Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_22635 and IAI46_22640 are separated by 144 nucleotides IAI46_22640 and IAI46_22645 overlap by 1 nucleotides IAI46_22645 and IAI46_22650 are separated by 81 nucleotides IAI46_22650 and IAI46_22655 overlap by 4 nucleotides
IAI46_22635: IAI46_22635 - nucleoside hydrolase, at 4,809,453 to 4,810,397
_22635
IAI46_22640: IAI46_22640 - hypothetical protein, at 4,810,542 to 4,811,081
_22640
IAI46_22645: IAI46_22645 - pretoxin, at 4,811,081 to 4,811,365
_22645
IAI46_22650: IAI46_22650 - hypothetical protein, at 4,811,447 to 4,811,812
_22650
IAI46_22655: IAI46_22655 - hypothetical protein, at 4,811,809 to 4,812,090
_22655
Position (kb)
4810
4811
4812 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4809.773 kb on + strand, within IAI46_22635 at 4809.840 kb on - strand, within IAI46_22635 at 4809.858 kb on - strand, within IAI46_22635 at 4809.986 kb on + strand, within IAI46_22635 at 4809.987 kb on - strand, within IAI46_22635 at 4810.132 kb on - strand, within IAI46_22635 at 4810.189 kb on - strand, within IAI46_22635 at 4810.232 kb on - strand, within IAI46_22635 at 4810.236 kb on - strand, within IAI46_22635 at 4810.310 kb on + strand at 4810.310 kb on + strand at 4810.319 kb on - strand at 4810.319 kb on - strand at 4810.324 kb on + strand at 4810.369 kb on + strand at 4810.395 kb on + strand at 4810.395 kb on + strand at 4810.395 kb on + strand at 4810.422 kb on - strand at 4810.506 kb on + strand at 4810.517 kb on - strand at 4810.540 kb on - strand at 4810.550 kb on + strand at 4810.570 kb on - strand at 4810.713 kb on + strand, within IAI46_22640 at 4810.714 kb on - strand, within IAI46_22640 at 4810.715 kb on + strand, within IAI46_22640 at 4810.717 kb on + strand, within IAI46_22640 at 4810.719 kb on + strand, within IAI46_22640 at 4810.868 kb on + strand, within IAI46_22640 at 4811.000 kb on + strand, within IAI46_22640 at 4811.086 kb on + strand at 4811.088 kb on + strand at 4811.138 kb on + strand, within IAI46_22645 at 4811.251 kb on + strand, within IAI46_22645 at 4811.251 kb on + strand, within IAI46_22645 at 4811.252 kb on - strand, within IAI46_22645 at 4811.254 kb on + strand, within IAI46_22645 at 4811.255 kb on - strand, within IAI46_22645 at 4811.255 kb on - strand, within IAI46_22645 at 4811.281 kb on - strand, within IAI46_22645 at 4811.290 kb on + strand, within IAI46_22645 at 4811.291 kb on - strand, within IAI46_22645 at 4811.299 kb on + strand, within IAI46_22645 at 4811.299 kb on + strand, within IAI46_22645 at 4811.320 kb on + strand, within IAI46_22645 at 4811.320 kb on + strand, within IAI46_22645 at 4811.321 kb on - strand, within IAI46_22645 at 4811.321 kb on - strand, within IAI46_22645 at 4811.339 kb on + strand at 4811.340 kb on - strand at 4811.401 kb on - strand at 4811.417 kb on - strand at 4811.448 kb on + strand at 4811.452 kb on + strand at 4811.453 kb on - strand at 4811.453 kb on - strand at 4811.460 kb on + strand at 4811.461 kb on - strand at 4811.464 kb on + strand at 4811.467 kb on - strand at 4811.467 kb on - strand at 4811.467 kb on - strand at 4811.467 kb on - strand at 4811.467 kb on - strand at 4811.495 kb on + strand, within IAI46_22650 at 4811.542 kb on + strand, within IAI46_22650 at 4811.577 kb on + strand, within IAI46_22650 at 4811.577 kb on + strand, within IAI46_22650 at 4811.578 kb on - strand, within IAI46_22650 at 4811.587 kb on + strand, within IAI46_22650 at 4811.587 kb on + strand, within IAI46_22650 at 4811.588 kb on - strand, within IAI46_22650 at 4811.594 kb on + strand, within IAI46_22650 at 4811.595 kb on - strand, within IAI46_22650 at 4811.643 kb on - strand, within IAI46_22650 at 4811.653 kb on + strand, within IAI46_22650 at 4811.654 kb on - strand, within IAI46_22650 at 4811.663 kb on - strand, within IAI46_22650 at 4811.666 kb on + strand, within IAI46_22650 at 4811.667 kb on - strand, within IAI46_22650 at 4811.701 kb on + strand, within IAI46_22650 at 4811.702 kb on - strand, within IAI46_22650 at 4811.753 kb on + strand, within IAI46_22650 at 4811.878 kb on - strand, within IAI46_22655 at 4811.980 kb on - strand, within IAI46_22655 at 4811.997 kb on + strand, within IAI46_22655 at 4812.000 kb on - strand, within IAI46_22655 at 4812.018 kb on - strand, within IAI46_22655 at 4812.019 kb on + strand, within IAI46_22655 at 4812.020 kb on - strand, within IAI46_22655 at 4812.020 kb on - strand, within IAI46_22655 at 4812.049 kb on - strand, within IAI46_22655
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 4,809,773 + IAI46_22635 0.34 +0.6 4,809,840 - IAI46_22635 0.41 +0.3 4,809,858 - IAI46_22635 0.43 -0.2 4,809,986 + IAI46_22635 0.56 -0.9 4,809,987 - IAI46_22635 0.57 +1.6 4,810,132 - IAI46_22635 0.72 +0.5 4,810,189 - IAI46_22635 0.78 -0.9 4,810,232 - IAI46_22635 0.82 +0.8 4,810,236 - IAI46_22635 0.83 -0.3 4,810,310 + -1.3 4,810,310 + -0.6 4,810,319 - -1.1 4,810,319 - +0.3 4,810,324 + -0.0 4,810,369 + -0.8 4,810,395 + +0.2 4,810,395 + -0.1 4,810,395 + -0.3 4,810,422 - +2.0 4,810,506 + -1.0 4,810,517 - -0.2 4,810,540 - +0.6 4,810,550 + -0.3 4,810,570 - +0.4 4,810,713 + IAI46_22640 0.32 +0.3 4,810,714 - IAI46_22640 0.32 -0.2 4,810,715 + IAI46_22640 0.32 +0.2 4,810,717 + IAI46_22640 0.32 -1.8 4,810,719 + IAI46_22640 0.33 -1.3 4,810,868 + IAI46_22640 0.60 -1.4 4,811,000 + IAI46_22640 0.85 +0.9 4,811,086 + +0.3 4,811,088 + +0.7 4,811,138 + IAI46_22645 0.20 +0.6 4,811,251 + IAI46_22645 0.60 -0.3 4,811,251 + IAI46_22645 0.60 +0.6 4,811,252 - IAI46_22645 0.60 -1.5 4,811,254 + IAI46_22645 0.61 +0.7 4,811,255 - IAI46_22645 0.61 -0.8 4,811,255 - IAI46_22645 0.61 +0.2 4,811,281 - IAI46_22645 0.70 +0.2 4,811,290 + IAI46_22645 0.73 +1.0 4,811,291 - IAI46_22645 0.74 -0.3 4,811,299 + IAI46_22645 0.76 -0.7 4,811,299 + IAI46_22645 0.76 +0.2 4,811,320 + IAI46_22645 0.84 +0.4 4,811,320 + IAI46_22645 0.84 -0.5 4,811,321 - IAI46_22645 0.84 +0.0 4,811,321 - IAI46_22645 0.84 +0.4 4,811,339 + -1.0 4,811,340 - +0.5 4,811,401 - -0.5 4,811,417 - -0.0 4,811,448 + -0.6 4,811,452 + -1.3 4,811,453 - -0.1 4,811,453 - -0.1 4,811,460 + -1.6 4,811,461 - +0.2 4,811,464 + -0.1 4,811,467 - +0.3 4,811,467 - -0.2 4,811,467 - +0.1 4,811,467 - -0.2 4,811,467 - +0.1 4,811,495 + IAI46_22650 0.13 +1.5 4,811,542 + IAI46_22650 0.26 +0.7 4,811,577 + IAI46_22650 0.36 +0.4 4,811,577 + IAI46_22650 0.36 +0.3 4,811,578 - IAI46_22650 0.36 +0.9 4,811,587 + IAI46_22650 0.38 -0.8 4,811,587 + IAI46_22650 0.38 -0.4 4,811,588 - IAI46_22650 0.39 +0.3 4,811,594 + IAI46_22650 0.40 +0.6 4,811,595 - IAI46_22650 0.40 +0.2 4,811,643 - IAI46_22650 0.54 +1.5 4,811,653 + IAI46_22650 0.56 -1.4 4,811,654 - IAI46_22650 0.57 +0.4 4,811,663 - IAI46_22650 0.59 +0.8 4,811,666 + IAI46_22650 0.60 +1.9 4,811,667 - IAI46_22650 0.60 -0.1 4,811,701 + IAI46_22650 0.69 +0.2 4,811,702 - IAI46_22650 0.70 +1.5 4,811,753 + IAI46_22650 0.84 +0.7 4,811,878 - IAI46_22655 0.24 -0.1 4,811,980 - IAI46_22655 0.61 -0.8 4,811,997 + IAI46_22655 0.67 +1.1 4,812,000 - IAI46_22655 0.68 +0.3 4,812,018 - IAI46_22655 0.74 -0.3 4,812,019 + IAI46_22655 0.74 -0.5 4,812,020 - IAI46_22655 0.75 -0.2 4,812,020 - IAI46_22655 0.75 -0.4 4,812,049 - IAI46_22655 0.85 +0.7
Or see this region's nucleotide sequence