Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_06645 and IAI46_06650 are separated by 80 nucleotides IAI46_06650 and IAI46_06655 are separated by 65 nucleotides IAI46_06655 and IAI46_06660 are separated by 11 nucleotides
IAI46_06645: IAI46_06645 - D-2-hydroxyacid dehydrogenase family protein, at 1,415,471 to 1,416,430
_06645
IAI46_06650: IAI46_06650 - tRNA dihydrouridine(16) synthase DusC, at 1,416,511 to 1,417,440
_06650
IAI46_06655: IAI46_06655 - hypothetical protein, at 1,417,506 to 1,417,955
_06655
IAI46_06660: IAI46_06660 - winged helix-turn-helix domain-containing protein, at 1,417,967 to 1,418,785
_06660
Position (kb)
1416
1417
1418 Strain fitness (log2 ratio)
-2
-1
0
1 at 1415.837 kb on - strand, within IAI46_06645 at 1416.052 kb on + strand, within IAI46_06645 at 1416.099 kb on + strand, within IAI46_06645 at 1416.335 kb on + strand at 1416.335 kb on + strand at 1416.349 kb on + strand at 1416.350 kb on - strand at 1416.354 kb on - strand at 1416.429 kb on - strand at 1416.440 kb on - strand at 1416.468 kb on + strand at 1416.478 kb on + strand at 1416.479 kb on - strand at 1416.518 kb on + strand at 1416.519 kb on - strand at 1416.586 kb on + strand at 1416.728 kb on - strand, within IAI46_06650 at 1416.779 kb on - strand, within IAI46_06650 at 1416.869 kb on - strand, within IAI46_06650 at 1417.021 kb on - strand, within IAI46_06650 at 1417.036 kb on + strand, within IAI46_06650 at 1417.312 kb on + strand, within IAI46_06650 at 1417.313 kb on - strand, within IAI46_06650 at 1417.349 kb on + strand at 1417.350 kb on - strand at 1417.350 kb on - strand at 1417.350 kb on - strand at 1417.353 kb on + strand at 1417.360 kb on + strand at 1417.405 kb on - strand at 1417.416 kb on + strand at 1417.482 kb on - strand at 1417.505 kb on - strand at 1417.556 kb on + strand, within IAI46_06655 at 1417.556 kb on + strand, within IAI46_06655 at 1417.557 kb on - strand, within IAI46_06655 at 1417.557 kb on - strand, within IAI46_06655 at 1417.557 kb on - strand, within IAI46_06655 at 1417.570 kb on - strand, within IAI46_06655 at 1417.579 kb on - strand, within IAI46_06655 at 1417.584 kb on + strand, within IAI46_06655 at 1417.584 kb on + strand, within IAI46_06655 at 1417.585 kb on - strand, within IAI46_06655 at 1417.597 kb on - strand, within IAI46_06655 at 1417.619 kb on + strand, within IAI46_06655 at 1417.620 kb on - strand, within IAI46_06655 at 1417.722 kb on - strand, within IAI46_06655 at 1417.727 kb on - strand, within IAI46_06655 at 1417.844 kb on - strand, within IAI46_06655 at 1417.947 kb on - strand at 1418.110 kb on + strand, within IAI46_06660 at 1418.111 kb on - strand, within IAI46_06660 at 1418.115 kb on - strand, within IAI46_06660
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 1,415,837 - IAI46_06645 0.38 +0.9 1,416,052 + IAI46_06645 0.61 -0.2 1,416,099 + IAI46_06645 0.65 +0.7 1,416,335 + -0.4 1,416,335 + -0.1 1,416,349 + -1.1 1,416,350 - +0.5 1,416,354 - -0.2 1,416,429 - +0.3 1,416,440 - -0.1 1,416,468 + -0.1 1,416,478 + +0.9 1,416,479 - -1.6 1,416,518 + +1.7 1,416,519 - -0.4 1,416,586 + +0.0 1,416,728 - IAI46_06650 0.23 +0.6 1,416,779 - IAI46_06650 0.29 -1.8 1,416,869 - IAI46_06650 0.38 +0.7 1,417,021 - IAI46_06650 0.55 -0.4 1,417,036 + IAI46_06650 0.56 +1.5 1,417,312 + IAI46_06650 0.86 -1.4 1,417,313 - IAI46_06650 0.86 +0.4 1,417,349 + -0.5 1,417,350 - -0.4 1,417,350 - -0.7 1,417,350 - +1.0 1,417,353 + -0.4 1,417,360 + -0.6 1,417,405 - -1.3 1,417,416 + -2.1 1,417,482 - -0.0 1,417,505 - -1.4 1,417,556 + IAI46_06655 0.11 -0.7 1,417,556 + IAI46_06655 0.11 +0.4 1,417,557 - IAI46_06655 0.11 +0.9 1,417,557 - IAI46_06655 0.11 -0.4 1,417,557 - IAI46_06655 0.11 -1.1 1,417,570 - IAI46_06655 0.14 +0.7 1,417,579 - IAI46_06655 0.16 +0.1 1,417,584 + IAI46_06655 0.17 -0.1 1,417,584 + IAI46_06655 0.17 -0.2 1,417,585 - IAI46_06655 0.18 +0.9 1,417,597 - IAI46_06655 0.20 -1.5 1,417,619 + IAI46_06655 0.25 -1.3 1,417,620 - IAI46_06655 0.25 -0.4 1,417,722 - IAI46_06655 0.48 +0.7 1,417,727 - IAI46_06655 0.49 +0.0 1,417,844 - IAI46_06655 0.75 +0.4 1,417,947 - +0.3 1,418,110 + IAI46_06660 0.17 -1.0 1,418,111 - IAI46_06660 0.18 -0.5 1,418,115 - IAI46_06660 0.18 +1.0
Or see this region's nucleotide sequence