Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_10890 and IAI46_10895 are separated by 132 nucleotides IAI46_10895 and IAI46_10900 are separated by 109 nucleotides
IAI46_10890: IAI46_10890 - metal ABC transporter substrate-binding protein, at 2,301,743 to 2,302,687
_10890
IAI46_10895: IAI46_10895 - type V toxin-antitoxin system endoribonuclease antitoxin GhoS, at 2,302,820 to 2,303,119
_10895
IAI46_10900: IAI46_10900 - transglycosylase SLT domain-containing protein, at 2,303,229 to 2,303,894
_10900
Position (kb)
2302
2303
2304 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2301.840 kb on + strand, within IAI46_10890 at 2301.841 kb on - strand, within IAI46_10890 at 2301.905 kb on - strand, within IAI46_10890 at 2302.030 kb on - strand, within IAI46_10890 at 2302.030 kb on - strand, within IAI46_10890 at 2302.153 kb on + strand, within IAI46_10890 at 2302.154 kb on - strand, within IAI46_10890 at 2302.225 kb on - strand, within IAI46_10890 at 2302.279 kb on - strand, within IAI46_10890 at 2302.279 kb on - strand, within IAI46_10890 at 2302.342 kb on + strand, within IAI46_10890 at 2302.342 kb on + strand, within IAI46_10890 at 2302.342 kb on + strand, within IAI46_10890 at 2302.439 kb on - strand, within IAI46_10890 at 2302.528 kb on + strand, within IAI46_10890 at 2302.822 kb on - strand at 2302.832 kb on - strand at 2302.832 kb on - strand at 2302.835 kb on + strand at 2302.848 kb on + strand at 2302.849 kb on - strand at 2302.857 kb on + strand, within IAI46_10895 at 2302.858 kb on - strand, within IAI46_10895 at 2302.925 kb on + strand, within IAI46_10895 at 2303.031 kb on - strand, within IAI46_10895 at 2303.031 kb on - strand, within IAI46_10895 at 2303.031 kb on - strand, within IAI46_10895 at 2303.060 kb on + strand, within IAI46_10895 at 2303.060 kb on + strand, within IAI46_10895 at 2303.061 kb on - strand, within IAI46_10895 at 2303.142 kb on + strand at 2303.182 kb on - strand at 2303.192 kb on + strand at 2303.303 kb on + strand, within IAI46_10900 at 2303.391 kb on + strand, within IAI46_10900 at 2303.391 kb on + strand, within IAI46_10900 at 2303.392 kb on - strand, within IAI46_10900 at 2303.424 kb on + strand, within IAI46_10900 at 2303.425 kb on - strand, within IAI46_10900 at 2303.425 kb on - strand, within IAI46_10900 at 2303.457 kb on - strand, within IAI46_10900 at 2303.515 kb on + strand, within IAI46_10900 at 2303.554 kb on - strand, within IAI46_10900 at 2303.561 kb on - strand, within IAI46_10900 at 2303.616 kb on - strand, within IAI46_10900 at 2303.635 kb on - strand, within IAI46_10900 at 2303.636 kb on + strand, within IAI46_10900 at 2303.636 kb on + strand, within IAI46_10900 at 2303.636 kb on + strand, within IAI46_10900 at 2303.636 kb on + strand, within IAI46_10900 at 2303.637 kb on - strand, within IAI46_10900 at 2303.643 kb on - strand, within IAI46_10900 at 2303.732 kb on + strand, within IAI46_10900 at 2303.805 kb on + strand, within IAI46_10900 at 2303.966 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 2,301,840 + IAI46_10890 0.10 +0.4 2,301,841 - IAI46_10890 0.10 +0.2 2,301,905 - IAI46_10890 0.17 -0.5 2,302,030 - IAI46_10890 0.30 +0.4 2,302,030 - IAI46_10890 0.30 +2.3 2,302,153 + IAI46_10890 0.43 +0.1 2,302,154 - IAI46_10890 0.43 +0.1 2,302,225 - IAI46_10890 0.51 -1.6 2,302,279 - IAI46_10890 0.57 +1.0 2,302,279 - IAI46_10890 0.57 -1.2 2,302,342 + IAI46_10890 0.63 -0.7 2,302,342 + IAI46_10890 0.63 -0.0 2,302,342 + IAI46_10890 0.63 -0.0 2,302,439 - IAI46_10890 0.74 +0.4 2,302,528 + IAI46_10890 0.83 -0.2 2,302,822 - -1.2 2,302,832 - +1.2 2,302,832 - -0.9 2,302,835 + -0.4 2,302,848 + -0.5 2,302,849 - +0.3 2,302,857 + IAI46_10895 0.12 +0.4 2,302,858 - IAI46_10895 0.13 +0.8 2,302,925 + IAI46_10895 0.35 -0.1 2,303,031 - IAI46_10895 0.70 +2.6 2,303,031 - IAI46_10895 0.70 +1.2 2,303,031 - IAI46_10895 0.70 -0.9 2,303,060 + IAI46_10895 0.80 +0.1 2,303,060 + IAI46_10895 0.80 +1.1 2,303,061 - IAI46_10895 0.80 +0.0 2,303,142 + +0.3 2,303,182 - -0.3 2,303,192 + +0.4 2,303,303 + IAI46_10900 0.11 -0.3 2,303,391 + IAI46_10900 0.24 +0.7 2,303,391 + IAI46_10900 0.24 -0.6 2,303,392 - IAI46_10900 0.24 +1.6 2,303,424 + IAI46_10900 0.29 +1.7 2,303,425 - IAI46_10900 0.29 +0.3 2,303,425 - IAI46_10900 0.29 +0.0 2,303,457 - IAI46_10900 0.34 -0.8 2,303,515 + IAI46_10900 0.43 -0.4 2,303,554 - IAI46_10900 0.49 +0.4 2,303,561 - IAI46_10900 0.50 -1.2 2,303,616 - IAI46_10900 0.58 -1.4 2,303,635 - IAI46_10900 0.61 +1.2 2,303,636 + IAI46_10900 0.61 -3.1 2,303,636 + IAI46_10900 0.61 +0.8 2,303,636 + IAI46_10900 0.61 -0.6 2,303,636 + IAI46_10900 0.61 +1.2 2,303,637 - IAI46_10900 0.61 -1.6 2,303,643 - IAI46_10900 0.62 +0.4 2,303,732 + IAI46_10900 0.76 +0.7 2,303,805 + IAI46_10900 0.86 -0.2 2,303,966 - -1.8
Or see this region's nucleotide sequence