.8 196,028 + -0.9 196,029 - -0.2 196,029 - -0.2 196,034 + -0.1 196,034 + -0.4 196,034 + -0.6 196,060 + -0.7 196,060 + +0.5 196,091 + +0.9 196,144 - +0.1 196,153 + +0.7 196,154 - -0.7 196,170 + -0.1 196,171 - -0.7 196,171 - +0.5 196,199 + +0.8 196,241 + IAI46_00860 0.11 +0.3 196,241 + IAI46_00860 0.11 +0.3 196,274 + IAI46_00860 0.13 -0.8 196,300 + IAI46_00860 0.15 +0.3 196,323 - IAI46_00860 0.17 +0.2 196,395 - IAI46_00860 0.22 +0.7 196,395 - IAI46_00860 0.22 +0.0 196,485 + IAI46_00860 0.28 -0.6 196,485 + IAI46_00860 0.28 -0.1 196,485 + IAI46_00860 0.28 +0.8 196,486 - IAI46_00860 0.28 +0.9 196,509 + IAI46_00860 0.29 +0.3 196,509 + IAI46_00860 0.29 +1.3 196,515 + IAI46_00860 0.30 -0.5 196,515 + IAI46_00860 0.30 +0.3 196,515 + IAI46_00860 0.30 -0.7 196,516 - IAI46_00860 0.30 -0.3 196,554 + IAI46_00860 0.32 +0.8 196,587 + IAI46_00860 0.35 -0.2 196,587 + IAI46_00860 0.35 -0.0 196,587 + IAI46_00860 0.35 +0.0 196,588 - IAI46_00860 0.35 +0.4 196,588 - IAI46_00860 0.35 -0.3 196,588 - IAI46_00860 0.35 +0.7 196,649 + IAI46_00860 0.39 +0.3 196,695 + IAI46_00860 0.42 +0.1 196,722 + IAI46_00860 0.44 -0.7 196,722 + IAI46_00860 0.44 +0.6 196,722 + IAI46_00860 0.44 -1.2 196,737 + IAI46_00860 0.45 +1.0 196,737 + IAI46_00860 0.45 +0.8 196,748 + IAI46_00860 0.46 -0.2 196,749 - IAI46_00860 0.46 +0.0 196,816 - IAI46_00860 0.50 -0.3 196,816 - IAI46_00860 0.50 +0.0 196,851 - IAI46_00860 0.53 +0.8 196,863 + IAI46_00860 0.53 -0.1 196,864 - IAI46_00860 0.54 +0.4 196,864 - IAI46_00860 0.54 -0.7 196,864 - IAI46_00860 0.54 +0.3 196,864 - IAI46_00860 0.54 +0.7 196,902 + IAI46_00860 0.56 +0.2 196,903 - IAI46_00860 0.56 -0.9 196,940 + IAI46_00860 0.59 +0.6 197,033 + IAI46_00860 0.65 +0.4 197,033 + IAI46_00860 0.65 +0.7 197,034 - IAI46_00860 0.65 -0.3 197,034 - IAI46_00860 0.65 +1.0 197,036 + IAI46_00860 0.65 +0.7 197,036 + IAI46_00860 0.65 +1.0 197,427 + -0.1 197,428 - -0.7 197,428 - +0.1 197,428 - -0.3 197,442 - -0.7 197,535 - -0.6 197,586 + +0.5 197,586 + -0.3 197,586 + +0.6 197,587 - -0.5 197,587 - -1.1 197,587 - -0.1 197,587 - +0.7 197,598 + -0.1 197,627 + -0.2 197,628 - +0.3 197,661 + IAI46_00865 0.16 +0.7 197,662 - IAI46_00865 0.17 -0.3 197,783 - IAI46_00865 0.49 +0.8 197,783 - IAI46_00865 0.49 -0.8 197,783 - IAI46_00865 0.49 +0.8 197,783 - IAI46_00865 0.49 +0.3 197,919 + IAI46_00865 0.85 +0.4 197,923 + IAI46_00865 0.86 +1.1 197,974 + +0.3 197,974 + -0.0 197,975 - -1.7 197,975 - -0.1 198,023 + +0.8 198,136 + IAI46_00870 0.19 +0.5 198,137 - IAI46_00870 0.19 -0.7 198,189 + IAI46_00870 0.28 -0.8 198,189 + IAI46_00870 0.28 -1.0 198,189 + IAI46_00870 0.28 -0.2 198,189 + IAI46_00870 0.28 -0.5 198,190 - IAI46_00870 0.28 +0.9 198,194 + IAI46_00870 0.28 +0.3 198,194 + IAI46_00870 0.28 -1.5 198,195 - IAI46_00870 0.29 -0.5 198,195 - IAI46_00870 0.29 +0.3 198,235 + IAI46_00870 0.35 -0.2 198,236 - IAI46_00870 0.35 +0.7 198,236 - IAI46_00870 0.35 -0.7 198,239 + IAI46_00870 0.36 -0.4 198,239 + IAI46_00870 0.36 -0.2 198,239 + IAI46_00870 0.36 -1.4 198,239 + IAI46_00870 0.36 +0.2 198,239 + IAI46_00870 0.36 -0.6 198,240 - IAI46_00870 0.36 -0.3 198,240 - IAI46_00870 0.36 -1.3 198,240 - IAI46_00870 0.36 +0.9 198,240 - IAI46_00870 0.36 -1.0 198,240 - IAI46_00870 0.36 -0.3 198,240 - IAI46_00870 0.36 +0.6 198,240 - IAI46_00870 0.36 -1.4 198,240 - IAI46_00870 0.36 +0.5 198,293 - IAI46_00870 0.44 +0.6 198,372 + IAI46_00870 0.57 -0.3 198,372 + IAI46_00870 0.57 +0.4 198,374 + IAI46_00870 0.57 +0.6 198,375 - IAI46_00870 0.57 +0.7 198,375 - IAI46_00870 0.57 +0.4 198,410 + IAI46_00870 0.63 -0.0 198,410 + IAI46_00870 0.63 +0.7 198,454 + IAI46_00870 0.70 -0.6 198,454 + IAI46_00870 0.70 +0.1
Or see this region's nucleotide sequence