Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_10465 and IAI46_10470 are separated by 289 nucleotides IAI46_10470 and IAI46_10475 are separated by 198 nucleotides
IAI46_10465: IAI46_10465 - Mig-14 family protein, at 2,211,671 to 2,212,591
_10465
IAI46_10470: IAI46_10470 - AI-2E family transporter, at 2,212,881 to 2,214,002
_10470
IAI46_10475: IAI46_10475 - MFS transporter, at 2,214,201 to 2,215,412
_10475
Position (kb)
2212
2213
2214
2215 Strain fitness (log2 ratio)
-1
0
1
2 at 2211.887 kb on - strand, within IAI46_10465 at 2211.905 kb on + strand, within IAI46_10465 at 2211.976 kb on + strand, within IAI46_10465 at 2211.977 kb on - strand, within IAI46_10465 at 2212.046 kb on + strand, within IAI46_10465 at 2212.206 kb on - strand, within IAI46_10465 at 2212.224 kb on - strand, within IAI46_10465 at 2212.307 kb on + strand, within IAI46_10465 at 2212.410 kb on - strand, within IAI46_10465 at 2212.414 kb on + strand, within IAI46_10465 at 2212.435 kb on + strand, within IAI46_10465 at 2212.435 kb on + strand, within IAI46_10465 at 2212.440 kb on + strand, within IAI46_10465 at 2212.441 kb on - strand, within IAI46_10465 at 2212.441 kb on - strand, within IAI46_10465 at 2212.466 kb on - strand, within IAI46_10465 at 2212.591 kb on + strand at 2212.591 kb on + strand at 2212.629 kb on - strand at 2212.687 kb on + strand at 2212.717 kb on + strand at 2212.717 kb on + strand at 2212.754 kb on - strand at 2213.041 kb on + strand, within IAI46_10470 at 2213.042 kb on - strand, within IAI46_10470 at 2213.081 kb on - strand, within IAI46_10470 at 2213.206 kb on + strand, within IAI46_10470 at 2213.207 kb on - strand, within IAI46_10470 at 2213.494 kb on + strand, within IAI46_10470 at 2213.495 kb on - strand, within IAI46_10470 at 2213.496 kb on + strand, within IAI46_10470 at 2213.497 kb on - strand, within IAI46_10470 at 2213.537 kb on + strand, within IAI46_10470 at 2213.608 kb on - strand, within IAI46_10470 at 2213.631 kb on - strand, within IAI46_10470 at 2213.631 kb on - strand, within IAI46_10470 at 2213.631 kb on - strand, within IAI46_10470 at 2213.708 kb on + strand, within IAI46_10470 at 2213.895 kb on - strand at 2213.915 kb on - strand at 2213.915 kb on - strand at 2213.917 kb on + strand at 2213.917 kb on + strand at 2213.936 kb on + strand at 2213.954 kb on + strand at 2213.987 kb on + strand at 2213.994 kb on - strand at 2213.994 kb on - strand at 2214.002 kb on + strand at 2214.020 kb on + strand at 2214.128 kb on - strand at 2214.140 kb on + strand at 2214.141 kb on - strand at 2214.144 kb on - strand at 2214.144 kb on - strand at 2214.144 kb on - strand at 2214.144 kb on - strand at 2214.144 kb on - strand at 2214.168 kb on - strand at 2214.477 kb on + strand, within IAI46_10475 at 2214.663 kb on + strand, within IAI46_10475 at 2214.665 kb on + strand, within IAI46_10475 at 2214.721 kb on + strand, within IAI46_10475 at 2214.721 kb on + strand, within IAI46_10475 at 2214.722 kb on - strand, within IAI46_10475 at 2214.722 kb on - strand, within IAI46_10475 at 2214.722 kb on - strand, within IAI46_10475 at 2214.726 kb on - strand, within IAI46_10475 at 2214.726 kb on - strand, within IAI46_10475 at 2214.726 kb on - strand, within IAI46_10475 at 2214.728 kb on + strand, within IAI46_10475 at 2214.729 kb on - strand, within IAI46_10475 at 2214.732 kb on + strand, within IAI46_10475
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 2,211,887 - IAI46_10465 0.23 -0.4 2,211,905 + IAI46_10465 0.25 +0.1 2,211,976 + IAI46_10465 0.33 +0.6 2,211,977 - IAI46_10465 0.33 +0.2 2,212,046 + IAI46_10465 0.41 -0.6 2,212,206 - IAI46_10465 0.58 +0.4 2,212,224 - IAI46_10465 0.60 +0.4 2,212,307 + IAI46_10465 0.69 +0.2 2,212,410 - IAI46_10465 0.80 -1.0 2,212,414 + IAI46_10465 0.81 +0.8 2,212,435 + IAI46_10465 0.83 +0.0 2,212,435 + IAI46_10465 0.83 +0.4 2,212,440 + IAI46_10465 0.83 +0.0 2,212,441 - IAI46_10465 0.84 -0.4 2,212,441 - IAI46_10465 0.84 +1.2 2,212,466 - IAI46_10465 0.86 -0.4 2,212,591 + +0.8 2,212,591 + -0.1 2,212,629 - +0.3 2,212,687 + +1.2 2,212,717 + +1.6 2,212,717 + +1.4 2,212,754 - +0.7 2,213,041 + IAI46_10470 0.14 -0.1 2,213,042 - IAI46_10470 0.14 +1.0 2,213,081 - IAI46_10470 0.18 -0.5 2,213,206 + IAI46_10470 0.29 +1.8 2,213,207 - IAI46_10470 0.29 +1.6 2,213,494 + IAI46_10470 0.55 +0.1 2,213,495 - IAI46_10470 0.55 -0.3 2,213,496 + IAI46_10470 0.55 -1.5 2,213,497 - IAI46_10470 0.55 -0.5 2,213,537 + IAI46_10470 0.58 +1.0 2,213,608 - IAI46_10470 0.65 -0.2 2,213,631 - IAI46_10470 0.67 -1.2 2,213,631 - IAI46_10470 0.67 +0.0 2,213,631 - IAI46_10470 0.67 -0.9 2,213,708 + IAI46_10470 0.74 -1.7 2,213,895 - +0.0 2,213,915 - +0.8 2,213,915 - +0.1 2,213,917 + +0.3 2,213,917 + -0.2 2,213,936 + -0.0 2,213,954 + +0.1 2,213,987 + -1.2 2,213,994 - +0.4 2,213,994 - +1.0 2,214,002 + +0.3 2,214,020 + +0.2 2,214,128 - -0.5 2,214,140 + -1.1 2,214,141 - +0.6 2,214,144 - +0.1 2,214,144 - +0.6 2,214,144 - -0.4 2,214,144 - +0.1 2,214,144 - +0.8 2,214,168 - -1.3 2,214,477 + IAI46_10475 0.23 +0.3 2,214,663 + IAI46_10475 0.38 +0.1 2,214,665 + IAI46_10475 0.38 +1.3 2,214,721 + IAI46_10475 0.43 +0.6 2,214,721 + IAI46_10475 0.43 +1.1 2,214,722 - IAI46_10475 0.43 +0.4 2,214,722 - IAI46_10475 0.43 +1.6 2,214,722 - IAI46_10475 0.43 +0.6 2,214,726 - IAI46_10475 0.43 -1.2 2,214,726 - IAI46_10475 0.43 +1.4 2,214,726 - IAI46_10475 0.43 +0.0 2,214,728 + IAI46_10475 0.43 -1.4 2,214,729 - IAI46_10475 0.44 +0.3 2,214,732 + IAI46_10475 0.44 +0.0
Or see this region's nucleotide sequence