Experiment: L-Tryptophan (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS02155 and ABID97_RS02160 overlap by 4 nucleotides ABID97_RS02160 and ABID97_RS02165 are separated by 96 nucleotides
ABID97_RS02155: ABID97_RS02155 - glycosyltransferase family 4 protein, at 434,017 to 435,243
_RS02155
ABID97_RS02160: ABID97_RS02160 - UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing), at 435,240 to 436,331
_RS02160
ABID97_RS02165: ABID97_RS02165 - glycosyltransferase, at 436,428 to 437,525
_RS02165
Position (kb) 435
436
437 Strain fitness (log2 ratio) -1
0
1
2
3 at 434.259 kb on - strand, within ABID97_RS02155 at 434.259 kb on - strand, within ABID97_RS02155 at 434.321 kb on + strand, within ABID97_RS02155 at 434.322 kb on - strand, within ABID97_RS02155 at 434.322 kb on - strand, within ABID97_RS02155 at 434.386 kb on + strand, within ABID97_RS02155 at 434.386 kb on + strand, within ABID97_RS02155 at 434.387 kb on - strand, within ABID97_RS02155 at 434.387 kb on - strand, within ABID97_RS02155 at 434.387 kb on - strand, within ABID97_RS02155 at 434.387 kb on - strand, within ABID97_RS02155 at 434.387 kb on - strand, within ABID97_RS02155 at 434.387 kb on - strand, within ABID97_RS02155 at 434.387 kb on - strand, within ABID97_RS02155 at 434.540 kb on + strand, within ABID97_RS02155 at 434.540 kb on + strand, within ABID97_RS02155 at 434.540 kb on + strand, within ABID97_RS02155 at 434.541 kb on - strand, within ABID97_RS02155 at 434.655 kb on + strand, within ABID97_RS02155 at 434.864 kb on - strand, within ABID97_RS02155 at 434.864 kb on - strand, within ABID97_RS02155 at 434.864 kb on - strand, within ABID97_RS02155 at 434.903 kb on + strand, within ABID97_RS02155 at 434.904 kb on - strand, within ABID97_RS02155 at 434.904 kb on - strand, within ABID97_RS02155 at 434.904 kb on - strand, within ABID97_RS02155 at 434.904 kb on - strand, within ABID97_RS02155 at 434.904 kb on - strand, within ABID97_RS02155 at 434.908 kb on - strand, within ABID97_RS02155 at 434.908 kb on - strand, within ABID97_RS02155 at 435.024 kb on - strand, within ABID97_RS02155 at 435.024 kb on - strand, within ABID97_RS02155 at 435.109 kb on + strand, within ABID97_RS02155 at 435.176 kb on + strand at 435.176 kb on + strand at 435.176 kb on + strand at 435.177 kb on - strand at 435.218 kb on + strand at 435.323 kb on + strand at 435.399 kb on + strand, within ABID97_RS02160 at 435.828 kb on + strand, within ABID97_RS02160 at 435.828 kb on + strand, within ABID97_RS02160 at 435.828 kb on + strand, within ABID97_RS02160 at 435.864 kb on - strand, within ABID97_RS02160 at 435.864 kb on - strand, within ABID97_RS02160 at 435.864 kb on - strand, within ABID97_RS02160 at 435.868 kb on - strand, within ABID97_RS02160 at 435.868 kb on - strand, within ABID97_RS02160 at 436.041 kb on - strand, within ABID97_RS02160 at 436.041 kb on - strand, within ABID97_RS02160 at 436.041 kb on - strand, within ABID97_RS02160 at 436.041 kb on - strand, within ABID97_RS02160 at 436.051 kb on + strand, within ABID97_RS02160 at 436.173 kb on - strand, within ABID97_RS02160 at 436.292 kb on + strand at 436.292 kb on + strand at 436.333 kb on + strand at 436.333 kb on + strand at 436.380 kb on + strand at 436.460 kb on - strand at 436.612 kb on - strand, within ABID97_RS02165 at 436.638 kb on + strand, within ABID97_RS02165 at 436.656 kb on + strand, within ABID97_RS02165 at 436.656 kb on + strand, within ABID97_RS02165 at 436.656 kb on + strand, within ABID97_RS02165 at 436.657 kb on - strand, within ABID97_RS02165 at 436.657 kb on - strand, within ABID97_RS02165 at 436.747 kb on + strand, within ABID97_RS02165 at 436.747 kb on + strand, within ABID97_RS02165 at 436.748 kb on - strand, within ABID97_RS02165 at 436.748 kb on - strand, within ABID97_RS02165 at 436.748 kb on - strand, within ABID97_RS02165 at 436.748 kb on - strand, within ABID97_RS02165 at 436.771 kb on - strand, within ABID97_RS02165 at 436.966 kb on + strand, within ABID97_RS02165 at 436.966 kb on + strand, within ABID97_RS02165 at 436.966 kb on + strand, within ABID97_RS02165 at 436.967 kb on - strand, within ABID97_RS02165 at 436.967 kb on - strand, within ABID97_RS02165 at 436.967 kb on - strand, within ABID97_RS02165 at 437.206 kb on + strand, within ABID97_RS02165 at 437.206 kb on + strand, within ABID97_RS02165 at 437.206 kb on + strand, within ABID97_RS02165 at 437.206 kb on + strand, within ABID97_RS02165 at 437.207 kb on - strand, within ABID97_RS02165 at 437.207 kb on - strand, within ABID97_RS02165 at 437.207 kb on - strand, within ABID97_RS02165 at 437.253 kb on + strand, within ABID97_RS02165 at 437.298 kb on + strand, within ABID97_RS02165 at 437.299 kb on - strand, within ABID97_RS02165
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (C) remove 434,259 - ABID97_RS02155 0.20 +1.1 434,259 - ABID97_RS02155 0.20 +2.4 434,321 + ABID97_RS02155 0.25 +1.1 434,322 - ABID97_RS02155 0.25 +2.1 434,322 - ABID97_RS02155 0.25 +1.5 434,386 + ABID97_RS02155 0.30 +1.8 434,386 + ABID97_RS02155 0.30 +1.6 434,387 - ABID97_RS02155 0.30 +2.2 434,387 - ABID97_RS02155 0.30 +2.0 434,387 - ABID97_RS02155 0.30 +1.7 434,387 - ABID97_RS02155 0.30 +1.7 434,387 - ABID97_RS02155 0.30 +1.4 434,387 - ABID97_RS02155 0.30 +2.4 434,387 - ABID97_RS02155 0.30 +1.6 434,540 + ABID97_RS02155 0.43 +2.6 434,540 + ABID97_RS02155 0.43 +1.7 434,540 + ABID97_RS02155 0.43 +1.2 434,541 - ABID97_RS02155 0.43 +1.8 434,655 + ABID97_RS02155 0.52 +1.8 434,864 - ABID97_RS02155 0.69 +1.7 434,864 - ABID97_RS02155 0.69 +2.0 434,864 - ABID97_RS02155 0.69 +1.9 434,903 + ABID97_RS02155 0.72 +2.8 434,904 - ABID97_RS02155 0.72 +2.7 434,904 - ABID97_RS02155 0.72 +1.5 434,904 - ABID97_RS02155 0.72 +1.6 434,904 - ABID97_RS02155 0.72 +1.9 434,904 - ABID97_RS02155 0.72 +1.7 434,908 - ABID97_RS02155 0.73 +2.0 434,908 - ABID97_RS02155 0.73 +1.4 435,024 - ABID97_RS02155 0.82 +1.8 435,024 - ABID97_RS02155 0.82 +1.4 435,109 + ABID97_RS02155 0.89 +1.8 435,176 + +1.5 435,176 + +1.8 435,176 + +1.9 435,177 - +1.5 435,218 + +2.3 435,323 + +1.0 435,399 + ABID97_RS02160 0.15 +1.5 435,828 + ABID97_RS02160 0.54 +0.6 435,828 + ABID97_RS02160 0.54 +1.6 435,828 + ABID97_RS02160 0.54 +2.2 435,864 - ABID97_RS02160 0.57 +1.5 435,864 - ABID97_RS02160 0.57 +1.1 435,864 - ABID97_RS02160 0.57 +1.4 435,868 - ABID97_RS02160 0.58 +1.8 435,868 - ABID97_RS02160 0.58 +2.2 436,041 - ABID97_RS02160 0.73 +1.6 436,041 - ABID97_RS02160 0.73 +1.3 436,041 - ABID97_RS02160 0.73 +1.5 436,041 - ABID97_RS02160 0.73 +1.7 436,051 + ABID97_RS02160 0.74 +1.8 436,173 - ABID97_RS02160 0.85 +0.8 436,292 + +2.8 436,292 + +1.7 436,333 + +0.1 436,333 + -1.1 436,380 + +0.1 436,460 - +1.1 436,612 - ABID97_RS02165 0.17 +1.7 436,638 + ABID97_RS02165 0.19 +1.0 436,656 + ABID97_RS02165 0.21 +1.0 436,656 + ABID97_RS02165 0.21 +0.6 436,656 + ABID97_RS02165 0.21 +1.6 436,657 - ABID97_RS02165 0.21 +0.9 436,657 - ABID97_RS02165 0.21 +0.8 436,747 + ABID97_RS02165 0.29 +0.5 436,747 + ABID97_RS02165 0.29 +2.0 436,748 - ABID97_RS02165 0.29 +1.0 436,748 - ABID97_RS02165 0.29 +1.1 436,748 - ABID97_RS02165 0.29 +2.1 436,748 - ABID97_RS02165 0.29 -0.5 436,771 - ABID97_RS02165 0.31 +0.2 436,966 + ABID97_RS02165 0.49 +0.4 436,966 + ABID97_RS02165 0.49 +1.1 436,966 + ABID97_RS02165 0.49 +0.6 436,967 - ABID97_RS02165 0.49 +0.7 436,967 - ABID97_RS02165 0.49 +0.9 436,967 - ABID97_RS02165 0.49 +0.4 437,206 + ABID97_RS02165 0.71 +0.5 437,206 + ABID97_RS02165 0.71 +1.2 437,206 + ABID97_RS02165 0.71 +1.2 437,206 + ABID97_RS02165 0.71 +0.7 437,207 - ABID97_RS02165 0.71 +0.8 437,207 - ABID97_RS02165 0.71 +0.9 437,207 - ABID97_RS02165 0.71 +0.8 437,253 + ABID97_RS02165 0.75 +1.1 437,298 + ABID97_RS02165 0.79 +1.0 437,299 - ABID97_RS02165 0.79 +1.6
Or see this region's nucleotide sequence