Experiment: L-tyrosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS20210 and ABID97_RS20215 overlap by 1 nucleotides ABID97_RS20215 and ABID97_RS20220 are separated by 12 nucleotides ABID97_RS20220 and ABID97_RS20225 are separated by 34 nucleotides ABID97_RS20225 and ABID97_RS20230 are separated by 39 nucleotides
ABID97_RS20210: ABID97_RS20210 - ATP-binding protein, at 4,173,602 to 4,174,300
_RS20210
ABID97_RS20215: ABID97_RS20215 - hypothetical protein, at 4,174,300 to 4,175,277
_RS20215
ABID97_RS20220: ABID97_RS20220 - Hsp33 family molecular chaperone HslO, at 4,175,290 to 4,176,297
_RS20220
ABID97_RS20225: ABID97_RS20225 - gamma carbonic anhydrase family protein, at 4,176,332 to 4,176,856
_RS20225
ABID97_RS20230: ABID97_RS20230 - ferritin-like domain-containing protein, at 4,176,896 to 4,177,711
_RS20230
Position (kb) 4175
4176
4177 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 4174.511 kb on - strand, within ABID97_RS20215 at 4174.849 kb on + strand, within ABID97_RS20215 at 4174.849 kb on + strand, within ABID97_RS20215 at 4174.850 kb on - strand, within ABID97_RS20215 at 4175.077 kb on + strand, within ABID97_RS20215 at 4175.077 kb on + strand, within ABID97_RS20215 at 4175.077 kb on + strand, within ABID97_RS20215 at 4175.077 kb on + strand, within ABID97_RS20215 at 4175.078 kb on - strand, within ABID97_RS20215 at 4175.078 kb on - strand, within ABID97_RS20215 at 4175.078 kb on - strand, within ABID97_RS20215 at 4175.078 kb on - strand, within ABID97_RS20215 at 4175.078 kb on - strand, within ABID97_RS20215 at 4175.078 kb on - strand, within ABID97_RS20215 at 4175.147 kb on + strand, within ABID97_RS20215 at 4175.148 kb on - strand, within ABID97_RS20215 at 4175.291 kb on + strand at 4175.636 kb on + strand, within ABID97_RS20220 at 4175.637 kb on - strand, within ABID97_RS20220 at 4175.637 kb on - strand, within ABID97_RS20220 at 4175.819 kb on + strand, within ABID97_RS20220 at 4175.819 kb on + strand, within ABID97_RS20220 at 4175.819 kb on + strand, within ABID97_RS20220 at 4175.820 kb on - strand, within ABID97_RS20220 at 4175.820 kb on - strand, within ABID97_RS20220 at 4175.820 kb on - strand, within ABID97_RS20220 at 4175.820 kb on - strand, within ABID97_RS20220 at 4175.820 kb on - strand, within ABID97_RS20220 at 4175.892 kb on - strand, within ABID97_RS20220 at 4176.177 kb on - strand, within ABID97_RS20220 at 4176.177 kb on - strand, within ABID97_RS20220 at 4176.381 kb on + strand at 4176.381 kb on + strand at 4176.381 kb on + strand at 4176.381 kb on + strand at 4176.892 kb on - strand at 4176.999 kb on + strand, within ABID97_RS20230 at 4177.000 kb on - strand, within ABID97_RS20230 at 4177.014 kb on + strand, within ABID97_RS20230 at 4177.015 kb on - strand, within ABID97_RS20230 at 4177.131 kb on + strand, within ABID97_RS20230 at 4177.215 kb on - strand, within ABID97_RS20230 at 4177.215 kb on - strand, within ABID97_RS20230 at 4177.215 kb on - strand, within ABID97_RS20230
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (C) remove 4,174,511 - ABID97_RS20215 0.22 -1.2 4,174,849 + ABID97_RS20215 0.56 -0.8 4,174,849 + ABID97_RS20215 0.56 -0.8 4,174,850 - ABID97_RS20215 0.56 +0.4 4,175,077 + ABID97_RS20215 0.79 +0.2 4,175,077 + ABID97_RS20215 0.79 +0.5 4,175,077 + ABID97_RS20215 0.79 -0.4 4,175,077 + ABID97_RS20215 0.79 +0.2 4,175,078 - ABID97_RS20215 0.80 -2.0 4,175,078 - ABID97_RS20215 0.80 -1.4 4,175,078 - ABID97_RS20215 0.80 -0.5 4,175,078 - ABID97_RS20215 0.80 +0.1 4,175,078 - ABID97_RS20215 0.80 -1.3 4,175,078 - ABID97_RS20215 0.80 -0.4 4,175,147 + ABID97_RS20215 0.87 -3.0 4,175,148 - ABID97_RS20215 0.87 -1.7 4,175,291 + -1.0 4,175,636 + ABID97_RS20220 0.34 +0.6 4,175,637 - ABID97_RS20220 0.34 +0.1 4,175,637 - ABID97_RS20220 0.34 +0.5 4,175,819 + ABID97_RS20220 0.52 -0.1 4,175,819 + ABID97_RS20220 0.52 -0.7 4,175,819 + ABID97_RS20220 0.52 +1.0 4,175,820 - ABID97_RS20220 0.53 -0.1 4,175,820 - ABID97_RS20220 0.53 +1.3 4,175,820 - ABID97_RS20220 0.53 +0.4 4,175,820 - ABID97_RS20220 0.53 +1.6 4,175,820 - ABID97_RS20220 0.53 +0.3 4,175,892 - ABID97_RS20220 0.60 -3.2 4,176,177 - ABID97_RS20220 0.88 +0.0 4,176,177 - ABID97_RS20220 0.88 -2.6 4,176,381 + +0.6 4,176,381 + -1.0 4,176,381 + +0.6 4,176,381 + -0.2 4,176,892 - -0.0 4,176,999 + ABID97_RS20230 0.13 -0.9 4,177,000 - ABID97_RS20230 0.13 -0.3 4,177,014 + ABID97_RS20230 0.14 -0.8 4,177,015 - ABID97_RS20230 0.15 +0.2 4,177,131 + ABID97_RS20230 0.29 -0.2 4,177,215 - ABID97_RS20230 0.39 -0.3 4,177,215 - ABID97_RS20230 0.39 -0.3 4,177,215 - ABID97_RS20230 0.39 -1.9
Or see this region's nucleotide sequence