Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12875 and IAI46_12880 are separated by 10 nucleotides IAI46_12880 and IAI46_12885 are separated by 373 nucleotides
IAI46_12875: IAI46_12875 - 4-hydroxybenzoate 3-monooxygenase, at 2,743,878 to 2,745,056
_12875
IAI46_12880: IAI46_12880 - MFS transporter, at 2,745,067 to 2,746,422
_12880
IAI46_12885: IAI46_12885 - glycosyl transferase, at 2,746,796 to 2,747,674
_12885
Position (kb)
2745
2746
2747 Strain fitness (log2 ratio)
-2
-1
0
1 at 2744.078 kb on - strand, within IAI46_12875 at 2744.282 kb on + strand, within IAI46_12875 at 2744.395 kb on + strand, within IAI46_12875 at 2744.518 kb on + strand, within IAI46_12875 at 2744.531 kb on - strand, within IAI46_12875 at 2744.644 kb on - strand, within IAI46_12875 at 2744.644 kb on - strand, within IAI46_12875 at 2744.736 kb on - strand, within IAI46_12875 at 2745.061 kb on - strand at 2745.069 kb on - strand at 2745.069 kb on - strand at 2745.069 kb on - strand at 2745.297 kb on - strand, within IAI46_12880 at 2745.393 kb on - strand, within IAI46_12880 at 2745.398 kb on + strand, within IAI46_12880 at 2745.623 kb on + strand, within IAI46_12880 at 2745.698 kb on - strand, within IAI46_12880 at 2745.757 kb on - strand, within IAI46_12880 at 2745.762 kb on + strand, within IAI46_12880 at 2745.763 kb on - strand, within IAI46_12880 at 2745.763 kb on - strand, within IAI46_12880 at 2746.004 kb on + strand, within IAI46_12880 at 2746.015 kb on + strand, within IAI46_12880 at 2746.144 kb on + strand, within IAI46_12880 at 2746.282 kb on - strand, within IAI46_12880 at 2746.288 kb on - strand at 2746.422 kb on + strand at 2746.465 kb on + strand at 2746.660 kb on + strand at 2746.778 kb on + strand at 2747.186 kb on + strand, within IAI46_12885 at 2747.187 kb on - strand, within IAI46_12885 at 2747.189 kb on - strand, within IAI46_12885 at 2747.272 kb on + strand, within IAI46_12885 at 2747.272 kb on + strand, within IAI46_12885 at 2747.335 kb on - strand, within IAI46_12885
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 2,744,078 - IAI46_12875 0.17 +0.1 2,744,282 + IAI46_12875 0.34 +0.5 2,744,395 + IAI46_12875 0.44 -0.0 2,744,518 + IAI46_12875 0.54 +0.3 2,744,531 - IAI46_12875 0.55 -0.1 2,744,644 - IAI46_12875 0.65 +0.9 2,744,644 - IAI46_12875 0.65 +0.3 2,744,736 - IAI46_12875 0.73 -1.7 2,745,061 - -1.1 2,745,069 - +0.1 2,745,069 - +0.3 2,745,069 - +0.1 2,745,297 - IAI46_12880 0.17 -0.7 2,745,393 - IAI46_12880 0.24 +0.5 2,745,398 + IAI46_12880 0.24 +1.1 2,745,623 + IAI46_12880 0.41 +0.7 2,745,698 - IAI46_12880 0.47 +1.2 2,745,757 - IAI46_12880 0.51 -0.9 2,745,762 + IAI46_12880 0.51 -0.7 2,745,763 - IAI46_12880 0.51 +0.4 2,745,763 - IAI46_12880 0.51 -1.2 2,746,004 + IAI46_12880 0.69 -0.3 2,746,015 + IAI46_12880 0.70 -0.5 2,746,144 + IAI46_12880 0.79 +0.2 2,746,282 - IAI46_12880 0.90 +0.5 2,746,288 - +1.3 2,746,422 + +0.3 2,746,465 + -0.2 2,746,660 + -1.1 2,746,778 + -2.1 2,747,186 + IAI46_12885 0.44 -0.6 2,747,187 - IAI46_12885 0.44 -0.6 2,747,189 - IAI46_12885 0.45 +1.3 2,747,272 + IAI46_12885 0.54 -0.3 2,747,272 + IAI46_12885 0.54 -0.0 2,747,335 - IAI46_12885 0.61 +0.4
Or see this region's nucleotide sequence