Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_22860 and IAI46_22865 are separated by 128 nucleotides IAI46_22865 and IAI46_22870 are separated by 354 nucleotides
IAI46_22860: IAI46_22860 - LysR family transcriptional regulator, at 4,870,957 to 4,871,874
_22860
IAI46_22865: IAI46_22865 - 3-oxoacyl-ACP reductase FabG, at 4,872,003 to 4,872,752
_22865
IAI46_22870: IAI46_22870 - hypothetical protein, at 4,873,107 to 4,874,981
_22870
Position (kb)
4872
4873 Strain fitness (log2 ratio)
-1
0
1 at 4871.063 kb on + strand, within IAI46_22860 at 4871.063 kb on + strand, within IAI46_22860 at 4871.064 kb on - strand, within IAI46_22860 at 4871.090 kb on + strand, within IAI46_22860 at 4871.090 kb on + strand, within IAI46_22860 at 4871.090 kb on + strand, within IAI46_22860 at 4871.090 kb on + strand, within IAI46_22860 at 4871.090 kb on + strand, within IAI46_22860 at 4871.091 kb on - strand, within IAI46_22860 at 4871.091 kb on - strand, within IAI46_22860 at 4871.132 kb on + strand, within IAI46_22860 at 4871.133 kb on - strand, within IAI46_22860 at 4871.213 kb on - strand, within IAI46_22860 at 4871.213 kb on - strand, within IAI46_22860 at 4871.262 kb on + strand, within IAI46_22860 at 4871.262 kb on + strand, within IAI46_22860 at 4871.263 kb on - strand, within IAI46_22860 at 4871.263 kb on - strand, within IAI46_22860 at 4871.263 kb on - strand, within IAI46_22860 at 4871.263 kb on - strand, within IAI46_22860 at 4871.263 kb on - strand, within IAI46_22860 at 4871.369 kb on + strand, within IAI46_22860 at 4871.632 kb on + strand, within IAI46_22860 at 4871.633 kb on - strand, within IAI46_22860 at 4871.633 kb on - strand, within IAI46_22860 at 4871.633 kb on - strand, within IAI46_22860 at 4871.906 kb on + strand at 4871.916 kb on - strand at 4871.956 kb on + strand at 4871.957 kb on - strand at 4872.042 kb on - strand at 4872.109 kb on + strand, within IAI46_22865 at 4872.121 kb on - strand, within IAI46_22865 at 4872.235 kb on + strand, within IAI46_22865 at 4872.367 kb on + strand, within IAI46_22865 at 4872.367 kb on + strand, within IAI46_22865 at 4872.368 kb on - strand, within IAI46_22865 at 4872.398 kb on + strand, within IAI46_22865 at 4872.399 kb on - strand, within IAI46_22865 at 4872.425 kb on + strand, within IAI46_22865 at 4872.475 kb on - strand, within IAI46_22865 at 4872.555 kb on - strand, within IAI46_22865 at 4872.619 kb on + strand, within IAI46_22865 at 4872.620 kb on - strand, within IAI46_22865 at 4872.705 kb on + strand at 4872.706 kb on - strand at 4872.706 kb on - strand at 4872.706 kb on - strand at 4872.706 kb on - strand at 4872.708 kb on - strand at 4872.708 kb on - strand at 4872.857 kb on + strand at 4872.886 kb on + strand at 4872.915 kb on + strand at 4872.915 kb on + strand at 4872.915 kb on + strand at 4872.939 kb on + strand at 4872.939 kb on + strand at 4872.939 kb on + strand at 4872.940 kb on - strand at 4872.940 kb on - strand at 4873.018 kb on + strand at 4873.018 kb on + strand at 4873.018 kb on + strand at 4873.019 kb on - strand at 4873.036 kb on + strand at 4873.037 kb on - strand at 4873.038 kb on + strand at 4873.039 kb on - strand at 4873.039 kb on - strand at 4873.109 kb on - strand at 4873.128 kb on - strand at 4873.131 kb on + strand at 4873.132 kb on - strand at 4873.132 kb on - strand at 4873.178 kb on + strand at 4873.348 kb on - strand, within IAI46_22870 at 4873.368 kb on + strand, within IAI46_22870 at 4873.369 kb on - strand, within IAI46_22870 at 4873.377 kb on + strand, within IAI46_22870 at 4873.418 kb on + strand, within IAI46_22870 at 4873.419 kb on - strand, within IAI46_22870 at 4873.503 kb on + strand, within IAI46_22870 at 4873.507 kb on - strand, within IAI46_22870 at 4873.585 kb on - strand, within IAI46_22870 at 4873.714 kb on - strand, within IAI46_22870
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 4,871,063 + IAI46_22860 0.12 -0.3 4,871,063 + IAI46_22860 0.12 -0.3 4,871,064 - IAI46_22860 0.12 +0.3 4,871,090 + IAI46_22860 0.14 -0.2 4,871,090 + IAI46_22860 0.14 +0.6 4,871,090 + IAI46_22860 0.14 -1.4 4,871,090 + IAI46_22860 0.14 +1.4 4,871,090 + IAI46_22860 0.14 +0.8 4,871,091 - IAI46_22860 0.15 +1.0 4,871,091 - IAI46_22860 0.15 +0.8 4,871,132 + IAI46_22860 0.19 +0.6 4,871,133 - IAI46_22860 0.19 +0.7 4,871,213 - IAI46_22860 0.28 -1.5 4,871,213 - IAI46_22860 0.28 +0.0 4,871,262 + IAI46_22860 0.33 -0.2 4,871,262 + IAI46_22860 0.33 +0.8 4,871,263 - IAI46_22860 0.33 -0.9 4,871,263 - IAI46_22860 0.33 +0.9 4,871,263 - IAI46_22860 0.33 +0.1 4,871,263 - IAI46_22860 0.33 +0.1 4,871,263 - IAI46_22860 0.33 -0.9 4,871,369 + IAI46_22860 0.45 +0.1 4,871,632 + IAI46_22860 0.74 +0.5 4,871,633 - IAI46_22860 0.74 +0.3 4,871,633 - IAI46_22860 0.74 -0.2 4,871,633 - IAI46_22860 0.74 +0.5 4,871,906 + -0.6 4,871,916 - +0.4 4,871,956 + -1.1 4,871,957 - +0.4 4,872,042 - +0.1 4,872,109 + IAI46_22865 0.14 +0.2 4,872,121 - IAI46_22865 0.16 -0.3 4,872,235 + IAI46_22865 0.31 +1.4 4,872,367 + IAI46_22865 0.49 +0.5 4,872,367 + IAI46_22865 0.49 +0.4 4,872,368 - IAI46_22865 0.49 +1.0 4,872,398 + IAI46_22865 0.53 +0.8 4,872,399 - IAI46_22865 0.53 +0.3 4,872,425 + IAI46_22865 0.56 +0.5 4,872,475 - IAI46_22865 0.63 +0.5 4,872,555 - IAI46_22865 0.74 -0.1 4,872,619 + IAI46_22865 0.82 -0.1 4,872,620 - IAI46_22865 0.82 +0.6 4,872,705 + +0.3 4,872,706 - -1.0 4,872,706 - +0.0 4,872,706 - -0.3 4,872,706 - +1.4 4,872,708 - +0.6 4,872,708 - +1.0 4,872,857 + +1.5 4,872,886 + -1.0 4,872,915 + -0.7 4,872,915 + -0.2 4,872,915 + +0.5 4,872,939 + +1.1 4,872,939 + -0.1 4,872,939 + +0.9 4,872,940 - +0.6 4,872,940 - +0.6 4,873,018 + +0.4 4,873,018 + +0.0 4,873,018 + +0.3 4,873,019 - +0.6 4,873,036 + +0.1 4,873,037 - -0.5 4,873,038 + +0.0 4,873,039 - +1.3 4,873,039 - +0.9 4,873,109 - -0.6 4,873,128 - +0.7 4,873,131 + -0.8 4,873,132 - -0.1 4,873,132 - +1.2 4,873,178 + +1.5 4,873,348 - IAI46_22870 0.13 +0.7 4,873,368 + IAI46_22870 0.14 -0.8 4,873,369 - IAI46_22870 0.14 -0.5 4,873,377 + IAI46_22870 0.14 -0.2 4,873,418 + IAI46_22870 0.17 -0.2 4,873,419 - IAI46_22870 0.17 -0.1 4,873,503 + IAI46_22870 0.21 +1.2 4,873,507 - IAI46_22870 0.21 -0.7 4,873,585 - IAI46_22870 0.25 +0.9 4,873,714 - IAI46_22870 0.32 +0.4
Or see this region's nucleotide sequence