Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_13600 and IAI46_13605 are separated by 898 nucleotides IAI46_13605 and IAI46_13610 are separated by 225 nucleotides IAI46_13610 and IAI46_13615 are separated by 54 nucleotides
IAI46_13600: IAI46_13600 - hypothetical protein, at 2,906,647 to 2,907,111
_13600
IAI46_13605: IAI46_13605 - hypothetical protein, at 2,908,010 to 2,908,579
_13605
IAI46_13610: IAI46_13610 - hypothetical protein, at 2,908,805 to 2,909,476
_13610
IAI46_13615: IAI46_13615 - Ig domain-containing protein, at 2,909,531 to 2,910,280
_13615
Position (kb)
2908
2909 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2907.245 kb on - strand at 2907.255 kb on + strand at 2907.264 kb on + strand at 2907.265 kb on - strand at 2907.361 kb on - strand at 2907.364 kb on - strand at 2907.374 kb on + strand at 2907.374 kb on + strand at 2907.374 kb on + strand at 2907.382 kb on - strand at 2907.517 kb on + strand at 2907.517 kb on + strand at 2907.596 kb on - strand at 2907.596 kb on - strand at 2907.596 kb on - strand at 2907.597 kb on + strand at 2907.597 kb on + strand at 2907.597 kb on + strand at 2907.598 kb on - strand at 2907.614 kb on + strand at 2907.664 kb on - strand at 2907.686 kb on - strand at 2907.691 kb on + strand at 2907.692 kb on - strand at 2907.988 kb on + strand at 2908.018 kb on + strand at 2908.099 kb on + strand, within IAI46_13605 at 2908.100 kb on - strand, within IAI46_13605 at 2908.124 kb on + strand, within IAI46_13605 at 2908.158 kb on - strand, within IAI46_13605 at 2908.160 kb on + strand, within IAI46_13605 at 2908.161 kb on - strand, within IAI46_13605 at 2908.166 kb on + strand, within IAI46_13605 at 2908.167 kb on - strand, within IAI46_13605 at 2908.228 kb on - strand, within IAI46_13605 at 2908.344 kb on + strand, within IAI46_13605 at 2908.345 kb on - strand, within IAI46_13605 at 2908.357 kb on - strand, within IAI46_13605 at 2908.423 kb on - strand, within IAI46_13605 at 2908.437 kb on + strand, within IAI46_13605 at 2908.438 kb on - strand, within IAI46_13605 at 2908.443 kb on + strand, within IAI46_13605 at 2908.479 kb on - strand, within IAI46_13605 at 2908.479 kb on - strand, within IAI46_13605 at 2908.504 kb on + strand, within IAI46_13605 at 2908.505 kb on - strand, within IAI46_13605 at 2908.505 kb on - strand, within IAI46_13605 at 2908.507 kb on + strand, within IAI46_13605 at 2908.604 kb on + strand at 2908.604 kb on + strand at 2908.605 kb on - strand at 2908.605 kb on - strand at 2908.619 kb on + strand at 2908.619 kb on + strand at 2908.705 kb on + strand at 2908.720 kb on - strand at 2908.730 kb on + strand at 2908.732 kb on + strand at 2908.788 kb on + strand at 2908.789 kb on - strand at 2908.807 kb on - strand at 2908.853 kb on - strand at 2908.896 kb on + strand, within IAI46_13610 at 2908.896 kb on + strand, within IAI46_13610 at 2909.017 kb on - strand, within IAI46_13610 at 2909.101 kb on + strand, within IAI46_13610 at 2909.102 kb on - strand, within IAI46_13610 at 2909.105 kb on - strand, within IAI46_13610 at 2909.159 kb on - strand, within IAI46_13610 at 2909.167 kb on + strand, within IAI46_13610 at 2909.168 kb on - strand, within IAI46_13610 at 2909.192 kb on - strand, within IAI46_13610 at 2909.192 kb on - strand, within IAI46_13610 at 2909.220 kb on - strand, within IAI46_13610 at 2909.233 kb on - strand, within IAI46_13610 at 2909.245 kb on + strand, within IAI46_13610 at 2909.298 kb on + strand, within IAI46_13610 at 2909.299 kb on - strand, within IAI46_13610 at 2909.342 kb on - strand, within IAI46_13610 at 2909.342 kb on - strand, within IAI46_13610 at 2909.384 kb on + strand, within IAI46_13610 at 2909.385 kb on - strand, within IAI46_13610 at 2909.395 kb on + strand, within IAI46_13610 at 2909.396 kb on - strand, within IAI46_13610 at 2909.396 kb on - strand, within IAI46_13610 at 2909.532 kb on + strand at 2909.532 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 2,907,245 - -0.1 2,907,255 + -0.7 2,907,264 + +0.2 2,907,265 - -0.5 2,907,361 - +2.2 2,907,364 - -0.0 2,907,374 + -1.4 2,907,374 + -0.2 2,907,374 + +2.3 2,907,382 - +1.0 2,907,517 + +0.0 2,907,517 + +0.0 2,907,596 - -1.2 2,907,596 - -2.6 2,907,596 - -0.6 2,907,597 + -1.0 2,907,597 + -0.0 2,907,597 + -0.5 2,907,598 - -0.3 2,907,614 + +1.2 2,907,664 - +0.8 2,907,686 - +0.5 2,907,691 + +0.7 2,907,692 - -0.2 2,907,988 + -1.6 2,908,018 + -1.1 2,908,099 + IAI46_13605 0.16 +0.7 2,908,100 - IAI46_13605 0.16 +0.7 2,908,124 + IAI46_13605 0.20 -1.0 2,908,158 - IAI46_13605 0.26 +0.1 2,908,160 + IAI46_13605 0.26 +0.6 2,908,161 - IAI46_13605 0.26 -0.7 2,908,166 + IAI46_13605 0.27 +0.5 2,908,167 - IAI46_13605 0.28 +0.6 2,908,228 - IAI46_13605 0.38 +1.2 2,908,344 + IAI46_13605 0.59 +0.1 2,908,345 - IAI46_13605 0.59 +0.4 2,908,357 - IAI46_13605 0.61 -0.5 2,908,423 - IAI46_13605 0.72 -0.0 2,908,437 + IAI46_13605 0.75 +0.6 2,908,438 - IAI46_13605 0.75 +0.6 2,908,443 + IAI46_13605 0.76 +1.6 2,908,479 - IAI46_13605 0.82 -0.7 2,908,479 - IAI46_13605 0.82 +1.9 2,908,504 + IAI46_13605 0.87 -0.1 2,908,505 - IAI46_13605 0.87 +0.3 2,908,505 - IAI46_13605 0.87 -0.8 2,908,507 + IAI46_13605 0.87 -1.8 2,908,604 + +1.9 2,908,604 + -0.7 2,908,605 - -1.5 2,908,605 - -0.9 2,908,619 + -0.2 2,908,619 + +0.2 2,908,705 + +1.6 2,908,720 - -1.0 2,908,730 + -2.4 2,908,732 + +0.1 2,908,788 + +0.1 2,908,789 - +0.5 2,908,807 - +0.2 2,908,853 - +0.9 2,908,896 + IAI46_13610 0.14 -1.1 2,908,896 + IAI46_13610 0.14 -1.2 2,909,017 - IAI46_13610 0.32 +1.6 2,909,101 + IAI46_13610 0.44 -2.1 2,909,102 - IAI46_13610 0.44 -0.2 2,909,105 - IAI46_13610 0.45 +1.3 2,909,159 - IAI46_13610 0.53 +1.0 2,909,167 + IAI46_13610 0.54 -0.1 2,909,168 - IAI46_13610 0.54 +0.7 2,909,192 - IAI46_13610 0.58 -0.3 2,909,192 - IAI46_13610 0.58 +0.7 2,909,220 - IAI46_13610 0.62 +0.1 2,909,233 - IAI46_13610 0.64 +0.7 2,909,245 + IAI46_13610 0.65 +0.3 2,909,298 + IAI46_13610 0.73 +2.2 2,909,299 - IAI46_13610 0.74 +0.6 2,909,342 - IAI46_13610 0.80 +0.0 2,909,342 - IAI46_13610 0.80 +0.3 2,909,384 + IAI46_13610 0.86 -0.2 2,909,385 - IAI46_13610 0.86 +0.6 2,909,395 + IAI46_13610 0.88 +0.0 2,909,396 - IAI46_13610 0.88 +0.5 2,909,396 - IAI46_13610 0.88 +0.1 2,909,532 + +0.3 2,909,532 + -0.1
Or see this region's nucleotide sequence