Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_16235 and IAI46_16240 are separated by 2 nucleotides IAI46_16240 and IAI46_16245 are separated by 100 nucleotides
IAI46_16235: IAI46_16235 - CoA transferase, at 3,403,898 to 3,405,283
_16235
IAI46_16240: IAI46_16240 - LysR family transcriptional regulator, at 3,405,286 to 3,406,158
_16240
IAI46_16245: IAI46_16245 - aspartate aminotransferase family protein, at 3,406,259 to 3,407,674
_16245
Position (kb)
3405
3406
3407 Strain fitness (log2 ratio)
-1
0
1 at 3404.589 kb on + strand, within IAI46_16235 at 3404.728 kb on + strand, within IAI46_16235 at 3405.038 kb on + strand, within IAI46_16235 at 3405.223 kb on - strand at 3405.313 kb on + strand at 3405.314 kb on - strand at 3405.314 kb on - strand at 3405.314 kb on - strand at 3405.531 kb on - strand, within IAI46_16240 at 3405.574 kb on - strand, within IAI46_16240 at 3405.574 kb on - strand, within IAI46_16240 at 3405.606 kb on + strand, within IAI46_16240 at 3405.789 kb on + strand, within IAI46_16240 at 3405.789 kb on + strand, within IAI46_16240 at 3405.790 kb on - strand, within IAI46_16240 at 3405.790 kb on - strand, within IAI46_16240 at 3405.790 kb on - strand, within IAI46_16240 at 3405.833 kb on - strand, within IAI46_16240 at 3406.115 kb on - strand at 3406.232 kb on + strand at 3406.232 kb on + strand at 3406.242 kb on + strand at 3406.255 kb on - strand at 3406.463 kb on + strand, within IAI46_16245 at 3406.499 kb on + strand, within IAI46_16245 at 3406.596 kb on - strand, within IAI46_16245 at 3406.750 kb on + strand, within IAI46_16245 at 3406.900 kb on + strand, within IAI46_16245 at 3406.933 kb on + strand, within IAI46_16245 at 3406.947 kb on + strand, within IAI46_16245 at 3406.951 kb on + strand, within IAI46_16245 at 3406.952 kb on - strand, within IAI46_16245 at 3406.985 kb on - strand, within IAI46_16245
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 3,404,589 + IAI46_16235 0.50 +0.2 3,404,728 + IAI46_16235 0.60 +1.1 3,405,038 + IAI46_16235 0.82 +0.4 3,405,223 - -0.7 3,405,313 + +1.0 3,405,314 - +1.0 3,405,314 - +0.3 3,405,314 - +0.0 3,405,531 - IAI46_16240 0.28 -0.4 3,405,574 - IAI46_16240 0.33 +0.6 3,405,574 - IAI46_16240 0.33 +0.1 3,405,606 + IAI46_16240 0.37 +0.5 3,405,789 + IAI46_16240 0.58 -0.8 3,405,789 + IAI46_16240 0.58 +0.7 3,405,790 - IAI46_16240 0.58 +0.6 3,405,790 - IAI46_16240 0.58 +0.7 3,405,790 - IAI46_16240 0.58 -0.8 3,405,833 - IAI46_16240 0.63 -0.0 3,406,115 - -0.4 3,406,232 + +0.9 3,406,232 + -0.5 3,406,242 + +0.5 3,406,255 - +1.4 3,406,463 + IAI46_16245 0.14 +0.1 3,406,499 + IAI46_16245 0.17 -0.7 3,406,596 - IAI46_16245 0.24 +1.5 3,406,750 + IAI46_16245 0.35 -0.1 3,406,900 + IAI46_16245 0.45 -1.4 3,406,933 + IAI46_16245 0.48 -0.7 3,406,947 + IAI46_16245 0.49 -0.4 3,406,951 + IAI46_16245 0.49 -1.6 3,406,952 - IAI46_16245 0.49 +0.2 3,406,985 - IAI46_16245 0.51 +1.2
Or see this region's nucleotide sequence