Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11520 and IAI46_11525 are separated by 104 nucleotides IAI46_11525 and IAI46_11530 are separated by 81 nucleotides
IAI46_11520: IAI46_11520 - L-arabinose ABC transporter permease AraH, at 2,432,727 to 2,433,710
_11520
IAI46_11525: IAI46_11525 - arabinose operon transcriptional regulator AraC, at 2,433,815 to 2,434,732
_11525
IAI46_11530: IAI46_11530 - oxidoreductase, at 2,434,814 to 2,435,854
_11530
Position (kb)
2433
2434
2435 Strain fitness (log2 ratio)
-2
-1
0
1 at 2433.015 kb on - strand, within IAI46_11520 at 2433.162 kb on + strand, within IAI46_11520 at 2433.163 kb on - strand, within IAI46_11520 at 2433.223 kb on - strand, within IAI46_11520 at 2433.265 kb on + strand, within IAI46_11520 at 2433.300 kb on - strand, within IAI46_11520 at 2433.321 kb on - strand, within IAI46_11520 at 2433.376 kb on + strand, within IAI46_11520 at 2433.377 kb on - strand, within IAI46_11520 at 2433.449 kb on + strand, within IAI46_11520 at 2433.449 kb on + strand, within IAI46_11520 at 2433.633 kb on + strand at 2433.633 kb on + strand at 2433.681 kb on + strand at 2433.772 kb on - strand at 2433.786 kb on + strand at 2433.787 kb on - strand at 2433.818 kb on + strand at 2433.882 kb on - strand at 2433.964 kb on + strand, within IAI46_11525 at 2434.023 kb on - strand, within IAI46_11525 at 2434.070 kb on + strand, within IAI46_11525 at 2434.070 kb on + strand, within IAI46_11525 at 2434.071 kb on - strand, within IAI46_11525 at 2434.071 kb on - strand, within IAI46_11525 at 2434.074 kb on - strand, within IAI46_11525 at 2434.210 kb on - strand, within IAI46_11525 at 2434.371 kb on + strand, within IAI46_11525 at 2434.496 kb on - strand, within IAI46_11525 at 2434.620 kb on + strand, within IAI46_11525 at 2434.667 kb on - strand at 2434.682 kb on + strand at 2434.713 kb on - strand at 2434.713 kb on - strand at 2434.713 kb on - strand at 2434.742 kb on + strand at 2434.801 kb on - strand at 2435.026 kb on + strand, within IAI46_11530 at 2435.027 kb on - strand, within IAI46_11530 at 2435.027 kb on - strand, within IAI46_11530 at 2435.457 kb on + strand, within IAI46_11530 at 2435.457 kb on + strand, within IAI46_11530 at 2435.494 kb on + strand, within IAI46_11530 at 2435.494 kb on + strand, within IAI46_11530 at 2435.494 kb on + strand, within IAI46_11530 at 2435.528 kb on - strand, within IAI46_11530 at 2435.717 kb on + strand, within IAI46_11530 at 2435.717 kb on + strand, within IAI46_11530
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 2,433,015 - IAI46_11520 0.29 -0.8 2,433,162 + IAI46_11520 0.44 +1.2 2,433,163 - IAI46_11520 0.44 +0.4 2,433,223 - IAI46_11520 0.50 -0.5 2,433,265 + IAI46_11520 0.55 -2.1 2,433,300 - IAI46_11520 0.58 +1.1 2,433,321 - IAI46_11520 0.60 -1.3 2,433,376 + IAI46_11520 0.66 -0.6 2,433,377 - IAI46_11520 0.66 -1.0 2,433,449 + IAI46_11520 0.73 +1.6 2,433,449 + IAI46_11520 0.73 -0.3 2,433,633 + +0.4 2,433,633 + +0.6 2,433,681 + +0.4 2,433,772 - -0.9 2,433,786 + -0.5 2,433,787 - -1.2 2,433,818 + +0.7 2,433,882 - +1.1 2,433,964 + IAI46_11525 0.16 +0.1 2,434,023 - IAI46_11525 0.23 +0.9 2,434,070 + IAI46_11525 0.28 +1.5 2,434,070 + IAI46_11525 0.28 +1.1 2,434,071 - IAI46_11525 0.28 -0.3 2,434,071 - IAI46_11525 0.28 +1.1 2,434,074 - IAI46_11525 0.28 +0.4 2,434,210 - IAI46_11525 0.43 -1.7 2,434,371 + IAI46_11525 0.61 +0.3 2,434,496 - IAI46_11525 0.74 +1.3 2,434,620 + IAI46_11525 0.88 +0.5 2,434,667 - -1.0 2,434,682 + +1.1 2,434,713 - +0.7 2,434,713 - -0.2 2,434,713 - +0.1 2,434,742 + +0.0 2,434,801 - -0.4 2,435,026 + IAI46_11530 0.20 +0.2 2,435,027 - IAI46_11530 0.20 +0.2 2,435,027 - IAI46_11530 0.20 +1.2 2,435,457 + IAI46_11530 0.62 +0.0 2,435,457 + IAI46_11530 0.62 -1.2 2,435,494 + IAI46_11530 0.65 +0.8 2,435,494 + IAI46_11530 0.65 -0.2 2,435,494 + IAI46_11530 0.65 +0.3 2,435,528 - IAI46_11530 0.69 -1.4 2,435,717 + IAI46_11530 0.87 -1.3 2,435,717 + IAI46_11530 0.87 +0.4
Or see this region's nucleotide sequence