Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14730 and IAI46_14735 are separated by 129 nucleotides IAI46_14735 and IAI46_14740 are separated by 27 nucleotides IAI46_14740 and IAI46_14745 are separated by 154 nucleotides IAI46_14745 and IAI46_14750 are separated by 83 nucleotides
IAI46_14730: IAI46_14730 - hypothetical protein, at 3,121,003 to 3,121,251
_14730
IAI46_14735: IAI46_14735 - glutaredoxin 2, at 3,121,381 to 3,122,028
_14735
IAI46_14740: IAI46_14740 - phosphotransferase, at 3,122,056 to 3,123,696
_14740
IAI46_14745: IAI46_14745 - lipoprotein, at 3,123,851 to 3,124,414
_14745
IAI46_14750: IAI46_14750 - hypothetical protein, at 3,124,498 to 3,124,857
_14750
Position (kb)
3122
3123
3124 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3121.067 kb on - strand, within IAI46_14730 at 3121.295 kb on + strand at 3121.334 kb on + strand at 3121.344 kb on + strand at 3121.348 kb on + strand at 3121.349 kb on - strand at 3121.552 kb on + strand, within IAI46_14735 at 3121.570 kb on + strand, within IAI46_14735 at 3121.572 kb on + strand, within IAI46_14735 at 3121.666 kb on + strand, within IAI46_14735 at 3121.668 kb on + strand, within IAI46_14735 at 3121.669 kb on - strand, within IAI46_14735 at 3121.669 kb on - strand, within IAI46_14735 at 3121.669 kb on - strand, within IAI46_14735 at 3121.669 kb on - strand, within IAI46_14735 at 3121.669 kb on - strand, within IAI46_14735 at 3121.679 kb on + strand, within IAI46_14735 at 3121.746 kb on + strand, within IAI46_14735 at 3121.896 kb on + strand, within IAI46_14735 at 3121.896 kb on + strand, within IAI46_14735 at 3121.945 kb on - strand, within IAI46_14735 at 3121.980 kb on + strand at 3122.027 kb on - strand at 3122.044 kb on + strand at 3122.044 kb on + strand at 3122.044 kb on + strand at 3122.045 kb on - strand at 3122.047 kb on - strand at 3122.047 kb on - strand at 3122.047 kb on - strand at 3122.175 kb on - strand at 3122.511 kb on + strand, within IAI46_14740 at 3122.569 kb on + strand, within IAI46_14740 at 3122.570 kb on - strand, within IAI46_14740 at 3122.840 kb on + strand, within IAI46_14740 at 3122.841 kb on - strand, within IAI46_14740 at 3122.909 kb on - strand, within IAI46_14740 at 3122.909 kb on - strand, within IAI46_14740 at 3122.936 kb on + strand, within IAI46_14740 at 3122.936 kb on + strand, within IAI46_14740 at 3122.937 kb on - strand, within IAI46_14740 at 3123.324 kb on + strand, within IAI46_14740 at 3123.324 kb on + strand, within IAI46_14740 at 3123.353 kb on - strand, within IAI46_14740 at 3123.550 kb on - strand at 3123.550 kb on - strand at 3123.721 kb on + strand at 3123.722 kb on - strand at 3123.743 kb on + strand at 3123.796 kb on + strand at 3123.835 kb on + strand at 3123.836 kb on - strand at 3123.926 kb on + strand, within IAI46_14745 at 3124.036 kb on - strand, within IAI46_14745 at 3124.163 kb on + strand, within IAI46_14745 at 3124.164 kb on - strand, within IAI46_14745 at 3124.214 kb on + strand, within IAI46_14745 at 3124.214 kb on + strand, within IAI46_14745 at 3124.333 kb on + strand, within IAI46_14745 at 3124.396 kb on + strand at 3124.479 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 3,121,067 - IAI46_14730 0.26 +0.1 3,121,295 + +1.0 3,121,334 + -0.8 3,121,344 + -0.1 3,121,348 + -0.3 3,121,349 - -0.9 3,121,552 + IAI46_14735 0.26 -0.1 3,121,570 + IAI46_14735 0.29 +0.1 3,121,572 + IAI46_14735 0.29 -1.4 3,121,666 + IAI46_14735 0.44 +0.4 3,121,668 + IAI46_14735 0.44 +1.6 3,121,669 - IAI46_14735 0.44 +0.5 3,121,669 - IAI46_14735 0.44 -1.1 3,121,669 - IAI46_14735 0.44 -0.1 3,121,669 - IAI46_14735 0.44 -1.0 3,121,669 - IAI46_14735 0.44 +0.4 3,121,679 + IAI46_14735 0.46 -0.8 3,121,746 + IAI46_14735 0.56 -3.4 3,121,896 + IAI46_14735 0.79 +0.3 3,121,896 + IAI46_14735 0.79 +0.5 3,121,945 - IAI46_14735 0.87 +0.0 3,121,980 + -0.6 3,122,027 - +1.4 3,122,044 + -1.0 3,122,044 + +0.7 3,122,044 + -0.1 3,122,045 - +0.2 3,122,047 - -0.3 3,122,047 - +0.3 3,122,047 - -1.1 3,122,175 - -0.9 3,122,511 + IAI46_14740 0.28 -1.4 3,122,569 + IAI46_14740 0.31 +1.2 3,122,570 - IAI46_14740 0.31 -2.6 3,122,840 + IAI46_14740 0.48 -1.9 3,122,841 - IAI46_14740 0.48 -0.1 3,122,909 - IAI46_14740 0.52 -0.6 3,122,909 - IAI46_14740 0.52 -0.1 3,122,936 + IAI46_14740 0.54 +0.4 3,122,936 + IAI46_14740 0.54 +0.8 3,122,937 - IAI46_14740 0.54 -0.8 3,123,324 + IAI46_14740 0.77 -0.5 3,123,324 + IAI46_14740 0.77 +1.7 3,123,353 - IAI46_14740 0.79 -0.6 3,123,550 - -0.4 3,123,550 - -0.8 3,123,721 + -1.6 3,123,722 - +1.6 3,123,743 + +0.2 3,123,796 + +0.1 3,123,835 + -1.9 3,123,836 - -0.0 3,123,926 + IAI46_14745 0.13 -1.4 3,124,036 - IAI46_14745 0.33 +1.0 3,124,163 + IAI46_14745 0.55 +0.1 3,124,164 - IAI46_14745 0.55 +1.4 3,124,214 + IAI46_14745 0.64 -0.1 3,124,214 + IAI46_14745 0.64 +1.7 3,124,333 + IAI46_14745 0.85 -0.8 3,124,396 + -0.6 3,124,479 - +0.5
Or see this region's nucleotide sequence