Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_06730 and IAI46_06735 are separated by 190 nucleotides IAI46_06735 and IAI46_06740 are separated by 62 nucleotides IAI46_06740 and IAI46_06745 are separated by 161 nucleotides
IAI46_06730: IAI46_06730 - O-antigen ligase C-terminal domain-containing protein, at 1,429,970 to 1,431,676
_06730
IAI46_06735: IAI46_06735 - LuxR family transcriptional regulator, at 1,431,867 to 1,432,424
_06735
IAI46_06740: IAI46_06740 - hypothetical protein, at 1,432,487 to 1,432,657
_06740
IAI46_06745: IAI46_06745 - arylamine N-acetyltransferase, at 1,432,819 to 1,433,580
_06745
Position (kb)
1431
1432
1433 Strain fitness (log2 ratio)
-1
0
1
2 at 1430.914 kb on - strand, within IAI46_06730 at 1430.970 kb on + strand, within IAI46_06730 at 1430.971 kb on - strand, within IAI46_06730 at 1431.091 kb on + strand, within IAI46_06730 at 1431.165 kb on - strand, within IAI46_06730 at 1431.174 kb on - strand, within IAI46_06730 at 1431.264 kb on + strand, within IAI46_06730 at 1431.345 kb on + strand, within IAI46_06730 at 1431.346 kb on - strand, within IAI46_06730 at 1431.507 kb on - strand at 1431.528 kb on - strand at 1431.575 kb on - strand at 1431.582 kb on - strand at 1431.596 kb on + strand at 1431.596 kb on + strand at 1431.597 kb on - strand at 1431.634 kb on - strand at 1431.684 kb on - strand at 1431.689 kb on + strand at 1431.689 kb on + strand at 1431.689 kb on + strand at 1431.690 kb on - strand at 1431.691 kb on + strand at 1431.691 kb on + strand at 1431.691 kb on + strand at 1431.692 kb on - strand at 1431.700 kb on + strand at 1431.701 kb on - strand at 1431.748 kb on + strand at 1431.748 kb on + strand at 1431.749 kb on - strand at 1431.749 kb on - strand at 1431.749 kb on - strand at 1431.749 kb on - strand at 1431.749 kb on - strand at 1431.749 kb on - strand at 1431.753 kb on - strand at 1431.756 kb on + strand at 1431.757 kb on - strand at 1431.814 kb on + strand at 1431.827 kb on - strand at 1431.917 kb on - strand at 1431.946 kb on - strand, within IAI46_06735 at 1432.009 kb on + strand, within IAI46_06735 at 1432.128 kb on + strand, within IAI46_06735 at 1432.129 kb on - strand, within IAI46_06735 at 1432.199 kb on - strand, within IAI46_06735 at 1432.279 kb on + strand, within IAI46_06735 at 1432.376 kb on - strand at 1432.379 kb on + strand at 1432.540 kb on + strand, within IAI46_06740 at 1432.541 kb on - strand, within IAI46_06740 at 1432.541 kb on - strand, within IAI46_06740 at 1432.563 kb on - strand, within IAI46_06740 at 1432.623 kb on + strand, within IAI46_06740 at 1432.698 kb on + strand at 1432.710 kb on + strand at 1432.710 kb on + strand at 1432.750 kb on + strand at 1432.750 kb on + strand at 1432.750 kb on + strand at 1432.750 kb on + strand at 1432.751 kb on - strand at 1432.751 kb on - strand at 1432.751 kb on - strand at 1432.751 kb on - strand at 1432.751 kb on - strand at 1432.754 kb on + strand at 1432.754 kb on + strand at 1432.754 kb on + strand at 1432.755 kb on - strand at 1432.755 kb on - strand at 1432.755 kb on - strand at 1432.755 kb on - strand at 1432.771 kb on - strand at 1432.771 kb on - strand at 1432.789 kb on + strand at 1432.789 kb on + strand at 1432.812 kb on + strand at 1432.812 kb on + strand at 1432.812 kb on + strand at 1432.812 kb on + strand at 1432.812 kb on + strand at 1432.812 kb on + strand at 1432.813 kb on - strand at 1433.117 kb on + strand, within IAI46_06745 at 1433.117 kb on + strand, within IAI46_06745 at 1433.120 kb on + strand, within IAI46_06745 at 1433.120 kb on + strand, within IAI46_06745 at 1433.251 kb on + strand, within IAI46_06745 at 1433.252 kb on - strand, within IAI46_06745 at 1433.319 kb on + strand, within IAI46_06745 at 1433.379 kb on - strand, within IAI46_06745
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 1,430,914 - IAI46_06730 0.55 -0.7 1,430,970 + IAI46_06730 0.59 -1.0 1,430,971 - IAI46_06730 0.59 -0.4 1,431,091 + IAI46_06730 0.66 +0.7 1,431,165 - IAI46_06730 0.70 -1.4 1,431,174 - IAI46_06730 0.71 +2.1 1,431,264 + IAI46_06730 0.76 +0.6 1,431,345 + IAI46_06730 0.81 +0.3 1,431,346 - IAI46_06730 0.81 -0.6 1,431,507 - +0.4 1,431,528 - -0.4 1,431,575 - +0.2 1,431,582 - -0.6 1,431,596 + -0.2 1,431,596 + -0.3 1,431,597 - +0.3 1,431,634 - -0.8 1,431,684 - -0.3 1,431,689 + +1.7 1,431,689 + +0.7 1,431,689 + +0.3 1,431,690 - -0.1 1,431,691 + +1.4 1,431,691 + -0.1 1,431,691 + +1.3 1,431,692 - -0.5 1,431,700 + +0.1 1,431,701 - +0.4 1,431,748 + -0.2 1,431,748 + +0.9 1,431,749 - +0.4 1,431,749 - +0.5 1,431,749 - +0.3 1,431,749 - +2.6 1,431,749 - -0.5 1,431,749 - -0.4 1,431,753 - -0.3 1,431,756 + +0.5 1,431,757 - +0.3 1,431,814 + +0.9 1,431,827 - +1.4 1,431,917 - -0.7 1,431,946 - IAI46_06735 0.14 -0.3 1,432,009 + IAI46_06735 0.25 -0.6 1,432,128 + IAI46_06735 0.47 +0.2 1,432,129 - IAI46_06735 0.47 -1.4 1,432,199 - IAI46_06735 0.59 +0.6 1,432,279 + IAI46_06735 0.74 -1.1 1,432,376 - -0.0 1,432,379 + +1.7 1,432,540 + IAI46_06740 0.31 +0.5 1,432,541 - IAI46_06740 0.32 +0.2 1,432,541 - IAI46_06740 0.32 +0.1 1,432,563 - IAI46_06740 0.44 -0.6 1,432,623 + IAI46_06740 0.80 +1.0 1,432,698 + +0.1 1,432,710 + +1.0 1,432,710 + -0.9 1,432,750 + +0.6 1,432,750 + -1.5 1,432,750 + +0.5 1,432,750 + +0.7 1,432,751 - -0.6 1,432,751 - -0.8 1,432,751 - -0.1 1,432,751 - -0.4 1,432,751 - -0.2 1,432,754 + -0.6 1,432,754 + +0.2 1,432,754 + -0.9 1,432,755 - +0.3 1,432,755 - -0.0 1,432,755 - -1.0 1,432,755 - +0.0 1,432,771 - +1.2 1,432,771 - -0.3 1,432,789 + -0.1 1,432,789 + +0.7 1,432,812 + +0.2 1,432,812 + +1.0 1,432,812 + -0.4 1,432,812 + +0.6 1,432,812 + -0.8 1,432,812 + +0.3 1,432,813 - +0.9 1,433,117 + IAI46_06745 0.39 +0.1 1,433,117 + IAI46_06745 0.39 +1.1 1,433,120 + IAI46_06745 0.40 +0.4 1,433,120 + IAI46_06745 0.40 +0.8 1,433,251 + IAI46_06745 0.57 +1.3 1,433,252 - IAI46_06745 0.57 +0.1 1,433,319 + IAI46_06745 0.66 +0.1 1,433,379 - IAI46_06745 0.73 -0.1
Or see this region's nucleotide sequence