Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09385 and IAI46_09390 overlap by 14 nucleotides IAI46_09390 and IAI46_09395 overlap by 8 nucleotides IAI46_09395 and IAI46_09400 overlap by 4 nucleotides IAI46_09400 and IAI46_09405 are separated by 4 nucleotides IAI46_09405 and IAI46_09410 are separated by 379 nucleotides IAI46_09410 and IAI46_09415 are separated by 1 nucleotides
IAI46_09385: IAI46_09385 - hypothetical protein, at 2,001,083 to 2,001,511
_09385
IAI46_09390: IAI46_09390 - hypothetical protein, at 2,001,498 to 2,001,893
_09390
IAI46_09395: IAI46_09395 - hypothetical protein, at 2,001,886 to 2,002,068
_09395
IAI46_09400: IAI46_09400 - hypothetical protein, at 2,002,065 to 2,002,364
_09400
IAI46_09405: IAI46_09405 - hypothetical protein, at 2,002,369 to 2,002,857
_09405
IAI46_09410: IAI46_09410 - hypothetical protein, at 2,003,237 to 2,003,647
_09410
IAI46_09415: IAI46_09415 - hypothetical protein, at 2,003,649 to 2,003,903
_09415
Position (kb)
2002
2003 Strain fitness (log2 ratio)
-1
0
1
2 at 2001.377 kb on + strand, within IAI46_09385 at 2001.404 kb on + strand, within IAI46_09385 at 2001.429 kb on + strand, within IAI46_09385 at 2001.657 kb on - strand, within IAI46_09390 at 2001.660 kb on + strand, within IAI46_09390 at 2001.748 kb on - strand, within IAI46_09390 at 2001.842 kb on + strand, within IAI46_09390 at 2001.903 kb on - strand at 2001.976 kb on + strand, within IAI46_09395 at 2001.976 kb on + strand, within IAI46_09395 at 2002.019 kb on + strand, within IAI46_09395 at 2002.019 kb on + strand, within IAI46_09395 at 2002.019 kb on + strand, within IAI46_09395 at 2002.020 kb on - strand, within IAI46_09395 at 2002.020 kb on - strand, within IAI46_09395 at 2002.064 kb on + strand at 2002.064 kb on + strand at 2002.064 kb on + strand at 2002.065 kb on - strand at 2002.073 kb on - strand at 2002.085 kb on + strand at 2002.086 kb on - strand at 2002.205 kb on + strand, within IAI46_09400 at 2002.211 kb on + strand, within IAI46_09400 at 2002.212 kb on - strand, within IAI46_09400 at 2002.317 kb on + strand, within IAI46_09400 at 2002.317 kb on + strand, within IAI46_09400 at 2002.318 kb on - strand, within IAI46_09400 at 2002.377 kb on + strand at 2002.437 kb on + strand, within IAI46_09405 at 2002.547 kb on - strand, within IAI46_09405 at 2002.551 kb on - strand, within IAI46_09405
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 2,001,377 + IAI46_09385 0.69 -0.8 2,001,404 + IAI46_09385 0.75 -0.1 2,001,429 + IAI46_09385 0.81 +0.4 2,001,657 - IAI46_09390 0.40 -0.5 2,001,660 + IAI46_09390 0.41 +0.2 2,001,748 - IAI46_09390 0.63 -0.5 2,001,842 + IAI46_09390 0.87 -1.1 2,001,903 - -0.2 2,001,976 + IAI46_09395 0.49 +0.2 2,001,976 + IAI46_09395 0.49 +0.7 2,002,019 + IAI46_09395 0.73 -1.2 2,002,019 + IAI46_09395 0.73 +0.1 2,002,019 + IAI46_09395 0.73 -0.5 2,002,020 - IAI46_09395 0.73 -1.3 2,002,020 - IAI46_09395 0.73 +0.6 2,002,064 + +1.4 2,002,064 + -0.8 2,002,064 + +0.7 2,002,065 - -0.9 2,002,073 - -0.3 2,002,085 + -0.4 2,002,086 - -0.6 2,002,205 + IAI46_09400 0.47 +1.1 2,002,211 + IAI46_09400 0.49 +0.7 2,002,212 - IAI46_09400 0.49 +1.5 2,002,317 + IAI46_09400 0.84 -0.3 2,002,317 + IAI46_09400 0.84 +1.8 2,002,318 - IAI46_09400 0.84 -0.8 2,002,377 + +1.1 2,002,437 + IAI46_09405 0.14 -0.1 2,002,547 - IAI46_09405 0.36 +0.9 2,002,551 - IAI46_09405 0.37 -0.2
Or see this region's nucleotide sequence