Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_17640 and IAI46_17645 are separated by 39 nucleotides IAI46_17645 and IAI46_17650 are separated by 62 nucleotides IAI46_17650 and IAI46_17655 are separated by 6 nucleotides
IAI46_17640: IAI46_17640 - type II toxin-antitoxin system RelE/ParE family toxin, at 3,717,431 to 3,717,691
_17640
IAI46_17645: IAI46_17645 - helix-turn-helix domain-containing protein, at 3,717,731 to 3,718,096
_17645
IAI46_17650: IAI46_17650 - NADH-quinone oxidoreductase subunit NuoN, at 3,718,159 to 3,719,616
_17650
IAI46_17655: IAI46_17655 - NADH-quinone oxidoreductase subunit M, at 3,719,623 to 3,721,152
_17655
Position (kb)
3718
3719
3720 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3717.309 kb on + strand at 3717.309 kb on + strand at 3717.387 kb on + strand at 3717.395 kb on + strand at 3717.443 kb on - strand at 3717.464 kb on - strand, within IAI46_17640 at 3717.640 kb on + strand, within IAI46_17640 at 3717.640 kb on + strand, within IAI46_17640 at 3717.640 kb on + strand, within IAI46_17640 at 3717.640 kb on + strand, within IAI46_17640 at 3717.671 kb on - strand at 3717.671 kb on - strand at 3717.687 kb on - strand at 3717.741 kb on + strand at 3717.746 kb on + strand at 3717.746 kb on + strand at 3717.746 kb on + strand at 3717.747 kb on - strand at 3717.747 kb on - strand at 3717.748 kb on + strand at 3717.748 kb on + strand at 3717.748 kb on + strand at 3717.748 kb on + strand at 3717.776 kb on + strand, within IAI46_17645 at 3717.783 kb on + strand, within IAI46_17645 at 3717.801 kb on - strand, within IAI46_17645 at 3717.803 kb on - strand, within IAI46_17645 at 3717.830 kb on + strand, within IAI46_17645 at 3717.831 kb on - strand, within IAI46_17645 at 3717.850 kb on + strand, within IAI46_17645 at 3717.851 kb on - strand, within IAI46_17645 at 3717.851 kb on - strand, within IAI46_17645 at 3717.896 kb on - strand, within IAI46_17645 at 3718.062 kb on + strand at 3718.062 kb on + strand at 3718.062 kb on + strand at 3718.064 kb on + strand at 3718.064 kb on + strand at 3718.072 kb on + strand at 3718.072 kb on + strand at 3718.073 kb on - strand at 3718.094 kb on + strand at 3718.095 kb on - strand at 3718.095 kb on - strand at 3718.095 kb on - strand at 3718.252 kb on + strand at 3718.344 kb on - strand, within IAI46_17650 at 3718.347 kb on - strand, within IAI46_17650 at 3718.347 kb on - strand, within IAI46_17650 at 3718.349 kb on + strand, within IAI46_17650 at 3718.512 kb on + strand, within IAI46_17650 at 3718.513 kb on - strand, within IAI46_17650 at 3719.141 kb on + strand, within IAI46_17650 at 3719.300 kb on + strand, within IAI46_17650 at 3719.352 kb on + strand, within IAI46_17650 at 3719.391 kb on - strand, within IAI46_17650 at 3719.391 kb on - strand, within IAI46_17650 at 3719.391 kb on - strand, within IAI46_17650 at 3719.459 kb on + strand, within IAI46_17650 at 3719.539 kb on + strand at 3719.608 kb on + strand at 3719.624 kb on + strand at 3719.695 kb on - strand at 3719.695 kb on - strand at 3719.695 kb on - strand at 3719.823 kb on - strand, within IAI46_17655 at 3719.823 kb on - strand, within IAI46_17655 at 3719.909 kb on + strand, within IAI46_17655 at 3719.946 kb on + strand, within IAI46_17655 at 3720.006 kb on - strand, within IAI46_17655 at 3720.012 kb on + strand, within IAI46_17655 at 3720.162 kb on - strand, within IAI46_17655 at 3720.162 kb on - strand, within IAI46_17655 at 3720.491 kb on + strand, within IAI46_17655 at 3720.491 kb on + strand, within IAI46_17655 at 3720.562 kb on - strand, within IAI46_17655 at 3720.565 kb on - strand, within IAI46_17655
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 3,717,309 + -1.2 3,717,309 + +0.1 3,717,387 + +0.4 3,717,395 + -0.9 3,717,443 - +0.2 3,717,464 - IAI46_17640 0.13 +0.1 3,717,640 + IAI46_17640 0.80 -0.3 3,717,640 + IAI46_17640 0.80 -0.4 3,717,640 + IAI46_17640 0.80 +0.8 3,717,640 + IAI46_17640 0.80 +0.9 3,717,671 - +0.6 3,717,671 - -0.6 3,717,687 - +1.1 3,717,741 + +0.3 3,717,746 + +1.2 3,717,746 + +0.8 3,717,746 + +0.7 3,717,747 - -0.9 3,717,747 - +0.8 3,717,748 + -0.4 3,717,748 + +0.4 3,717,748 + +0.3 3,717,748 + -1.2 3,717,776 + IAI46_17645 0.12 -1.0 3,717,783 + IAI46_17645 0.14 +1.1 3,717,801 - IAI46_17645 0.19 -0.5 3,717,803 - IAI46_17645 0.20 +0.4 3,717,830 + IAI46_17645 0.27 -1.7 3,717,831 - IAI46_17645 0.27 +0.2 3,717,850 + IAI46_17645 0.33 +0.0 3,717,851 - IAI46_17645 0.33 +0.3 3,717,851 - IAI46_17645 0.33 +0.9 3,717,896 - IAI46_17645 0.45 -0.1 3,718,062 + +0.3 3,718,062 + -1.2 3,718,062 + +1.3 3,718,064 + -0.2 3,718,064 + -1.3 3,718,072 + -0.3 3,718,072 + -2.1 3,718,073 - +0.0 3,718,094 + +0.2 3,718,095 - -0.6 3,718,095 - -0.3 3,718,095 - -0.4 3,718,252 + +0.3 3,718,344 - IAI46_17650 0.13 -0.4 3,718,347 - IAI46_17650 0.13 -1.0 3,718,347 - IAI46_17650 0.13 -0.6 3,718,349 + IAI46_17650 0.13 +0.1 3,718,512 + IAI46_17650 0.24 -1.1 3,718,513 - IAI46_17650 0.24 +1.8 3,719,141 + IAI46_17650 0.67 +0.3 3,719,300 + IAI46_17650 0.78 -1.3 3,719,352 + IAI46_17650 0.82 -0.5 3,719,391 - IAI46_17650 0.84 +1.4 3,719,391 - IAI46_17650 0.84 +0.4 3,719,391 - IAI46_17650 0.84 -0.3 3,719,459 + IAI46_17650 0.89 -0.9 3,719,539 + +0.4 3,719,608 + +2.5 3,719,624 + +1.4 3,719,695 - +0.4 3,719,695 - +0.1 3,719,695 - -2.1 3,719,823 - IAI46_17655 0.13 -0.0 3,719,823 - IAI46_17655 0.13 -1.1 3,719,909 + IAI46_17655 0.19 +0.1 3,719,946 + IAI46_17655 0.21 +0.7 3,720,006 - IAI46_17655 0.25 +0.6 3,720,012 + IAI46_17655 0.25 +1.7 3,720,162 - IAI46_17655 0.35 +0.8 3,720,162 - IAI46_17655 0.35 +1.0 3,720,491 + IAI46_17655 0.57 -0.5 3,720,491 + IAI46_17655 0.57 +0.2 3,720,562 - IAI46_17655 0.61 +2.2 3,720,565 - IAI46_17655 0.62 -0.3
Or see this region's nucleotide sequence