Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_18830 and IAI46_18835 are separated by 146 nucleotides IAI46_18835 and IAI46_18840 are separated by 385 nucleotides
IAI46_18830: IAI46_18830 - FAD-dependent oxidoreductase, at 3,964,553 to 3,965,761
_18830
IAI46_18835: IAI46_18835 - Rrf2 family transcriptional regulator, at 3,965,908 to 3,966,450
_18835
IAI46_18840: IAI46_18840 - M48 family metallopeptidase, at 3,966,836 to 3,968,305
_18840
Position (kb)
3965
3966
3967 Strain fitness (log2 ratio)
-2
-1
0
1 at 3964.945 kb on + strand, within IAI46_18830 at 3964.946 kb on - strand, within IAI46_18830 at 3964.985 kb on + strand, within IAI46_18830 at 3964.986 kb on - strand, within IAI46_18830 at 3964.986 kb on - strand, within IAI46_18830 at 3965.232 kb on - strand, within IAI46_18830 at 3965.232 kb on - strand, within IAI46_18830 at 3965.380 kb on + strand, within IAI46_18830 at 3965.380 kb on + strand, within IAI46_18830 at 3965.380 kb on + strand, within IAI46_18830 at 3965.381 kb on - strand, within IAI46_18830 at 3965.381 kb on - strand, within IAI46_18830 at 3965.517 kb on - strand, within IAI46_18830 at 3965.950 kb on - strand at 3965.980 kb on - strand, within IAI46_18835 at 3966.436 kb on - strand at 3966.436 kb on - strand at 3966.436 kb on - strand at 3966.444 kb on - strand at 3966.444 kb on - strand at 3966.444 kb on - strand at 3966.444 kb on - strand at 3966.451 kb on - strand at 3966.491 kb on + strand at 3966.493 kb on + strand at 3966.643 kb on + strand at 3966.682 kb on + strand at 3966.690 kb on + strand at 3966.690 kb on + strand at 3966.690 kb on + strand at 3966.690 kb on + strand at 3966.690 kb on + strand at 3966.691 kb on - strand at 3966.691 kb on - strand at 3966.764 kb on + strand at 3966.765 kb on - strand at 3966.804 kb on + strand at 3966.805 kb on - strand at 3966.805 kb on - strand at 3966.805 kb on - strand at 3966.805 kb on - strand at 3966.814 kb on + strand at 3966.814 kb on + strand at 3966.814 kb on + strand at 3966.815 kb on - strand at 3966.815 kb on - strand at 3966.815 kb on - strand at 3966.819 kb on - strand at 3966.819 kb on - strand at 3966.835 kb on + strand at 3966.835 kb on + strand at 3966.835 kb on + strand at 3966.836 kb on - strand at 3966.836 kb on - strand at 3966.836 kb on - strand at 3966.836 kb on - strand at 3966.836 kb on - strand at 3966.871 kb on - strand at 3966.871 kb on - strand at 3966.913 kb on - strand at 3966.973 kb on + strand at 3967.050 kb on + strand, within IAI46_18840 at 3967.061 kb on + strand, within IAI46_18840 at 3967.061 kb on + strand, within IAI46_18840 at 3967.061 kb on + strand, within IAI46_18840 at 3967.062 kb on - strand, within IAI46_18840 at 3967.064 kb on - strand, within IAI46_18840 at 3967.064 kb on - strand, within IAI46_18840 at 3967.064 kb on - strand, within IAI46_18840 at 3967.064 kb on - strand, within IAI46_18840 at 3967.066 kb on + strand, within IAI46_18840 at 3967.128 kb on - strand, within IAI46_18840 at 3967.427 kb on - strand, within IAI46_18840
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 3,964,945 + IAI46_18830 0.32 -0.1 3,964,946 - IAI46_18830 0.33 +0.3 3,964,985 + IAI46_18830 0.36 +0.1 3,964,986 - IAI46_18830 0.36 +0.5 3,964,986 - IAI46_18830 0.36 +0.4 3,965,232 - IAI46_18830 0.56 -0.1 3,965,232 - IAI46_18830 0.56 -0.4 3,965,380 + IAI46_18830 0.68 -0.8 3,965,380 + IAI46_18830 0.68 +0.6 3,965,380 + IAI46_18830 0.68 -0.0 3,965,381 - IAI46_18830 0.68 +0.7 3,965,381 - IAI46_18830 0.68 +0.2 3,965,517 - IAI46_18830 0.80 +0.3 3,965,950 - +0.4 3,965,980 - IAI46_18835 0.13 -0.4 3,966,436 - +0.8 3,966,436 - +0.7 3,966,436 - +1.6 3,966,444 - -1.2 3,966,444 - -0.0 3,966,444 - -2.2 3,966,444 - -0.5 3,966,451 - +0.1 3,966,491 + -0.3 3,966,493 + -0.6 3,966,643 + +1.0 3,966,682 + +0.3 3,966,690 + +1.4 3,966,690 + +0.1 3,966,690 + +0.6 3,966,690 + -0.0 3,966,690 + -0.2 3,966,691 - +0.7 3,966,691 - -0.7 3,966,764 + -1.7 3,966,765 - +0.3 3,966,804 + +0.4 3,966,805 - +0.1 3,966,805 - +1.0 3,966,805 - -0.0 3,966,805 - +0.4 3,966,814 + -0.8 3,966,814 + +0.8 3,966,814 + -0.8 3,966,815 - +0.8 3,966,815 - +0.7 3,966,815 - +0.6 3,966,819 - -1.1 3,966,819 - +0.3 3,966,835 + -0.4 3,966,835 + +0.5 3,966,835 + +1.1 3,966,836 - +0.0 3,966,836 - -0.7 3,966,836 - +0.3 3,966,836 - -0.7 3,966,836 - -0.0 3,966,871 - -0.8 3,966,871 - +0.4 3,966,913 - -0.1 3,966,973 + +0.3 3,967,050 + IAI46_18840 0.15 -0.3 3,967,061 + IAI46_18840 0.15 -0.4 3,967,061 + IAI46_18840 0.15 -1.9 3,967,061 + IAI46_18840 0.15 -0.7 3,967,062 - IAI46_18840 0.15 +0.8 3,967,064 - IAI46_18840 0.16 -0.4 3,967,064 - IAI46_18840 0.16 -0.1 3,967,064 - IAI46_18840 0.16 -2.1 3,967,064 - IAI46_18840 0.16 -1.5 3,967,066 + IAI46_18840 0.16 +1.0 3,967,128 - IAI46_18840 0.20 -1.3 3,967,427 - IAI46_18840 0.40 +0.7
Or see this region's nucleotide sequence