Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_13570 and IAI46_13575 overlap by 116 nucleotides IAI46_13575 and IAI46_13580 are separated by 19 nucleotides IAI46_13580 and IAI46_13585 are separated by 0 nucleotides IAI46_13585 and IAI46_13590 are separated by 48 nucleotides
IAI46_13570: IAI46_13570 - MoaD/ThiS family protein, at 2,899,037 to 2,901,532
_13570
IAI46_13575: IAI46_13575 - C40 family peptidase, at 2,901,417 to 2,901,884
_13575
IAI46_13580: IAI46_13580 - DUF1833 family protein, at 2,901,904 to 2,902,374
_13580
IAI46_13585: IAI46_13585 - hypothetical protein, at 2,902,375 to 2,902,842
_13585
IAI46_13590: IAI46_13590 - hypothetical protein, at 2,902,891 to 2,903,319
_13590
Position (kb)
2901
2902
2903 Strain fitness (log2 ratio)
-1
0
1
2 at 2901.024 kb on + strand, within IAI46_13570 at 2901.024 kb on + strand, within IAI46_13570 at 2901.070 kb on + strand, within IAI46_13570 at 2901.087 kb on - strand, within IAI46_13570 at 2901.130 kb on - strand, within IAI46_13570 at 2901.163 kb on + strand, within IAI46_13570 at 2901.188 kb on - strand, within IAI46_13570 at 2901.392 kb on - strand at 2901.392 kb on - strand at 2901.413 kb on + strand at 2901.431 kb on + strand at 2901.532 kb on + strand at 2901.538 kb on + strand, within IAI46_13575 at 2901.539 kb on - strand, within IAI46_13575 at 2901.668 kb on - strand, within IAI46_13575 at 2901.681 kb on + strand, within IAI46_13575 at 2901.734 kb on + strand, within IAI46_13575 at 2901.734 kb on + strand, within IAI46_13575 at 2901.735 kb on - strand, within IAI46_13575 at 2901.766 kb on + strand, within IAI46_13575 at 2901.766 kb on + strand, within IAI46_13575 at 2901.783 kb on + strand, within IAI46_13575 at 2901.783 kb on + strand, within IAI46_13575 at 2901.812 kb on - strand, within IAI46_13575 at 2901.861 kb on - strand at 2901.942 kb on - strand at 2902.054 kb on - strand, within IAI46_13580 at 2902.082 kb on + strand, within IAI46_13580 at 2902.082 kb on + strand, within IAI46_13580 at 2902.233 kb on + strand, within IAI46_13580 at 2902.235 kb on + strand, within IAI46_13580 at 2902.236 kb on - strand, within IAI46_13580 at 2902.236 kb on - strand, within IAI46_13580 at 2902.289 kb on + strand, within IAI46_13580 at 2902.289 kb on + strand, within IAI46_13580 at 2902.307 kb on + strand, within IAI46_13580 at 2902.435 kb on + strand, within IAI46_13585 at 2902.475 kb on + strand, within IAI46_13585 at 2902.537 kb on + strand, within IAI46_13585 at 2902.665 kb on + strand, within IAI46_13585 at 2902.834 kb on + strand at 2902.962 kb on - strand, within IAI46_13590 at 2902.962 kb on - strand, within IAI46_13590 at 2903.013 kb on - strand, within IAI46_13590 at 2903.019 kb on + strand, within IAI46_13590 at 2903.019 kb on + strand, within IAI46_13590 at 2903.072 kb on + strand, within IAI46_13590 at 2903.072 kb on + strand, within IAI46_13590 at 2903.073 kb on - strand, within IAI46_13590 at 2903.076 kb on - strand, within IAI46_13590 at 2903.076 kb on - strand, within IAI46_13590 at 2903.095 kb on - strand, within IAI46_13590 at 2903.116 kb on - strand, within IAI46_13590 at 2903.192 kb on - strand, within IAI46_13590 at 2903.197 kb on + strand, within IAI46_13590 at 2903.197 kb on + strand, within IAI46_13590 at 2903.198 kb on - strand, within IAI46_13590 at 2903.198 kb on - strand, within IAI46_13590 at 2903.203 kb on - strand, within IAI46_13590 at 2903.214 kb on + strand, within IAI46_13590 at 2903.214 kb on + strand, within IAI46_13590 at 2903.240 kb on + strand, within IAI46_13590 at 2903.241 kb on - strand, within IAI46_13590 at 2903.255 kb on + strand, within IAI46_13590 at 2903.302 kb on - strand at 2903.302 kb on - strand at 2903.324 kb on - strand at 2903.354 kb on - strand at 2903.360 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 2,901,024 + IAI46_13570 0.80 +1.0 2,901,024 + IAI46_13570 0.80 +0.1 2,901,070 + IAI46_13570 0.81 +1.0 2,901,087 - IAI46_13570 0.82 +0.3 2,901,130 - IAI46_13570 0.84 -1.1 2,901,163 + IAI46_13570 0.85 +0.4 2,901,188 - IAI46_13570 0.86 +0.2 2,901,392 - -0.2 2,901,392 - -0.7 2,901,413 + -0.9 2,901,431 + -1.0 2,901,532 + +0.8 2,901,538 + IAI46_13575 0.26 +1.9 2,901,539 - IAI46_13575 0.26 +0.3 2,901,668 - IAI46_13575 0.54 +0.7 2,901,681 + IAI46_13575 0.56 +1.6 2,901,734 + IAI46_13575 0.68 +0.5 2,901,734 + IAI46_13575 0.68 -1.2 2,901,735 - IAI46_13575 0.68 +0.8 2,901,766 + IAI46_13575 0.75 +0.9 2,901,766 + IAI46_13575 0.75 +0.6 2,901,783 + IAI46_13575 0.78 -0.8 2,901,783 + IAI46_13575 0.78 +1.6 2,901,812 - IAI46_13575 0.84 +1.5 2,901,861 - -1.2 2,901,942 - -0.3 2,902,054 - IAI46_13580 0.32 +0.4 2,902,082 + IAI46_13580 0.38 -0.7 2,902,082 + IAI46_13580 0.38 +0.0 2,902,233 + IAI46_13580 0.70 -0.7 2,902,235 + IAI46_13580 0.70 +1.1 2,902,236 - IAI46_13580 0.70 +0.6 2,902,236 - IAI46_13580 0.70 -0.7 2,902,289 + IAI46_13580 0.82 -0.1 2,902,289 + IAI46_13580 0.82 +0.3 2,902,307 + IAI46_13580 0.86 +0.7 2,902,435 + IAI46_13585 0.13 +0.3 2,902,475 + IAI46_13585 0.21 +0.8 2,902,537 + IAI46_13585 0.35 -1.0 2,902,665 + IAI46_13585 0.62 +1.1 2,902,834 + +1.3 2,902,962 - IAI46_13590 0.17 +0.2 2,902,962 - IAI46_13590 0.17 -0.1 2,903,013 - IAI46_13590 0.28 +0.5 2,903,019 + IAI46_13590 0.30 -0.5 2,903,019 + IAI46_13590 0.30 -1.0 2,903,072 + IAI46_13590 0.42 +1.3 2,903,072 + IAI46_13590 0.42 +0.9 2,903,073 - IAI46_13590 0.42 -0.4 2,903,076 - IAI46_13590 0.43 +0.5 2,903,076 - IAI46_13590 0.43 +0.3 2,903,095 - IAI46_13590 0.48 +0.6 2,903,116 - IAI46_13590 0.52 -1.7 2,903,192 - IAI46_13590 0.70 -0.1 2,903,197 + IAI46_13590 0.71 -1.2 2,903,197 + IAI46_13590 0.71 -0.4 2,903,198 - IAI46_13590 0.72 -1.0 2,903,198 - IAI46_13590 0.72 +0.0 2,903,203 - IAI46_13590 0.73 -0.9 2,903,214 + IAI46_13590 0.75 -0.1 2,903,214 + IAI46_13590 0.75 -0.8 2,903,240 + IAI46_13590 0.81 -1.4 2,903,241 - IAI46_13590 0.82 -0.5 2,903,255 + IAI46_13590 0.85 +0.0 2,903,302 - -0.8 2,903,302 - -0.2 2,903,324 - +1.2 2,903,354 - -0.8 2,903,360 + -0.7
Or see this region's nucleotide sequence