Experiment: Gly-Glu (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt copA and ybaS are separated by 261 nucleotides ybaS and ybaT are separated by 2 nucleotides
b0484: copA - copper transporter (NCBI), at 508,099 to 510,603
copA
b0485: ybaS - predicted glutaminase (NCBI), at 510,865 to 511,797
ybaS
b0486: ybaT - predicted transporter (NCBI), at 511,800 to 513,092
ybaT
Position (kb) 510
511
512 Strain fitness (log2 ratio) -1
0
1 at 509.929 kb on + strand, within copA at 509.935 kb on + strand, within copA at 510.004 kb on - strand, within copA at 510.019 kb on + strand, within copA at 510.186 kb on + strand, within copA at 510.217 kb on - strand, within copA at 510.217 kb on - strand, within copA at 510.264 kb on - strand, within copA at 510.266 kb on + strand, within copA at 510.272 kb on + strand, within copA at 510.277 kb on + strand, within copA at 510.453 kb on + strand at 510.461 kb on - strand at 510.461 kb on - strand at 510.488 kb on + strand at 510.515 kb on - strand at 510.523 kb on - strand at 510.525 kb on + strand at 510.525 kb on + strand at 510.587 kb on - strand at 510.631 kb on - strand at 510.651 kb on - strand at 510.652 kb on - strand at 510.844 kb on + strand at 510.903 kb on + strand at 510.903 kb on + strand at 510.979 kb on - strand, within ybaS at 510.979 kb on - strand, within ybaS at 511.000 kb on - strand, within ybaS at 511.172 kb on + strand, within ybaS at 511.172 kb on + strand, within ybaS at 511.359 kb on + strand, within ybaS at 511.389 kb on - strand, within ybaS at 511.392 kb on - strand, within ybaS at 511.434 kb on + strand, within ybaS at 511.583 kb on + strand, within ybaS at 511.583 kb on + strand, within ybaS at 511.673 kb on + strand, within ybaS at 511.673 kb on + strand, within ybaS at 511.673 kb on + strand, within ybaS at 511.980 kb on + strand, within ybaT at 512.081 kb on + strand, within ybaT at 512.081 kb on + strand, within ybaT at 512.171 kb on + strand, within ybaT at 512.239 kb on - strand, within ybaT at 512.413 kb on - strand, within ybaT at 512.414 kb on - strand, within ybaT at 512.514 kb on - strand, within ybaT at 512.567 kb on - strand, within ybaT at 512.604 kb on + strand, within ybaT at 512.771 kb on + strand, within ybaT
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (N) remove 509,929 + copA b0484 0.73 -1.2 509,935 + copA b0484 0.73 -0.4 510,004 - copA b0484 0.76 -0.1 510,019 + copA b0484 0.77 +0.9 510,186 + copA b0484 0.83 -0.1 510,217 - copA b0484 0.85 -1.0 510,217 - copA b0484 0.85 -0.3 510,264 - copA b0484 0.86 +0.1 510,266 + copA b0484 0.87 -0.2 510,272 + copA b0484 0.87 -0.8 510,277 + copA b0484 0.87 -0.2 510,453 + -0.1 510,461 - -0.0 510,461 - -0.2 510,488 + -0.4 510,515 - -0.3 510,523 - -0.5 510,525 + +0.5 510,525 + +0.3 510,587 - -0.4 510,631 - +0.2 510,651 - -0.8 510,652 - +0.2 510,844 + +0.4 510,903 + +0.7 510,903 + -0.0 510,979 - ybaS b0485 0.12 +0.1 510,979 - ybaS b0485 0.12 +1.4 511,000 - ybaS b0485 0.14 -0.2 511,172 + ybaS b0485 0.33 +0.4 511,172 + ybaS b0485 0.33 -0.3 511,359 + ybaS b0485 0.53 +0.4 511,389 - ybaS b0485 0.56 +0.2 511,392 - ybaS b0485 0.56 +0.4 511,434 + ybaS b0485 0.61 -1.1 511,583 + ybaS b0485 0.77 -0.9 511,583 + ybaS b0485 0.77 +0.3 511,673 + ybaS b0485 0.87 -0.1 511,673 + ybaS b0485 0.87 +0.2 511,673 + ybaS b0485 0.87 -0.1 511,980 + ybaT b0486 0.14 -0.8 512,081 + ybaT b0486 0.22 -0.8 512,081 + ybaT b0486 0.22 +0.2 512,171 + ybaT b0486 0.29 +0.7 512,239 - ybaT b0486 0.34 +0.6 512,413 - ybaT b0486 0.47 -0.2 512,414 - ybaT b0486 0.47 +0.3 512,514 - ybaT b0486 0.55 +0.0 512,567 - ybaT b0486 0.59 +0.5 512,604 + ybaT b0486 0.62 +0.5 512,771 + ybaT b0486 0.75 +0.7
Or see this region's nucleotide sequence