Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_24765 and IAI46_24770 are separated by 1 nucleotides IAI46_24770 and IAI46_24775 are separated by 211 nucleotides
IAI46_24765: IAI46_24765 - glycosyltransferase family 9 protein, at 5,286,061 to 5,287,158
_24765
IAI46_24770: IAI46_24770 - polysaccharide deacetylase family protein, at 5,287,160 to 5,288,116
_24770
IAI46_24775: IAI46_24775 - putative lipopolysaccharide heptosyltransferase III, at 5,288,328 to 5,289,410
_24775
Position (kb) 5287
5288
5289 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5286.370 kb on + strand, within IAI46_24765 at 5286.371 kb on - strand, within IAI46_24765 at 5286.448 kb on + strand, within IAI46_24765 at 5286.449 kb on - strand, within IAI46_24765 at 5286.449 kb on - strand, within IAI46_24765 at 5286.553 kb on + strand, within IAI46_24765 at 5286.554 kb on - strand, within IAI46_24765 at 5286.558 kb on + strand, within IAI46_24765 at 5286.559 kb on - strand, within IAI46_24765 at 5286.559 kb on - strand, within IAI46_24765 at 5286.559 kb on - strand, within IAI46_24765 at 5286.559 kb on - strand, within IAI46_24765 at 5286.666 kb on + strand, within IAI46_24765 at 5286.666 kb on + strand, within IAI46_24765 at 5286.667 kb on - strand, within IAI46_24765 at 5286.678 kb on - strand, within IAI46_24765 at 5286.678 kb on - strand, within IAI46_24765 at 5286.678 kb on - strand, within IAI46_24765 at 5286.678 kb on - strand, within IAI46_24765 at 5286.680 kb on + strand, within IAI46_24765 at 5286.691 kb on - strand, within IAI46_24765 at 5286.691 kb on - strand, within IAI46_24765 at 5286.691 kb on - strand, within IAI46_24765 at 5286.692 kb on + strand, within IAI46_24765 at 5286.692 kb on + strand, within IAI46_24765 at 5286.692 kb on + strand, within IAI46_24765 at 5286.692 kb on + strand, within IAI46_24765 at 5286.692 kb on + strand, within IAI46_24765 at 5286.692 kb on + strand, within IAI46_24765 at 5286.693 kb on - strand, within IAI46_24765 at 5286.693 kb on - strand, within IAI46_24765 at 5286.693 kb on - strand, within IAI46_24765 at 5286.693 kb on - strand, within IAI46_24765 at 5286.734 kb on + strand, within IAI46_24765 at 5286.735 kb on - strand, within IAI46_24765 at 5286.735 kb on - strand, within IAI46_24765 at 5286.735 kb on - strand, within IAI46_24765 at 5286.735 kb on - strand, within IAI46_24765 at 5286.735 kb on - strand, within IAI46_24765 at 5286.747 kb on + strand, within IAI46_24765 at 5286.752 kb on + strand, within IAI46_24765 at 5286.752 kb on + strand, within IAI46_24765 at 5286.752 kb on + strand, within IAI46_24765 at 5286.781 kb on - strand, within IAI46_24765 at 5286.902 kb on + strand, within IAI46_24765 at 5286.902 kb on + strand, within IAI46_24765 at 5286.902 kb on + strand, within IAI46_24765 at 5286.903 kb on - strand, within IAI46_24765 at 5286.903 kb on - strand, within IAI46_24765 at 5286.951 kb on + strand, within IAI46_24765 at 5286.951 kb on + strand, within IAI46_24765 at 5286.952 kb on - strand, within IAI46_24765 at 5286.954 kb on + strand, within IAI46_24765 at 5286.954 kb on + strand, within IAI46_24765 at 5286.955 kb on - strand, within IAI46_24765 at 5286.955 kb on - strand, within IAI46_24765 at 5286.955 kb on - strand, within IAI46_24765 at 5286.955 kb on - strand, within IAI46_24765 at 5286.955 kb on - strand, within IAI46_24765 at 5286.955 kb on - strand, within IAI46_24765 at 5287.002 kb on + strand, within IAI46_24765 at 5287.003 kb on - strand, within IAI46_24765 at 5287.008 kb on + strand, within IAI46_24765 at 5287.008 kb on + strand, within IAI46_24765 at 5287.009 kb on - strand, within IAI46_24765 at 5287.009 kb on - strand, within IAI46_24765 at 5287.009 kb on - strand, within IAI46_24765 at 5287.009 kb on - strand, within IAI46_24765 at 5287.010 kb on - strand, within IAI46_24765 at 5287.034 kb on + strand, within IAI46_24765 at 5287.035 kb on - strand, within IAI46_24765 at 5287.045 kb on - strand, within IAI46_24765 at 5287.107 kb on + strand at 5287.108 kb on - strand at 5287.108 kb on - strand at 5287.110 kb on - strand at 5287.172 kb on - strand at 5287.207 kb on + strand at 5287.207 kb on + strand at 5287.238 kb on + strand at 5287.239 kb on - strand at 5287.450 kb on - strand, within IAI46_24770 at 5287.465 kb on + strand, within IAI46_24770 at 5287.466 kb on - strand, within IAI46_24770 at 5287.486 kb on + strand, within IAI46_24770 at 5287.486 kb on + strand, within IAI46_24770 at 5287.488 kb on + strand, within IAI46_24770 at 5287.489 kb on - strand, within IAI46_24770 at 5287.623 kb on + strand, within IAI46_24770 at 5287.624 kb on - strand, within IAI46_24770 at 5287.665 kb on + strand, within IAI46_24770 at 5287.671 kb on + strand, within IAI46_24770 at 5287.672 kb on - strand, within IAI46_24770 at 5287.672 kb on - strand, within IAI46_24770 at 5287.692 kb on + strand, within IAI46_24770 at 5287.692 kb on + strand, within IAI46_24770 at 5287.693 kb on - strand, within IAI46_24770 at 5287.693 kb on - strand, within IAI46_24770 at 5287.693 kb on - strand, within IAI46_24770 at 5287.693 kb on - strand, within IAI46_24770 at 5287.693 kb on - strand, within IAI46_24770 at 5287.695 kb on + strand, within IAI46_24770 at 5287.695 kb on + strand, within IAI46_24770 at 5287.807 kb on - strand, within IAI46_24770 at 5287.939 kb on - strand, within IAI46_24770 at 5287.962 kb on + strand, within IAI46_24770 at 5287.963 kb on - strand, within IAI46_24770 at 5287.963 kb on - strand, within IAI46_24770 at 5287.984 kb on + strand, within IAI46_24770 at 5287.993 kb on - strand, within IAI46_24770 at 5288.117 kb on - strand at 5288.132 kb on + strand at 5288.133 kb on - strand at 5288.133 kb on - strand at 5288.133 kb on - strand at 5288.149 kb on - strand at 5288.154 kb on - strand at 5288.185 kb on + strand at 5288.185 kb on + strand at 5288.186 kb on - strand at 5288.186 kb on - strand at 5288.186 kb on - strand at 5288.360 kb on + strand at 5288.360 kb on + strand at 5288.368 kb on + strand at 5288.375 kb on + strand at 5288.435 kb on + strand at 5288.435 kb on + strand at 5288.474 kb on - strand, within IAI46_24775 at 5288.474 kb on - strand, within IAI46_24775 at 5288.483 kb on + strand, within IAI46_24775 at 5288.609 kb on + strand, within IAI46_24775 at 5288.609 kb on + strand, within IAI46_24775 at 5288.609 kb on + strand, within IAI46_24775 at 5288.609 kb on + strand, within IAI46_24775 at 5288.609 kb on + strand, within IAI46_24775 at 5288.690 kb on + strand, within IAI46_24775 at 5288.691 kb on - strand, within IAI46_24775 at 5288.731 kb on + strand, within IAI46_24775 at 5288.859 kb on + strand, within IAI46_24775 at 5288.922 kb on + strand, within IAI46_24775 at 5289.100 kb on + strand, within IAI46_24775 at 5289.100 kb on + strand, within IAI46_24775 at 5289.100 kb on + strand, within IAI46_24775
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 5,286,370 + IAI46_24765 0.28 -1.2 5,286,371 - IAI46_24765 0.28 -0.4 5,286,448 + IAI46_24765 0.35 +0.4 5,286,449 - IAI46_24765 0.35 -1.1 5,286,449 - IAI46_24765 0.35 -0.3 5,286,553 + IAI46_24765 0.45 +0.2 5,286,554 - IAI46_24765 0.45 -0.1 5,286,558 + IAI46_24765 0.45 -0.2 5,286,559 - IAI46_24765 0.45 +0.5 5,286,559 - IAI46_24765 0.45 +0.3 5,286,559 - IAI46_24765 0.45 +0.1 5,286,559 - IAI46_24765 0.45 -1.2 5,286,666 + IAI46_24765 0.55 +0.3 5,286,666 + IAI46_24765 0.55 +0.0 5,286,667 - IAI46_24765 0.55 +1.1 5,286,678 - IAI46_24765 0.56 -0.5 5,286,678 - IAI46_24765 0.56 +0.3 5,286,678 - IAI46_24765 0.56 -0.5 5,286,678 - IAI46_24765 0.56 +0.6 5,286,680 + IAI46_24765 0.56 -0.0 5,286,691 - IAI46_24765 0.57 -0.6 5,286,691 - IAI46_24765 0.57 +0.7 5,286,691 - IAI46_24765 0.57 -2.6 5,286,692 + IAI46_24765 0.57 -0.2 5,286,692 + IAI46_24765 0.57 -0.3 5,286,692 + IAI46_24765 0.57 +0.2 5,286,692 + IAI46_24765 0.57 -0.3 5,286,692 + IAI46_24765 0.57 -0.4 5,286,692 + IAI46_24765 0.57 +0.4 5,286,693 - IAI46_24765 0.58 +0.7 5,286,693 - IAI46_24765 0.58 +0.0 5,286,693 - IAI46_24765 0.58 +0.9 5,286,693 - IAI46_24765 0.58 +0.4 5,286,734 + IAI46_24765 0.61 +0.1 5,286,735 - IAI46_24765 0.61 +0.9 5,286,735 - IAI46_24765 0.61 -1.0 5,286,735 - IAI46_24765 0.61 -0.4 5,286,735 - IAI46_24765 0.61 -0.2 5,286,735 - IAI46_24765 0.61 -0.3 5,286,747 + IAI46_24765 0.62 -1.2 5,286,752 + IAI46_24765 0.63 -0.5 5,286,752 + IAI46_24765 0.63 +0.1 5,286,752 + IAI46_24765 0.63 +0.3 5,286,781 - IAI46_24765 0.66 +0.5 5,286,902 + IAI46_24765 0.77 -2.5 5,286,902 + IAI46_24765 0.77 -0.4 5,286,902 + IAI46_24765 0.77 -1.0 5,286,903 - IAI46_24765 0.77 +0.7 5,286,903 - IAI46_24765 0.77 +0.3 5,286,951 + IAI46_24765 0.81 +0.1 5,286,951 + IAI46_24765 0.81 -1.3 5,286,952 - IAI46_24765 0.81 +0.4 5,286,954 + IAI46_24765 0.81 -1.3 5,286,954 + IAI46_24765 0.81 +0.3 5,286,955 - IAI46_24765 0.81 -0.6 5,286,955 - IAI46_24765 0.81 +0.5 5,286,955 - IAI46_24765 0.81 -0.1 5,286,955 - IAI46_24765 0.81 -0.2 5,286,955 - IAI46_24765 0.81 -1.4 5,286,955 - IAI46_24765 0.81 -0.4 5,287,002 + IAI46_24765 0.86 +0.5 5,287,003 - IAI46_24765 0.86 -2.5 5,287,008 + IAI46_24765 0.86 +0.7 5,287,008 + IAI46_24765 0.86 -0.3 5,287,009 - IAI46_24765 0.86 -1.2 5,287,009 - IAI46_24765 0.86 -0.2 5,287,009 - IAI46_24765 0.86 +0.9 5,287,009 - IAI46_24765 0.86 +0.2 5,287,010 - IAI46_24765 0.86 +1.3 5,287,034 + IAI46_24765 0.89 -0.1 5,287,035 - IAI46_24765 0.89 -0.0 5,287,045 - IAI46_24765 0.90 +0.6 5,287,107 + -0.6 5,287,108 - -0.2 5,287,108 - +0.1 5,287,110 - -0.4 5,287,172 - -0.3 5,287,207 + -0.5 5,287,207 + -0.5 5,287,238 + -0.0 5,287,239 - +0.3 5,287,450 - IAI46_24770 0.30 -0.0 5,287,465 + IAI46_24770 0.32 -0.5 5,287,466 - IAI46_24770 0.32 +0.6 5,287,486 + IAI46_24770 0.34 +0.3 5,287,486 + IAI46_24770 0.34 -0.9 5,287,488 + IAI46_24770 0.34 -0.0 5,287,489 - IAI46_24770 0.34 -0.0 5,287,623 + IAI46_24770 0.48 -0.9 5,287,624 - IAI46_24770 0.48 +1.8 5,287,665 + IAI46_24770 0.53 -0.5 5,287,671 + IAI46_24770 0.53 -0.0 5,287,672 - IAI46_24770 0.54 +2.9 5,287,672 - IAI46_24770 0.54 -0.8 5,287,692 + IAI46_24770 0.56 +0.5 5,287,692 + IAI46_24770 0.56 +0.3 5,287,693 - IAI46_24770 0.56 -1.7 5,287,693 - IAI46_24770 0.56 +1.0 5,287,693 - IAI46_24770 0.56 +1.3 5,287,693 - IAI46_24770 0.56 -0.5 5,287,693 - IAI46_24770 0.56 +1.7 5,287,695 + IAI46_24770 0.56 +1.4 5,287,695 + IAI46_24770 0.56 -0.0 5,287,807 - IAI46_24770 0.68 -0.7 5,287,939 - IAI46_24770 0.81 +0.7 5,287,962 + IAI46_24770 0.84 +0.3 5,287,963 - IAI46_24770 0.84 +1.3 5,287,963 - IAI46_24770 0.84 +1.1 5,287,984 + IAI46_24770 0.86 +0.7 5,287,993 - IAI46_24770 0.87 +1.6 5,288,117 - -1.4 5,288,132 + +1.1 5,288,133 - +1.5 5,288,133 - -0.3 5,288,133 - -0.6 5,288,149 - -0.3 5,288,154 - +0.6 5,288,185 + -0.2 5,288,185 + +0.1 5,288,186 - -0.3 5,288,186 - -0.6 5,288,186 - +0.2 5,288,360 + +0.3 5,288,360 + +0.1 5,288,368 + -0.4 5,288,375 + +0.4 5,288,435 + -0.8 5,288,435 + +1.1 5,288,474 - IAI46_24775 0.13 +0.3 5,288,474 - IAI46_24775 0.13 -0.7 5,288,483 + IAI46_24775 0.14 -1.2 5,288,609 + IAI46_24775 0.26 +0.0 5,288,609 + IAI46_24775 0.26 +0.3 5,288,609 + IAI46_24775 0.26 -1.3 5,288,609 + IAI46_24775 0.26 +1.5 5,288,609 + IAI46_24775 0.26 -1.2 5,288,690 + IAI46_24775 0.33 +0.2 5,288,691 - IAI46_24775 0.34 +1.0 5,288,731 + IAI46_24775 0.37 -0.3 5,288,859 + IAI46_24775 0.49 +0.3 5,288,922 + IAI46_24775 0.55 +0.7 5,289,100 + IAI46_24775 0.71 +0.5 5,289,100 + IAI46_24775 0.71 -0.5 5,289,100 + IAI46_24775 0.71 +0.5
Or see this region's nucleotide sequence