Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_07620 and IAI46_07625 are separated by 14 nucleotides IAI46_07625 and IAI46_07630 are separated by 140 nucleotides IAI46_07630 and IAI46_07635 overlap by 4 nucleotides
IAI46_07620: IAI46_07620 - cytochrome b/b6 domain-containing protein, at 1,608,401 to 1,609,009
_07620
IAI46_07625: IAI46_07625 - hypothetical protein, at 1,609,024 to 1,609,650
_07625
IAI46_07630: IAI46_07630 - heavy metal response regulator transcription factor, at 1,609,791 to 1,610,462
_07630
IAI46_07635: IAI46_07635 - heavy metal sensor histidine kinase, at 1,610,459 to 1,611,883
_07635
Position (kb)
1609
1610
1611 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1608.904 kb on - strand, within IAI46_07620 at 1608.950 kb on - strand at 1609.026 kb on - strand at 1609.026 kb on - strand at 1609.026 kb on - strand at 1609.026 kb on - strand at 1609.086 kb on + strand at 1609.114 kb on - strand, within IAI46_07625 at 1609.420 kb on - strand, within IAI46_07625 at 1609.621 kb on + strand at 1609.650 kb on + strand at 1609.650 kb on + strand at 1609.650 kb on + strand at 1609.728 kb on - strand at 1609.728 kb on - strand at 1609.758 kb on + strand at 1609.759 kb on - strand at 1609.761 kb on + strand at 1609.798 kb on + strand at 1609.799 kb on - strand at 1609.799 kb on - strand at 1609.834 kb on - strand at 1609.834 kb on - strand at 1609.864 kb on - strand, within IAI46_07630 at 1609.883 kb on + strand, within IAI46_07630 at 1609.884 kb on - strand, within IAI46_07630 at 1609.945 kb on + strand, within IAI46_07630 at 1609.946 kb on - strand, within IAI46_07630 at 1610.087 kb on + strand, within IAI46_07630 at 1610.087 kb on + strand, within IAI46_07630 at 1610.150 kb on - strand, within IAI46_07630 at 1610.166 kb on + strand, within IAI46_07630 at 1610.167 kb on - strand, within IAI46_07630 at 1610.170 kb on + strand, within IAI46_07630 at 1610.170 kb on + strand, within IAI46_07630 at 1610.170 kb on + strand, within IAI46_07630 at 1610.170 kb on + strand, within IAI46_07630 at 1610.170 kb on + strand, within IAI46_07630 at 1610.171 kb on - strand, within IAI46_07630 at 1610.171 kb on - strand, within IAI46_07630 at 1610.204 kb on + strand, within IAI46_07630 at 1610.252 kb on + strand, within IAI46_07630 at 1610.290 kb on + strand, within IAI46_07630 at 1610.290 kb on + strand, within IAI46_07630 at 1610.290 kb on + strand, within IAI46_07630 at 1610.291 kb on - strand, within IAI46_07630 at 1610.291 kb on - strand, within IAI46_07630 at 1610.568 kb on - strand at 1610.568 kb on - strand at 1610.630 kb on + strand, within IAI46_07635 at 1610.630 kb on + strand, within IAI46_07635 at 1610.630 kb on + strand, within IAI46_07635 at 1610.630 kb on + strand, within IAI46_07635 at 1611.197 kb on + strand, within IAI46_07635 at 1611.197 kb on + strand, within IAI46_07635 at 1611.353 kb on - strand, within IAI46_07635 at 1611.379 kb on - strand, within IAI46_07635
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 1,608,904 - IAI46_07620 0.83 -1.2 1,608,950 - +0.2 1,609,026 - -0.2 1,609,026 - +0.5 1,609,026 - +0.6 1,609,026 - -0.4 1,609,086 + -0.1 1,609,114 - IAI46_07625 0.14 -1.2 1,609,420 - IAI46_07625 0.63 -0.4 1,609,621 + -1.0 1,609,650 + +0.4 1,609,650 + +1.0 1,609,650 + +1.2 1,609,728 - +0.5 1,609,728 - +0.1 1,609,758 + +0.7 1,609,759 - -0.3 1,609,761 + +0.6 1,609,798 + -1.0 1,609,799 - +1.1 1,609,799 - -0.3 1,609,834 - -0.7 1,609,834 - +0.6 1,609,864 - IAI46_07630 0.11 -0.3 1,609,883 + IAI46_07630 0.14 -0.6 1,609,884 - IAI46_07630 0.14 +0.2 1,609,945 + IAI46_07630 0.23 +0.2 1,609,946 - IAI46_07630 0.23 -0.4 1,610,087 + IAI46_07630 0.44 +0.2 1,610,087 + IAI46_07630 0.44 +0.4 1,610,150 - IAI46_07630 0.53 -0.8 1,610,166 + IAI46_07630 0.56 -0.1 1,610,167 - IAI46_07630 0.56 +1.0 1,610,170 + IAI46_07630 0.56 +0.4 1,610,170 + IAI46_07630 0.56 +0.3 1,610,170 + IAI46_07630 0.56 +0.1 1,610,170 + IAI46_07630 0.56 +0.7 1,610,170 + IAI46_07630 0.56 +0.7 1,610,171 - IAI46_07630 0.57 -1.5 1,610,171 - IAI46_07630 0.57 +0.7 1,610,204 + IAI46_07630 0.61 +0.5 1,610,252 + IAI46_07630 0.69 -0.1 1,610,290 + IAI46_07630 0.74 -1.9 1,610,290 + IAI46_07630 0.74 +1.0 1,610,290 + IAI46_07630 0.74 +0.5 1,610,291 - IAI46_07630 0.74 -0.1 1,610,291 - IAI46_07630 0.74 -0.2 1,610,568 - -1.7 1,610,568 - +1.2 1,610,630 + IAI46_07635 0.12 -0.1 1,610,630 + IAI46_07635 0.12 -1.8 1,610,630 + IAI46_07635 0.12 +1.3 1,610,630 + IAI46_07635 0.12 +2.3 1,611,197 + IAI46_07635 0.52 -1.6 1,611,197 + IAI46_07635 0.52 +1.3 1,611,353 - IAI46_07635 0.63 -0.3 1,611,379 - IAI46_07635 0.65 +1.2
Or see this region's nucleotide sequence