Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_19455 and IAI46_19460 are separated by 128 nucleotides IAI46_19460 and IAI46_19465 overlap by 4 nucleotides IAI46_19465 and IAI46_19470 are separated by 2 nucleotides
IAI46_19455: IAI46_19455 - NAD+ synthase, at 4,107,907 to 4,109,529
_19455
IAI46_19460: IAI46_19460 - two-component system response regulator GlrR, at 4,109,658 to 4,110,995
_19460
IAI46_19465: IAI46_19465 - two-component system QseEF-associated lipoprotein QseG, at 4,110,992 to 4,111,864
_19465
IAI46_19470: IAI46_19470 - HAMP domain-containing histidine kinase, at 4,111,867 to 4,113,303
_19470
Position (kb)
4109
4110
4111 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4109.547 kb on - strand at 4109.547 kb on - strand at 4109.550 kb on - strand at 4109.550 kb on - strand at 4109.602 kb on - strand at 4109.757 kb on - strand at 4109.788 kb on + strand at 4109.788 kb on + strand at 4109.788 kb on + strand at 4109.788 kb on + strand at 4109.807 kb on + strand, within IAI46_19460 at 4109.807 kb on + strand, within IAI46_19460 at 4109.808 kb on - strand, within IAI46_19460 at 4109.880 kb on - strand, within IAI46_19460 at 4110.054 kb on - strand, within IAI46_19460 at 4110.112 kb on + strand, within IAI46_19460 at 4110.113 kb on - strand, within IAI46_19460 at 4110.176 kb on + strand, within IAI46_19460 at 4110.183 kb on + strand, within IAI46_19460 at 4110.183 kb on + strand, within IAI46_19460 at 4110.184 kb on - strand, within IAI46_19460 at 4110.184 kb on - strand, within IAI46_19460 at 4110.275 kb on + strand, within IAI46_19460 at 4110.420 kb on - strand, within IAI46_19460 at 4110.420 kb on - strand, within IAI46_19460 at 4110.497 kb on + strand, within IAI46_19460 at 4110.567 kb on - strand, within IAI46_19460 at 4110.587 kb on + strand, within IAI46_19460 at 4110.652 kb on + strand, within IAI46_19460 at 4110.653 kb on - strand, within IAI46_19460 at 4110.868 kb on - strand at 4111.013 kb on - strand at 4111.013 kb on - strand at 4111.015 kb on + strand at 4111.015 kb on + strand at 4111.032 kb on + strand at 4111.032 kb on + strand at 4111.032 kb on + strand at 4111.033 kb on - strand at 4111.033 kb on - strand at 4111.036 kb on + strand at 4111.037 kb on - strand at 4111.153 kb on + strand, within IAI46_19465 at 4111.253 kb on + strand, within IAI46_19465 at 4111.259 kb on + strand, within IAI46_19465 at 4111.259 kb on + strand, within IAI46_19465 at 4111.260 kb on - strand, within IAI46_19465 at 4111.260 kb on - strand, within IAI46_19465 at 4111.260 kb on - strand, within IAI46_19465 at 4111.275 kb on - strand, within IAI46_19465 at 4111.283 kb on + strand, within IAI46_19465 at 4111.284 kb on - strand, within IAI46_19465 at 4111.284 kb on - strand, within IAI46_19465 at 4111.284 kb on - strand, within IAI46_19465 at 4111.353 kb on - strand, within IAI46_19465 at 4111.353 kb on - strand, within IAI46_19465 at 4111.414 kb on - strand, within IAI46_19465 at 4111.414 kb on - strand, within IAI46_19465 at 4111.433 kb on + strand, within IAI46_19465 at 4111.434 kb on - strand, within IAI46_19465 at 4111.555 kb on + strand, within IAI46_19465 at 4111.588 kb on - strand, within IAI46_19465 at 4111.588 kb on - strand, within IAI46_19465 at 4111.612 kb on + strand, within IAI46_19465 at 4111.612 kb on + strand, within IAI46_19465 at 4111.613 kb on - strand, within IAI46_19465 at 4111.860 kb on + strand at 4111.860 kb on + strand at 4111.860 kb on + strand at 4111.861 kb on - strand at 4111.861 kb on - strand at 4111.861 kb on - strand at 4111.861 kb on - strand at 4111.861 kb on - strand at 4111.861 kb on - strand at 4111.865 kb on + strand at 4111.865 kb on + strand at 4111.865 kb on + strand at 4111.866 kb on - strand at 4111.866 kb on - strand at 4111.866 kb on - strand at 4111.866 kb on - strand at 4111.866 kb on - strand at 4111.868 kb on + strand at 4111.868 kb on + strand at 4111.869 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 4,109,547 - -0.3 4,109,547 - +0.1 4,109,550 - +0.0 4,109,550 - -0.2 4,109,602 - +0.9 4,109,757 - -0.2 4,109,788 + +0.1 4,109,788 + +0.7 4,109,788 + -0.3 4,109,788 + -0.0 4,109,807 + IAI46_19460 0.11 -0.2 4,109,807 + IAI46_19460 0.11 -2.2 4,109,808 - IAI46_19460 0.11 -0.3 4,109,880 - IAI46_19460 0.17 +0.8 4,110,054 - IAI46_19460 0.30 +1.3 4,110,112 + IAI46_19460 0.34 +0.2 4,110,113 - IAI46_19460 0.34 -0.2 4,110,176 + IAI46_19460 0.39 -1.7 4,110,183 + IAI46_19460 0.39 +0.7 4,110,183 + IAI46_19460 0.39 +0.3 4,110,184 - IAI46_19460 0.39 -1.7 4,110,184 - IAI46_19460 0.39 +0.3 4,110,275 + IAI46_19460 0.46 +0.9 4,110,420 - IAI46_19460 0.57 -0.9 4,110,420 - IAI46_19460 0.57 +0.0 4,110,497 + IAI46_19460 0.63 +1.4 4,110,567 - IAI46_19460 0.68 -1.6 4,110,587 + IAI46_19460 0.69 -1.2 4,110,652 + IAI46_19460 0.74 +0.9 4,110,653 - IAI46_19460 0.74 +0.1 4,110,868 - -1.0 4,111,013 - +0.1 4,111,013 - -0.5 4,111,015 + +0.9 4,111,015 + +0.6 4,111,032 + +0.4 4,111,032 + +0.2 4,111,032 + +0.2 4,111,033 - +1.0 4,111,033 - +0.7 4,111,036 + -0.7 4,111,037 - -1.7 4,111,153 + IAI46_19465 0.18 +0.0 4,111,253 + IAI46_19465 0.30 +0.1 4,111,259 + IAI46_19465 0.31 +0.6 4,111,259 + IAI46_19465 0.31 +0.4 4,111,260 - IAI46_19465 0.31 -0.5 4,111,260 - IAI46_19465 0.31 +0.5 4,111,260 - IAI46_19465 0.31 -0.1 4,111,275 - IAI46_19465 0.32 -0.8 4,111,283 + IAI46_19465 0.33 -1.4 4,111,284 - IAI46_19465 0.33 +1.0 4,111,284 - IAI46_19465 0.33 -0.8 4,111,284 - IAI46_19465 0.33 -0.4 4,111,353 - IAI46_19465 0.41 +0.0 4,111,353 - IAI46_19465 0.41 +0.0 4,111,414 - IAI46_19465 0.48 +0.4 4,111,414 - IAI46_19465 0.48 -0.7 4,111,433 + IAI46_19465 0.51 +0.7 4,111,434 - IAI46_19465 0.51 -0.6 4,111,555 + IAI46_19465 0.64 -0.8 4,111,588 - IAI46_19465 0.68 +0.0 4,111,588 - IAI46_19465 0.68 +0.1 4,111,612 + IAI46_19465 0.71 +0.5 4,111,612 + IAI46_19465 0.71 +0.7 4,111,613 - IAI46_19465 0.71 +0.2 4,111,860 + -1.0 4,111,860 + -0.4 4,111,860 + -0.1 4,111,861 - +0.7 4,111,861 - -0.7 4,111,861 - -0.1 4,111,861 - -0.9 4,111,861 - +0.4 4,111,861 - -0.9 4,111,865 + +0.3 4,111,865 + +1.8 4,111,865 + -1.0 4,111,866 - -0.1 4,111,866 - +0.9 4,111,866 - +0.6 4,111,866 - +0.2 4,111,866 - -1.8 4,111,868 + -1.1 4,111,868 + -2.3 4,111,869 - -0.9
Or see this region's nucleotide sequence