Experiment: Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_04460 and IAI46_04465 are separated by 101 nucleotides IAI46_04465 and IAI46_04470 are separated by 75 nucleotides
IAI46_04460: IAI46_04460 - condensation protein, at 954,519 to 955,865
_04460
IAI46_04465: IAI46_04465 - amino acid adenylation domain-containing protein, at 955,967 to 959,062
_04465
IAI46_04470: IAI46_04470 - glutamate racemase, at 959,138 to 960,739
_04470
Position (kb) 955
956
957
958
959
960 Strain fitness (log2 ratio) -2
-1
0
1
2 at 955.005 kb on + strand, within IAI46_04460 at 955.006 kb on - strand, within IAI46_04460 at 955.006 kb on - strand, within IAI46_04460 at 955.007 kb on + strand, within IAI46_04460 at 955.007 kb on + strand, within IAI46_04460 at 955.007 kb on + strand, within IAI46_04460 at 955.083 kb on + strand, within IAI46_04460 at 955.084 kb on - strand, within IAI46_04460 at 955.131 kb on + strand, within IAI46_04460 at 955.131 kb on + strand, within IAI46_04460 at 955.132 kb on - strand, within IAI46_04460 at 955.182 kb on + strand, within IAI46_04460 at 955.182 kb on + strand, within IAI46_04460 at 955.183 kb on - strand, within IAI46_04460 at 955.259 kb on + strand, within IAI46_04460 at 955.260 kb on - strand, within IAI46_04460 at 955.340 kb on + strand, within IAI46_04460 at 955.341 kb on - strand, within IAI46_04460 at 955.341 kb on - strand, within IAI46_04460 at 955.404 kb on - strand, within IAI46_04460 at 955.424 kb on + strand, within IAI46_04460 at 955.425 kb on - strand, within IAI46_04460 at 955.425 kb on - strand, within IAI46_04460 at 955.592 kb on + strand, within IAI46_04460 at 955.640 kb on + strand, within IAI46_04460 at 955.640 kb on + strand, within IAI46_04460 at 955.641 kb on - strand, within IAI46_04460 at 955.651 kb on + strand, within IAI46_04460 at 955.738 kb on - strand at 955.738 kb on - strand at 955.773 kb on + strand at 955.773 kb on + strand at 955.774 kb on - strand at 955.883 kb on + strand at 955.884 kb on - strand at 955.884 kb on - strand at 955.884 kb on - strand at 955.910 kb on + strand at 955.911 kb on - strand at 955.912 kb on + strand at 955.912 kb on + strand at 955.913 kb on - strand at 955.913 kb on - strand at 955.931 kb on - strand at 955.955 kb on - strand at 956.015 kb on + strand at 956.054 kb on - strand at 956.341 kb on + strand, within IAI46_04465 at 956.341 kb on + strand, within IAI46_04465 at 956.341 kb on + strand, within IAI46_04465 at 956.341 kb on + strand, within IAI46_04465 at 956.341 kb on + strand, within IAI46_04465 at 956.342 kb on - strand, within IAI46_04465 at 956.342 kb on - strand, within IAI46_04465 at 956.342 kb on - strand, within IAI46_04465 at 956.412 kb on + strand, within IAI46_04465 at 956.413 kb on - strand, within IAI46_04465 at 956.462 kb on + strand, within IAI46_04465 at 956.479 kb on + strand, within IAI46_04465 at 956.479 kb on + strand, within IAI46_04465 at 956.480 kb on - strand, within IAI46_04465 at 956.480 kb on - strand, within IAI46_04465 at 956.547 kb on + strand, within IAI46_04465 at 956.547 kb on + strand, within IAI46_04465 at 956.576 kb on - strand, within IAI46_04465 at 956.592 kb on + strand, within IAI46_04465 at 956.592 kb on + strand, within IAI46_04465 at 956.592 kb on + strand, within IAI46_04465 at 956.593 kb on - strand, within IAI46_04465 at 956.593 kb on - strand, within IAI46_04465 at 956.595 kb on + strand, within IAI46_04465 at 956.595 kb on + strand, within IAI46_04465 at 956.596 kb on - strand, within IAI46_04465 at 956.612 kb on - strand, within IAI46_04465 at 956.672 kb on + strand, within IAI46_04465 at 956.691 kb on + strand, within IAI46_04465 at 956.691 kb on + strand, within IAI46_04465 at 956.773 kb on + strand, within IAI46_04465 at 956.774 kb on - strand, within IAI46_04465 at 956.774 kb on - strand, within IAI46_04465 at 956.778 kb on + strand, within IAI46_04465 at 956.779 kb on - strand, within IAI46_04465 at 956.779 kb on - strand, within IAI46_04465 at 956.805 kb on + strand, within IAI46_04465 at 956.805 kb on + strand, within IAI46_04465 at 956.806 kb on - strand, within IAI46_04465 at 956.806 kb on - strand, within IAI46_04465 at 956.806 kb on - strand, within IAI46_04465 at 956.943 kb on + strand, within IAI46_04465 at 956.943 kb on + strand, within IAI46_04465 at 956.944 kb on - strand, within IAI46_04465 at 956.944 kb on - strand, within IAI46_04465 at 956.944 kb on - strand, within IAI46_04465 at 956.944 kb on - strand, within IAI46_04465 at 957.001 kb on + strand, within IAI46_04465 at 957.002 kb on - strand, within IAI46_04465 at 957.160 kb on + strand, within IAI46_04465 at 957.160 kb on + strand, within IAI46_04465 at 957.161 kb on - strand, within IAI46_04465 at 957.161 kb on - strand, within IAI46_04465 at 957.161 kb on - strand, within IAI46_04465 at 957.257 kb on - strand, within IAI46_04465 at 957.295 kb on - strand, within IAI46_04465 at 957.299 kb on - strand, within IAI46_04465 at 957.299 kb on - strand, within IAI46_04465 at 957.300 kb on + strand, within IAI46_04465 at 957.300 kb on + strand, within IAI46_04465 at 957.301 kb on - strand, within IAI46_04465 at 957.306 kb on + strand, within IAI46_04465 at 957.306 kb on + strand, within IAI46_04465 at 957.306 kb on + strand, within IAI46_04465 at 957.307 kb on - strand, within IAI46_04465 at 957.309 kb on + strand, within IAI46_04465 at 957.310 kb on - strand, within IAI46_04465 at 957.310 kb on - strand, within IAI46_04465 at 957.310 kb on - strand, within IAI46_04465 at 957.403 kb on + strand, within IAI46_04465 at 957.437 kb on + strand, within IAI46_04465 at 957.437 kb on + strand, within IAI46_04465 at 957.438 kb on - strand, within IAI46_04465 at 957.438 kb on - strand, within IAI46_04465 at 957.471 kb on + strand, within IAI46_04465 at 957.479 kb on - strand, within IAI46_04465 at 957.518 kb on - strand, within IAI46_04465 at 957.518 kb on - strand, within IAI46_04465 at 957.551 kb on + strand, within IAI46_04465 at 957.551 kb on + strand, within IAI46_04465 at 957.552 kb on - strand, within IAI46_04465 at 957.576 kb on + strand, within IAI46_04465 at 957.577 kb on - strand, within IAI46_04465 at 957.577 kb on - strand, within IAI46_04465 at 957.577 kb on - strand, within IAI46_04465 at 957.671 kb on + strand, within IAI46_04465 at 957.671 kb on + strand, within IAI46_04465 at 957.671 kb on + strand, within IAI46_04465 at 957.671 kb on + strand, within IAI46_04465 at 957.741 kb on + strand, within IAI46_04465 at 957.747 kb on + strand, within IAI46_04465 at 957.783 kb on + strand, within IAI46_04465 at 957.849 kb on - strand, within IAI46_04465 at 958.002 kb on + strand, within IAI46_04465 at 958.091 kb on + strand, within IAI46_04465 at 958.204 kb on - strand, within IAI46_04465 at 958.222 kb on + strand, within IAI46_04465 at 958.222 kb on + strand, within IAI46_04465 at 958.222 kb on + strand, within IAI46_04465 at 958.222 kb on + strand, within IAI46_04465 at 958.313 kb on - strand, within IAI46_04465 at 958.385 kb on + strand, within IAI46_04465 at 958.386 kb on - strand, within IAI46_04465 at 958.438 kb on + strand, within IAI46_04465 at 958.490 kb on + strand, within IAI46_04465 at 958.616 kb on - strand, within IAI46_04465 at 958.668 kb on + strand, within IAI46_04465 at 958.669 kb on - strand, within IAI46_04465 at 958.717 kb on + strand, within IAI46_04465 at 958.758 kb on + strand at 958.759 kb on - strand at 958.759 kb on - strand at 958.759 kb on - strand at 958.877 kb on - strand at 958.878 kb on + strand at 958.878 kb on + strand at 958.878 kb on + strand at 958.879 kb on - strand at 958.879 kb on - strand at 958.879 kb on - strand at 958.879 kb on - strand at 958.879 kb on - strand at 958.902 kb on + strand at 959.028 kb on + strand at 959.028 kb on + strand at 959.028 kb on + strand at 959.029 kb on - strand at 959.029 kb on - strand at 959.048 kb on + strand at 959.049 kb on - strand at 959.065 kb on + strand at 959.099 kb on - strand at 959.099 kb on - strand at 959.137 kb on - strand at 959.165 kb on + strand at 959.165 kb on + strand at 959.165 kb on + strand at 959.166 kb on - strand at 959.166 kb on - strand at 959.166 kb on - strand at 959.246 kb on + strand at 959.246 kb on + strand at 959.246 kb on + strand at 959.246 kb on + strand at 959.246 kb on + strand at 959.247 kb on - strand at 959.247 kb on - strand at 959.247 kb on - strand at 959.284 kb on + strand at 959.285 kb on - strand at 959.285 kb on - strand at 959.285 kb on - strand at 959.288 kb on + strand at 959.332 kb on + strand, within IAI46_04470 at 959.471 kb on - strand, within IAI46_04470 at 959.514 kb on + strand, within IAI46_04470 at 959.515 kb on - strand, within IAI46_04470 at 959.720 kb on - strand, within IAI46_04470 at 959.804 kb on + strand, within IAI46_04470 at 959.804 kb on + strand, within IAI46_04470 at 959.804 kb on + strand, within IAI46_04470 at 959.805 kb on - strand, within IAI46_04470 at 959.807 kb on + strand, within IAI46_04470
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum potassium sulfate dodecahydrate 1 mM, anaerobic remove 955,005 + IAI46_04460 0.36 +0.9 955,006 - IAI46_04460 0.36 +0.9 955,006 - IAI46_04460 0.36 +0.1 955,007 + IAI46_04460 0.36 -1.9 955,007 + IAI46_04460 0.36 +0.2 955,007 + IAI46_04460 0.36 +0.2 955,083 + IAI46_04460 0.42 -0.2 955,084 - IAI46_04460 0.42 -0.6 955,131 + IAI46_04460 0.45 +0.2 955,131 + IAI46_04460 0.45 -0.6 955,132 - IAI46_04460 0.46 -0.3 955,182 + IAI46_04460 0.49 -0.2 955,182 + IAI46_04460 0.49 -0.9 955,183 - IAI46_04460 0.49 +1.4 955,259 + IAI46_04460 0.55 -0.7 955,260 - IAI46_04460 0.55 +0.1 955,340 + IAI46_04460 0.61 -0.0 955,341 - IAI46_04460 0.61 +1.0 955,341 - IAI46_04460 0.61 +0.7 955,404 - IAI46_04460 0.66 +0.9 955,424 + IAI46_04460 0.67 -0.1 955,425 - IAI46_04460 0.67 +1.0 955,425 - IAI46_04460 0.67 -0.2 955,592 + IAI46_04460 0.80 +0.2 955,640 + IAI46_04460 0.83 +0.0 955,640 + IAI46_04460 0.83 -0.1 955,641 - IAI46_04460 0.83 +0.8 955,651 + IAI46_04460 0.84 +2.1 955,738 - +0.2 955,738 - +0.6 955,773 + +0.2 955,773 + +0.5 955,774 - +0.5 955,883 + -1.3 955,884 - +0.9 955,884 - -0.3 955,884 - +0.2 955,910 + -0.7 955,911 - -0.0 955,912 + +0.7 955,912 + -0.1 955,913 - +0.3 955,913 - -0.7 955,931 - -0.0 955,955 - +1.0 956,015 + -0.5 956,054 - -0.1 956,341 + IAI46_04465 0.12 +0.6 956,341 + IAI46_04465 0.12 -0.9 956,341 + IAI46_04465 0.12 +0.1 956,341 + IAI46_04465 0.12 +1.2 956,341 + IAI46_04465 0.12 -0.6 956,342 - IAI46_04465 0.12 +0.4 956,342 - IAI46_04465 0.12 +0.2 956,342 - IAI46_04465 0.12 -0.4 956,412 + IAI46_04465 0.14 +0.2 956,413 - IAI46_04465 0.14 +0.3 956,462 + IAI46_04465 0.16 +0.8 956,479 + IAI46_04465 0.17 -0.2 956,479 + IAI46_04465 0.17 +0.0 956,480 - IAI46_04465 0.17 +0.6 956,480 - IAI46_04465 0.17 -1.6 956,547 + IAI46_04465 0.19 +0.9 956,547 + IAI46_04465 0.19 +0.0 956,576 - IAI46_04465 0.20 -0.2 956,592 + IAI46_04465 0.20 -0.3 956,592 + IAI46_04465 0.20 +0.4 956,592 + IAI46_04465 0.20 -0.3 956,593 - IAI46_04465 0.20 -0.9 956,593 - IAI46_04465 0.20 +0.7 956,595 + IAI46_04465 0.20 -0.3 956,595 + IAI46_04465 0.20 -0.0 956,596 - IAI46_04465 0.20 +0.3 956,612 - IAI46_04465 0.21 -0.8 956,672 + IAI46_04465 0.23 -0.5 956,691 + IAI46_04465 0.23 -0.3 956,691 + IAI46_04465 0.23 +0.5 956,773 + IAI46_04465 0.26 -0.1 956,774 - IAI46_04465 0.26 -0.1 956,774 - IAI46_04465 0.26 +0.2 956,778 + IAI46_04465 0.26 +0.5 956,779 - IAI46_04465 0.26 +0.4 956,779 - IAI46_04465 0.26 +0.2 956,805 + IAI46_04465 0.27 +0.6 956,805 + IAI46_04465 0.27 -0.5 956,806 - IAI46_04465 0.27 +0.6 956,806 - IAI46_04465 0.27 +0.2 956,806 - IAI46_04465 0.27 -0.4 956,943 + IAI46_04465 0.32 +0.6 956,943 + IAI46_04465 0.32 +0.1 956,944 - IAI46_04465 0.32 -0.1 956,944 - IAI46_04465 0.32 +0.0 956,944 - IAI46_04465 0.32 +0.5 956,944 - IAI46_04465 0.32 +1.5 957,001 + IAI46_04465 0.33 -0.6 957,002 - IAI46_04465 0.33 +0.2 957,160 + IAI46_04465 0.39 -0.5 957,160 + IAI46_04465 0.39 +0.3 957,161 - IAI46_04465 0.39 +0.5 957,161 - IAI46_04465 0.39 +0.4 957,161 - IAI46_04465 0.39 -1.8 957,257 - IAI46_04465 0.42 +0.3 957,295 - IAI46_04465 0.43 -0.0 957,299 - IAI46_04465 0.43 -0.1 957,299 - IAI46_04465 0.43 -0.2 957,300 + IAI46_04465 0.43 +0.6 957,300 + IAI46_04465 0.43 +0.2 957,301 - IAI46_04465 0.43 -0.7 957,306 + IAI46_04465 0.43 +1.5 957,306 + IAI46_04465 0.43 +0.6 957,306 + IAI46_04465 0.43 +0.1 957,307 - IAI46_04465 0.43 -0.2 957,309 + IAI46_04465 0.43 +0.6 957,310 - IAI46_04465 0.43 +0.5 957,310 - IAI46_04465 0.43 +1.2 957,310 - IAI46_04465 0.43 +0.1 957,403 + IAI46_04465 0.46 -0.6 957,437 + IAI46_04465 0.47 +0.7 957,437 + IAI46_04465 0.47 +0.7 957,438 - IAI46_04465 0.48 +1.3 957,438 - IAI46_04465 0.48 +0.9 957,471 + IAI46_04465 0.49 -0.2 957,479 - IAI46_04465 0.49 -0.1 957,518 - IAI46_04465 0.50 -0.5 957,518 - IAI46_04465 0.50 +0.5 957,551 + IAI46_04465 0.51 -0.2 957,551 + IAI46_04465 0.51 +0.9 957,552 - IAI46_04465 0.51 +0.9 957,576 + IAI46_04465 0.52 +0.8 957,577 - IAI46_04465 0.52 +0.4 957,577 - IAI46_04465 0.52 -0.6 957,577 - IAI46_04465 0.52 +1.2 957,671 + IAI46_04465 0.55 +0.6 957,671 + IAI46_04465 0.55 -0.9 957,671 + IAI46_04465 0.55 +1.4 957,671 + IAI46_04465 0.55 +0.6 957,741 + IAI46_04465 0.57 -0.6 957,747 + IAI46_04465 0.57 -2.0 957,783 + IAI46_04465 0.59 +0.3 957,849 - IAI46_04465 0.61 -0.5 958,002 + IAI46_04465 0.66 +1.5 958,091 + IAI46_04465 0.69 -0.2 958,204 - IAI46_04465 0.72 +0.7 958,222 + IAI46_04465 0.73 -0.1 958,222 + IAI46_04465 0.73 -0.4 958,222 + IAI46_04465 0.73 -0.2 958,222 + IAI46_04465 0.73 +1.1 958,313 - IAI46_04465 0.76 +0.2 958,385 + IAI46_04465 0.78 -0.1 958,386 - IAI46_04465 0.78 +0.3 958,438 + IAI46_04465 0.80 +0.0 958,490 + IAI46_04465 0.81 -0.5 958,616 - IAI46_04465 0.86 -0.1 958,668 + IAI46_04465 0.87 -0.2 958,669 - IAI46_04465 0.87 -0.1 958,717 + IAI46_04465 0.89 -0.1 958,758 + +0.1 958,759 - +0.4 958,759 - -0.3 958,759 - -0.1 958,877 - -1.2 958,878 + +0.0 958,878 + +1.1 958,878 + +0.2 958,879 - +0.1 958,879 - +0.1 958,879 - -1.3 958,879 - -0.9 958,879 - +1.1 958,902 + -0.9 959,028 + -1.1 959,028 + +1.9 959,028 + -0.0 959,029 - -0.1 959,029 - +1.9 959,048 + -1.2 959,049 - +1.1 959,065 + +0.3 959,099 - +0.0 959,099 - +0.0 959,137 - -0.8 959,165 + +0.3 959,165 + +0.9 959,165 + -0.9 959,166 - -1.5 959,166 - +0.5 959,166 - -0.1 959,246 + -0.8 959,246 + -0.1 959,246 + -0.2 959,246 + +0.6 959,246 + +0.3 959,247 - -0.8 959,247 - -0.8 959,247 - -0.1 959,284 + -0.3 959,285 - +0.5 959,285 - -0.3 959,285 - +0.4 959,288 + +0.2 959,332 + IAI46_04470 0.12 +0.6 959,471 - IAI46_04470 0.21 +0.3 959,514 + IAI46_04470 0.23 +0.2 959,515 - IAI46_04470 0.24 -0.2 959,720 - IAI46_04470 0.36 -0.1 959,804 + IAI46_04470 0.42 +0.3 959,804 + IAI46_04470 0.42 -2.1 959,804 + IAI46_04470 0.42 +0.0 959,805 - IAI46_04470 0.42 +0.1 959,807 + IAI46_04470 0.42 +0.1
Or see this region's nucleotide sequence