Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_18445 and IAI46_18450 are separated by 138 nucleotides IAI46_18450 and IAI46_18455 are separated by 107 nucleotides IAI46_18455 and IAI46_18460 are separated by 46 nucleotides IAI46_18460 and IAI46_18465 are separated by 49 nucleotides IAI46_18465 and IAI46_18470 are separated by 264 nucleotides
IAI46_18445: IAI46_18445 - cysteine synthase A, at 3,883,993 to 3,884,961
_18445
IAI46_18450: IAI46_18450 - hypothetical protein, at 3,885,100 to 3,885,249
_18450
IAI46_18455: IAI46_18455 - phosphocarrier protein Hpr, at 3,885,357 to 3,885,614
_18455
IAI46_18460: IAI46_18460 - phosphoenolpyruvate-protein phosphotransferase PtsI, at 3,885,661 to 3,887,388
_18460
IAI46_18465: IAI46_18465 - PTS glucose transporter subunit IIA, at 3,887,438 to 3,887,947
_18465
IAI46_18470: IAI46_18470 - HAMP domain-containing protein, at 3,888,212 to 3,889,528
_18470
Position (kb)
3885
3886
3887
3888 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3884.872 kb on - strand at 3884.905 kb on + strand at 3884.975 kb on + strand at 3884.976 kb on - strand at 3885.053 kb on - strand at 3885.069 kb on - strand at 3885.240 kb on + strand at 3885.265 kb on + strand at 3885.270 kb on + strand at 3885.271 kb on - strand at 3885.271 kb on - strand at 3885.294 kb on + strand at 3885.294 kb on + strand at 3885.294 kb on + strand at 3885.294 kb on + strand at 3885.294 kb on + strand at 3885.339 kb on + strand at 3885.589 kb on + strand at 3885.612 kb on + strand at 3885.634 kb on - strand at 3885.649 kb on + strand at 3885.654 kb on + strand at 3885.660 kb on + strand at 3885.681 kb on - strand at 3885.767 kb on + strand at 3885.767 kb on + strand at 3885.767 kb on + strand at 3885.767 kb on + strand at 3885.767 kb on + strand at 3885.767 kb on + strand at 3885.873 kb on + strand, within IAI46_18460 at 3885.930 kb on - strand, within IAI46_18460 at 3885.974 kb on - strand, within IAI46_18460 at 3886.080 kb on + strand, within IAI46_18460 at 3886.080 kb on + strand, within IAI46_18460 at 3886.396 kb on + strand, within IAI46_18460 at 3886.549 kb on - strand, within IAI46_18460 at 3886.743 kb on + strand, within IAI46_18460 at 3887.027 kb on + strand, within IAI46_18460 at 3887.036 kb on - strand, within IAI46_18460 at 3887.037 kb on + strand, within IAI46_18460 at 3887.037 kb on + strand, within IAI46_18460 at 3887.204 kb on + strand, within IAI46_18460 at 3887.358 kb on + strand at 3887.419 kb on + strand at 3887.419 kb on + strand at 3887.559 kb on + strand, within IAI46_18465 at 3887.560 kb on - strand, within IAI46_18465 at 3887.945 kb on + strand at 3887.946 kb on - strand at 3887.961 kb on - strand at 3887.961 kb on - strand at 3888.010 kb on + strand at 3888.014 kb on + strand at 3888.014 kb on + strand at 3888.014 kb on + strand at 3888.015 kb on - strand at 3888.015 kb on - strand at 3888.015 kb on - strand at 3888.023 kb on + strand at 3888.023 kb on + strand at 3888.024 kb on - strand at 3888.024 kb on - strand at 3888.059 kb on - strand at 3888.082 kb on + strand at 3888.083 kb on - strand at 3888.138 kb on + strand at 3888.139 kb on - strand at 3888.139 kb on - strand at 3888.139 kb on - strand at 3888.146 kb on + strand at 3888.146 kb on + strand at 3888.146 kb on + strand at 3888.147 kb on - strand at 3888.210 kb on + strand at 3888.210 kb on + strand at 3888.211 kb on - strand at 3888.211 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 3,884,872 - -0.0 3,884,905 + +0.4 3,884,975 + +0.2 3,884,976 - -0.0 3,885,053 - -1.7 3,885,069 - +0.3 3,885,240 + -1.4 3,885,265 + -0.9 3,885,270 + +0.3 3,885,271 - -1.0 3,885,271 - -0.2 3,885,294 + -1.0 3,885,294 + -1.6 3,885,294 + -0.6 3,885,294 + -1.8 3,885,294 + -1.4 3,885,339 + -2.4 3,885,589 + -1.4 3,885,612 + -1.6 3,885,634 - -0.3 3,885,649 + +1.1 3,885,654 + -0.6 3,885,660 + -2.2 3,885,681 - -1.4 3,885,767 + -0.2 3,885,767 + -1.4 3,885,767 + +1.0 3,885,767 + -0.0 3,885,767 + -1.9 3,885,767 + -0.0 3,885,873 + IAI46_18460 0.12 -1.8 3,885,930 - IAI46_18460 0.16 -0.6 3,885,974 - IAI46_18460 0.18 -1.2 3,886,080 + IAI46_18460 0.24 -1.4 3,886,080 + IAI46_18460 0.24 -2.3 3,886,396 + IAI46_18460 0.43 -2.4 3,886,549 - IAI46_18460 0.51 +0.8 3,886,743 + IAI46_18460 0.63 -1.5 3,887,027 + IAI46_18460 0.79 -1.6 3,887,036 - IAI46_18460 0.80 -1.0 3,887,037 + IAI46_18460 0.80 -0.6 3,887,037 + IAI46_18460 0.80 -0.7 3,887,204 + IAI46_18460 0.89 -0.0 3,887,358 + +0.0 3,887,419 + -0.0 3,887,419 + +0.3 3,887,559 + IAI46_18465 0.24 +2.8 3,887,560 - IAI46_18465 0.24 +0.4 3,887,945 + +0.9 3,887,946 - -0.0 3,887,961 - -0.7 3,887,961 - -2.5 3,888,010 + +0.7 3,888,014 + +1.0 3,888,014 + -0.1 3,888,014 + -0.2 3,888,015 - +0.6 3,888,015 - -0.8 3,888,015 - -0.2 3,888,023 + -0.9 3,888,023 + -0.4 3,888,024 - +0.9 3,888,024 - +0.2 3,888,059 - +0.3 3,888,082 + -0.5 3,888,083 - -0.0 3,888,138 + -0.8 3,888,139 - +1.6 3,888,139 - -0.3 3,888,139 - +0.8 3,888,146 + -0.4 3,888,146 + +0.0 3,888,146 + +1.4 3,888,147 - +1.4 3,888,210 + -0.3 3,888,210 + +0.8 3,888,211 - +0.2 3,888,211 - +0.5
Or see this region's nucleotide sequence